RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 TMEM57Q8N5G2 664 aa11.65□□□□□ -0.54
LCN2-205ENST00000487719 DPF2Q92785 391 aa11.65□□□□□ -0.54
LCN2-205ENST00000487719 KAZALD1Q96I82 304 aa11.65□□□□□ -0.54
LCN2-205ENST00000487719 ADARB2Q9NS39 739 aaKnown RBP11.65□□□□□ -0.54
LCN2-205ENST00000487719 GPRC5DQ9NZD1 345 aa11.65□□□□□ -0.54
LCN2-205ENST00000487719 ARAP2Q8WZ64 1704 aa11.65□□□□□ -0.54
LCN2-205ENST00000487719 YDJCA8MPS7 323 aa11.64□□□□□ -0.55
LCN2-205ENST00000487719 SRGAP3O43295 1099 aa11.64□□□□□ -0.55
LCN2-205ENST00000487719 HSPA6P17066 643 aa11.64□□□□□ -0.55
LCN2-205ENST00000487719 SCNN1DP51172 638 aa11.64□□□□□ -0.55
LCN2-205ENST00000487719 APLP1P51693 650 aa11.64□□□□□ -0.55
LCN2-205ENST00000487719 CAVIN4Q5BKX8 364 aa11.64□□□□□ -0.55
LCN2-205ENST00000487719 AGBL3Q8NEM8 1001 aa11.64□□□□□ -0.55
LCN2-205ENST00000487719 HELBQ8NG08 1087 aaPredicted RBP11.64□□□□□ -0.55
LCN2-205ENST00000487719 ADAMTSL1Q8N6G6 1762 aa11.64□□□□□ -0.55
LCN2-205ENST00000487719 POTECB2RU33 542 aa11.63□□□□□ -0.55
LCN2-205ENST00000487719 EYA2O00167 538 aa11.63□□□□□ -0.55
LCN2-205ENST00000487719 FRAT2O75474 233 aaPredicted RBP11.63□□□□□ -0.55
LCN2-205ENST00000487719 IFIT1P09914 478 aaKnown RBP11.63□□□□□ -0.55
LCN2-205ENST00000487719 MMP14P50281 582 aa11.63□□□□□ -0.55
LCN2-205ENST00000487719 PUM3Q15397 648 aaKnown RBP11.63□□□□□ -0.55
LCN2-205ENST00000487719 C15orf52Q6ZUT6 534 aaKnown RBP11.63□□□□□ -0.55
LCN2-205ENST00000487719 MICALL2Q8IY33 904 aa11.63□□□□□ -0.55
LCN2-205ENST00000487719 OGFOD1Q8N543 542 aa11.63□□□□□ -0.55
LCN2-205ENST00000487719 CNOT7Q9UIV1 285 aaKnown RBP11.63□□□□□ -0.55
LCN2-205ENST00000487719 ZNF646O15015 1829 aaPredicted RBP11.63□□□□□ -0.55
LCN2-205ENST00000487719 ZNF609O15014 1411 aa11.62□□□□□ -0.55
LCN2-205ENST00000487719 CIAO1O76071 339 aa11.62□□□□□ -0.55
LCN2-205ENST00000487719 VIL1P09327 827 aaKnown RBP11.62□□□□□ -0.55
LCN2-205ENST00000487719 SLC5A1P13866 664 aa11.62□□□□□ -0.55
LCN2-205ENST00000487719 IL15P40933 162 aaPredicted RBP11.62□□□□□ -0.55
LCN2-205ENST00000487719 EPS15P42566 896 aa11.62□□□□□ -0.55
LCN2-205ENST00000487719 STRIP1Q5VSL9 837 aa11.62□□□□□ -0.55
LCN2-205ENST00000487719 TTLL5Q6EMB2 1281 aa11.62□□□□□ -0.55
LCN2-205ENST00000487719 RSBN1LQ6PCB5 846 aaPredicted RBP11.62□□□□□ -0.55
LCN2-205ENST00000487719 SIL1Q9H173 461 aa11.62□□□□□ -0.55
LCN2-205ENST00000487719 CEP126Q9P2H0 1117 aa11.62□□□□□ -0.55
LCN2-205ENST00000487719 HDAC9Q9UKV0 1011 aa11.62□□□□□ -0.55
LCN2-205ENST00000487719 DDX19BQ9UMR2 479 aa11.62□□□□□ -0.55
LCN2-205ENST00000487719 RIPOR2Q9Y4F9 1068 aa11.62□□□□□ -0.55
LCN2-205ENST00000487719 PDE8BO95263 885 aa11.61□□□□□ -0.55
LCN2-205ENST00000487719 HIBADHP31937 336 aaKnown RBP11.61□□□□□ -0.55
LCN2-205ENST00000487719 OS9Q13438 667 aaPredicted RBP11.61□□□□□ -0.55
LCN2-205ENST00000487719 LRRC24Q50LG9 513 aa11.61□□□□□ -0.55
LCN2-205ENST00000487719 KLHDC4Q8TBB5 520 aa11.61□□□□□ -0.55
LCN2-205ENST00000487719 PUS3Q9BZE2 481 aaKnown RBP11.61□□□□□ -0.55
LCN2-205ENST00000487719 CD209Q9NNX6 404 aa11.61□□□□□ -0.55
LCN2-205ENST00000487719 ZBTB12Q9Y330 459 aaPredicted RBP11.61□□□□□ -0.55
LCN2-205ENST00000487719 USP17L8P0C7I0 530 aa11.6□□□□□ -0.55
LCN2-205ENST00000487719 PTPN12Q05209 780 aaKnown RBP11.6□□□□□ -0.55
LCN2-205ENST00000487719 G3BP1Q13283 466 aaKnown RBP eCLIP11.6□□□□□ -0.55
LCN2-205ENST00000487719 MTX1Q13505 466 aa11.6□□□□□ -0.55
LCN2-205ENST00000487719 ZC3H15Q8WU90 426 aaKnown RBP11.6□□□□□ -0.55
LCN2-205ENST00000487719 LPIN2Q92539 896 aa11.6□□□□□ -0.55
LCN2-205ENST00000487719 COPRSQ9NQ92 184 aa11.6□□□□□ -0.55
LCN2-205ENST00000487719 GNL3LQ9NVN8 582 aaKnown RBP11.6□□□□□ -0.55
LCN2-205ENST00000487719 TNNQ9UQP3 1299 aa11.6□□□□□ -0.55
LCN2-205ENST00000487719 AKAP2Q9Y2D5 859 aa11.6□□□□□ -0.55
LCN2-205ENST00000487719 AK9Q5TCS8 1911 aa11.6□□□□□ -0.55
LCN2-205ENST00000487719 IL1R1P14778 569 aa11.59□□□□□ -0.55
LCN2-205ENST00000487719 RFX5P48382 616 aaPredicted RBP11.59□□□□□ -0.55
LCN2-205ENST00000487719 GTF2IP78347 998 aa11.59□□□□□ -0.55
LCN2-205ENST00000487719 MVPQ14764 893 aaKnown RBP11.59□□□□□ -0.55
LCN2-205ENST00000487719 KIF4BQ2VIQ3 1234 aa11.59□□□□□ -0.55
LCN2-205ENST00000487719 TXNRD3Q86VQ6 643 aa11.59□□□□□ -0.55
LCN2-205ENST00000487719 CNTROBQ8N137 903 aa11.59□□□□□ -0.55
LCN2-205ENST00000487719 PANK1Q8TE04 598 aa11.59□□□□□ -0.55
LCN2-205ENST00000487719 HMMRO75330 724 aa11.58□□□□□ -0.56
LCN2-205ENST00000487719 RLBP1P12271 317 aa11.58□□□□□ -0.56
LCN2-205ENST00000487719 KLRK1P26718 216 aa11.58□□□□□ -0.56
LCN2-205ENST00000487719 PDE3AQ14432 1141 aa11.58□□□□□ -0.56
LCN2-205ENST00000487719 ATP2B3Q16720 1220 aa11.58□□□□□ -0.56
LCN2-205ENST00000487719 RBM26Q5T8P6 1007 aaKnown RBP11.58□□□□□ -0.56
LCN2-205ENST00000487719 TBC1D22AQ8WUA7 517 aa11.58□□□□□ -0.56
LCN2-205ENST00000487719 DCPSQ96C86 337 aaKnown RBP11.58□□□□□ -0.56
LCN2-205ENST00000487719 KCNQ5Q9NR82 932 aa11.58□□□□□ -0.56
LCN2-205ENST00000487719 WTIPA6NIX2 430 aaPredicted RBP11.57□□□□□ -0.56
LCN2-205ENST00000487719 SNAP23O00161 211 aa11.57□□□□□ -0.56
LCN2-205ENST00000487719 MYO1BO43795 1136 aa11.57□□□□□ -0.56
LCN2-205ENST00000487719 SASH1O94885 1247 aa11.57□□□□□ -0.56
LCN2-205ENST00000487719 POTEIP0CG38 1075 aa11.57□□□□□ -0.56
LCN2-205ENST00000487719 POTEJP0CG39 1038 aa11.57□□□□□ -0.56
LCN2-205ENST00000487719 GYG1P46976 350 aa11.57□□□□□ -0.56
LCN2-205ENST00000487719 FKBP1AP62942 108 aaKnown RBP11.57□□□□□ -0.56
LCN2-205ENST00000487719 TBC1D10BQ4KMP7 808 aaPredicted RBP11.57□□□□□ -0.56
LCN2-205ENST00000487719 DACT2Q5SW24 774 aa11.57□□□□□ -0.56
LCN2-205ENST00000487719 GORABQ5T7V8 394 aa11.57□□□□□ -0.56
LCN2-205ENST00000487719 MAP1SQ66K74 1059 aaPredicted RBP11.57□□□□□ -0.56
LCN2-205ENST00000487719 CDC37L1Q7L3B6 337 aa11.57□□□□□ -0.56
LCN2-205ENST00000487719 SAMD7Q7Z3H4 446 aa11.57□□□□□ -0.56
LCN2-205ENST00000487719 VGLL2Q8N8G2 317 aa11.57□□□□□ -0.56
LCN2-205ENST00000487719 MYOZ2Q9NPC6 264 aa11.57□□□□□ -0.56
LCN2-205ENST00000487719 PA2G4Q9UQ80 394 aaKnown RBP11.57□□□□□ -0.56
LCN2-205ENST00000487719 MYH2Q9UKX2 1941 aa11.56□□□□□ -0.56
LCN2-205ENST00000487719 ZBTB7BO15156 539 aaPredicted RBP11.56□□□□□ -0.56
LCN2-205ENST00000487719 ZNF280AP59817 542 aaPredicted RBP11.56□□□□□ -0.56
LCN2-205ENST00000487719 ATP8B2P98198 1209 aa11.56□□□□□ -0.56
LCN2-205ENST00000487719 HSP90AB4PQ58FF6 505 aa11.56□□□□□ -0.56
LCN2-205ENST00000487719 MFSD14BQ5SR56 506 aa11.56□□□□□ -0.56
LCN2-205ENST00000487719 ATG9AQ7Z3C6 839 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms