RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 SEC16BQ96JE7 1060 aa4.84□□□□□ -1.63
GPNMB-212ENST00000487890 EHD4Q9H223 541 aa4.84□□□□□ -1.63
GPNMB-212ENST00000487890 RUBCNLQ9H714 662 aa4.84□□□□□ -1.63
GPNMB-212ENST00000487890 GPAMQ9HCL2 828 aa4.84□□□□□ -1.63
GPNMB-212ENST00000487890 PPP4R2Q9NY27 417 aa4.84□□□□□ -1.63
GPNMB-212ENST00000487890 KANSL3Q9P2N6 904 aa4.84□□□□□ -1.63
GPNMB-212ENST00000487890 SALL4Q9UJQ4 1053 aa4.84□□□□□ -1.63
GPNMB-212ENST00000487890 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.84□□□□□ -1.63
GPNMB-212ENST00000487890 EFR3BQ9Y2G0 817 aa4.84□□□□□ -1.63
GPNMB-212ENST00000487890 GJA3Q9Y6H8 435 aa4.84□□□□□ -1.63
GPNMB-212ENST00000487890 KDM6BO15054 1643 aa4.83□□□□□ -1.64
GPNMB-212ENST00000487890 ZCCHC11Q5TAX3 1644 aaKnown RBP4.83□□□□□ -1.64
GPNMB-212ENST00000487890 ABCC2Q92887 1545 aa4.83□□□□□ -1.64
GPNMB-212ENST00000487890 DISP1Q96F81 1524 aa4.83□□□□□ -1.64
GPNMB-212ENST00000487890 UGGT2Q9NYU1 1516 aa4.83□□□□□ -1.64
GPNMB-212ENST00000487890 FIGNL2A6NMB9 653 aa4.83□□□□□ -1.64
GPNMB-212ENST00000487890 FBXO24O75426 580 aa4.83□□□□□ -1.64
GPNMB-212ENST00000487890 UPP2O95045 317 aa4.83□□□□□ -1.64
GPNMB-212ENST00000487890 BMP2P12643 396 aa4.83□□□□□ -1.64
GPNMB-212ENST00000487890 TARSP26639 723 aaKnown RBP4.83□□□□□ -1.64
GPNMB-212ENST00000487890 GBP2P32456 591 aaPredicted RBP4.83□□□□□ -1.64
GPNMB-212ENST00000487890 ETFBP38117 255 aa4.83□□□□□ -1.64
GPNMB-212ENST00000487890 EIF4A3P38919 411 aaKnown RBP4.83□□□□□ -1.64
GPNMB-212ENST00000487890 NASPP49321 788 aaPredicted RBP4.83□□□□□ -1.64
GPNMB-212ENST00000487890 SERINC3Q13530 473 aa4.83□□□□□ -1.64
GPNMB-212ENST00000487890 TCEAL1Q15170 157 aa4.83□□□□□ -1.64
GPNMB-212ENST00000487890 MAP3K11Q16584 847 aa4.83□□□□□ -1.64
GPNMB-212ENST00000487890 IFFO2Q5TF58 517 aa4.83□□□□□ -1.64
GPNMB-212ENST00000487890 FAM9AQ8IZU1 332 aaPredicted RBP4.83□□□□□ -1.64
GPNMB-212ENST00000487890 ZNF296Q8WUU4 475 aaPredicted RBP4.83□□□□□ -1.64
GPNMB-212ENST00000487890 TMEM74Q96NL1 305 aa4.83□□□□□ -1.64
GPNMB-212ENST00000487890 OXCT2Q9BYC2 517 aaPredicted RBP4.83□□□□□ -1.64
GPNMB-212ENST00000487890 ZNF408Q9H9D4 720 aa4.83□□□□□ -1.64
GPNMB-212ENST00000487890 BRD7Q9NPI1 651 aa4.83□□□□□ -1.64
GPNMB-212ENST00000487890 GINM1Q9NU53 330 aa4.83□□□□□ -1.64
GPNMB-212ENST00000487890 TRAK1Q9UPV9 953 aa4.83□□□□□ -1.64
GPNMB-212ENST00000487890 AKAP2Q9Y2D5 859 aa4.83□□□□□ -1.64
GPNMB-212ENST00000487890 MRVI1Q9Y6F6 885 aa4.83□□□□□ -1.64
GPNMB-212ENST00000487890 GOLGA3Q08378 1498 aa4.82□□□□□ -1.64
GPNMB-212ENST00000487890 ASXL2Q76L83 1435 aa4.82□□□□□ -1.64
GPNMB-212ENST00000487890 UACAQ9BZF9 1416 aa4.82□□□□□ -1.64
GPNMB-212ENST00000487890 TMEM238LA0A1B0GVL6 79 aa4.82□□□□□ -1.64
GPNMB-212ENST00000487890 MMP20O60882 483 aa4.82□□□□□ -1.64
GPNMB-212ENST00000487890 SSBP05455 408 aaKnown RBP eCLIP4.82□□□□□ -1.64
GPNMB-212ENST00000487890 EDN3P14138 238 aa4.82□□□□□ -1.64
GPNMB-212ENST00000487890 SFSWAPQ12872 951 aaKnown RBP4.82□□□□□ -1.64
GPNMB-212ENST00000487890 PRPF40BQ6NWY9 871 aaKnown RBP4.82□□□□□ -1.64
GPNMB-212ENST00000487890 FBXL19Q6PCT2 694 aa4.82□□□□□ -1.64
GPNMB-212ENST00000487890 TRIM67Q6ZTA4 783 aa4.82□□□□□ -1.64
GPNMB-212ENST00000487890 KRT25Q7Z3Z0 450 aa4.82□□□□□ -1.64
GPNMB-212ENST00000487890 CKAP2LQ8IYA6 745 aa4.82□□□□□ -1.64
GPNMB-212ENST00000487890 SPACA7Q96KW9 195 aa4.82□□□□□ -1.64
GPNMB-212ENST00000487890 TCF12Q99081 682 aa4.82□□□□□ -1.64
GPNMB-212ENST00000487890 CRISPLD1Q9H336 500 aa4.82□□□□□ -1.64
GPNMB-212ENST00000487890 ABCB6Q9NP58 842 aa4.82□□□□□ -1.64
GPNMB-212ENST00000487890 C11orf16Q9NQ32 467 aa4.82□□□□□ -1.64
GPNMB-212ENST00000487890 PLB1Q6P1J6 1458 aa4.81□□□□□ -1.64
GPNMB-212ENST00000487890 K7ELQ4 463 aaPredicted RBP4.81□□□□□ -1.64
GPNMB-212ENST00000487890 KLF4O43474 513 aa4.81□□□□□ -1.64
GPNMB-212ENST00000487890 TRPA1O75762 1119 aa4.81□□□□□ -1.64
GPNMB-212ENST00000487890 ACPPP15309 386 aa4.81□□□□□ -1.64
GPNMB-212ENST00000487890 GARTP22102 1010 aa4.81□□□□□ -1.64
GPNMB-212ENST00000487890 FAM160A1Q05DH4 1040 aa4.81□□□□□ -1.64
GPNMB-212ENST00000487890 NFX1Q12986 1120 aaKnown RBP4.81□□□□□ -1.64
GPNMB-212ENST00000487890 PWP1Q13610 501 aa4.81□□□□□ -1.64
GPNMB-212ENST00000487890 COL13A1Q5TAT6 717 aaPredicted RBP4.81□□□□□ -1.64
GPNMB-212ENST00000487890 SAMD5Q5TGI4 173 aa4.81□□□□□ -1.64
GPNMB-212ENST00000487890 MRPL14Q6P1L8 145 aaKnown RBP4.81□□□□□ -1.64
GPNMB-212ENST00000487890 PHC3Q8NDX5 983 aa4.81□□□□□ -1.64
GPNMB-212ENST00000487890 OR13H1Q8NG92 308 aa4.81□□□□□ -1.64
GPNMB-212ENST00000487890 ANKRD24Q8TF21 1146 aa4.81□□□□□ -1.64
GPNMB-212ENST00000487890 MRFAP1L1Q96HT8 127 aa4.81□□□□□ -1.64
GPNMB-212ENST00000487890 GSX2Q9BZM3 304 aa4.81□□□□□ -1.64
GPNMB-212ENST00000487890 LIN7BQ9HAP6 207 aa4.81□□□□□ -1.64
GPNMB-212ENST00000487890 ZFATQ9P243 1243 aa4.81□□□□□ -1.64
GPNMB-212ENST00000487890 KCNH4Q9UQ05 1017 aa4.81□□□□□ -1.64
GPNMB-212ENST00000487890 TLR6Q9Y2C9 796 aa4.81□□□□□ -1.64
GPNMB-212ENST00000487890 MRPL42Q9Y6G3 142 aaKnown RBP4.81□□□□□ -1.64
GPNMB-212ENST00000487890 UHRF1BP1LA0JNW5 1464 aa4.81□□□□□ -1.64
GPNMB-212ENST00000487890 PPRC1Q5VV67 1664 aaKnown RBP4.8□□□□□ -1.64
GPNMB-212ENST00000487890 TTLL8A6PVC2 850 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 GREM1O60565 184 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 PF4P02776 101 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 F11P03951 625 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 CELA3AP09093 270 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 SOX9P48436 509 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 KCNQ4P56696 695 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 CCINQ13939 588 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 GRIN2CQ14957 1233 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 NFE2L2Q16236 605 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 NBPF6Q5VWK0 638 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 TPTE2Q6XPS3 522 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 DTHD1Q6ZMT9 781 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 ANKS3Q6ZW76 656 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 SV2BQ7L1I2 683 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 NLRP8Q86W28 1048 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 GPATCH3Q96I76 525 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 RHOVQ96L33 236 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 NBPF4Q96M43 638 aa4.8□□□□□ -1.64
GPNMB-212ENST00000487890 CNTNAP3BQ96NU0 1288 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms