RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 OGFOD2Q6N063 350 aa7.93□□□□□ -1.14
UBR3-211ENST00000487689 ETFBKMTQ8IXQ9 262 aa7.93□□□□□ -1.14
UBR3-211ENST00000487689 SHKBP1Q8TBC3 707 aa7.93□□□□□ -1.14
UBR3-211ENST00000487689 KRTAP4-2Q9BYR5 136 aa7.93□□□□□ -1.14
UBR3-211ENST00000487689 STIM2Q9P246 746 aa7.93□□□□□ -1.14
UBR3-211ENST00000487689 LINC01387J3KSC0 135 aa7.92□□□□□ -1.14
UBR3-211ENST00000487689 PCSK2P16519 638 aa7.92□□□□□ -1.14
UBR3-211ENST00000487689 CD68P34810 354 aaPredicted RBP7.92□□□□□ -1.14
UBR3-211ENST00000487689 SCNN1AP37088 669 aa7.92□□□□□ -1.14
UBR3-211ENST00000487689 ZAP70P43403 619 aa7.92□□□□□ -1.14
UBR3-211ENST00000487689 HYAL2Q12891 473 aa7.92□□□□□ -1.14
UBR3-211ENST00000487689 ABI1Q8IZP0 508 aa7.92□□□□□ -1.14
UBR3-211ENST00000487689 CLP1Q92989 425 aaKnown RBP7.92□□□□□ -1.14
UBR3-211ENST00000487689 MYRFLQ96LU7 910 aa7.92□□□□□ -1.14
UBR3-211ENST00000487689 SAP130Q9H0E3 1048 aa7.92□□□□□ -1.14
UBR3-211ENST00000487689 KCNK4Q9NYG8 393 aa7.92□□□□□ -1.14
UBR3-211ENST00000487689 KCNMB2Q9Y691 235 aa7.92□□□□□ -1.14
UBR3-211ENST00000487689 SMNDC1O75940 238 aaKnown RBP eCLIP7.91□□□□□ -1.14
UBR3-211ENST00000487689 RPLP1P05386 114 aaKnown RBP7.91□□□□□ -1.14
UBR3-211ENST00000487689 HOXD8P13378 290 aaPredicted RBP7.9□□□□□ -1.14
UBR3-211ENST00000487689 ATP2B4P23634 1241 aa7.9□□□□□ -1.14
UBR3-211ENST00000487689 FAM69CQ0P6D2 419 aa7.9□□□□□ -1.14
UBR3-211ENST00000487689 TXNDC11Q6PKC3 985 aa7.9□□□□□ -1.14
UBR3-211ENST00000487689 CLEC10AQ8IUN9 316 aa7.9□□□□□ -1.14
UBR3-211ENST00000487689 GPR152Q8TDT2 470 aa7.9□□□□□ -1.14
UBR3-211ENST00000487689 C8AP07357 584 aa7.89□□□□□ -1.15
UBR3-211ENST00000487689 HOXA10P31260 410 aaPredicted RBP7.89□□□□□ -1.15
UBR3-211ENST00000487689 FAM117BQ6P1L5 589 aa7.89□□□□□ -1.15
UBR3-211ENST00000487689 KIAA1211Q6ZU35 1233 aa7.89□□□□□ -1.15
UBR3-211ENST00000487689 FAM20CQ8IXL6 584 aa7.89□□□□□ -1.15
UBR3-211ENST00000487689 FAM83CQ9BQN1 747 aa7.89□□□□□ -1.15
UBR3-211ENST00000487689 OR13H1Q8NG92 308 aa7.88□□□□□ -1.15
UBR3-211ENST00000487689 CARD10Q9BWT7 1032 aa7.88□□□□□ -1.15
UBR3-211ENST00000487689 KCNF1Q9H3M0 494 aa7.88□□□□□ -1.15
UBR3-211ENST00000487689 WDR64B1ANS9 1081 aa7.87□□□□□ -1.15
UBR3-211ENST00000487689 TNFRSF10BO14763 440 aa7.87□□□□□ -1.15
UBR3-211ENST00000487689 CDC25BP30305 580 aa7.87□□□□□ -1.15
UBR3-211ENST00000487689 DUOXA2Q1HG44 320 aa7.87□□□□□ -1.15
UBR3-211ENST00000487689 BEND4Q6ZU67 534 aa7.87□□□□□ -1.15
UBR3-211ENST00000487689 NCAPG2Q86XI2 1143 aa7.87□□□□□ -1.15
UBR3-211ENST00000487689 LACRTQ9GZZ8 138 aa7.87□□□□□ -1.15
UBR3-211ENST00000487689 ABI2Q9NYB9 513 aaPredicted RBP7.87□□□□□ -1.15
UBR3-211ENST00000487689 TM4SF5O14894 197 aa7.86□□□□□ -1.15
UBR3-211ENST00000487689 BMP3P12645 472 aa7.86□□□□□ -1.15
UBR3-211ENST00000487689 SRPK2P78362 688 aaKnown RBP7.86□□□□□ -1.15
UBR3-211ENST00000487689 TRIP4Q15650 581 aaPredicted RBP7.86□□□□□ -1.15
UBR3-211ENST00000487689 CEP135Q66GS9 1140 aa7.86□□□□□ -1.15
UBR3-211ENST00000487689 ZNF438Q7Z4V0 828 aa7.86□□□□□ -1.15
UBR3-211ENST00000487689 POU5F2Q8N7G0 328 aa7.86□□□□□ -1.15
UBR3-211ENST00000487689 ANGEL1Q9UNK9 670 aaKnown RBP7.86□□□□□ -1.15
UBR3-211ENST00000487689 MTMR7Q9Y216 660 aa7.86□□□□□ -1.15
UBR3-211ENST00000487689 CDC27P30260 824 aa7.85□□□□□ -1.15
UBR3-211ENST00000487689 ATP11AP98196 1134 aa7.85□□□□□ -1.15
UBR3-211ENST00000487689 PDE12Q6L8Q7 609 aaKnown RBP7.85□□□□□ -1.15
UBR3-211ENST00000487689 UBASH3BQ8TF42 649 aa7.85□□□□□ -1.15
UBR3-211ENST00000487689 FSCN2O14926 492 aa7.84□□□□□ -1.15
UBR3-211ENST00000487689 DDX3YO15523 660 aaKnown RBP7.84□□□□□ -1.15
UBR3-211ENST00000487689 SART1O43290 800 aaKnown RBP7.84□□□□□ -1.15
UBR3-211ENST00000487689 CABP4P57796 275 aa7.84□□□□□ -1.15
UBR3-211ENST00000487689 AAMPQ13685 434 aa7.84□□□□□ -1.15
UBR3-211ENST00000487689 CAPN12Q6ZSI9 719 aa7.84□□□□□ -1.15
UBR3-211ENST00000487689 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.84□□□□□ -1.15
UBR3-211ENST00000487689 FOXD4L4Q8WXT5 416 aaPredicted RBP7.84□□□□□ -1.15
UBR3-211ENST00000487689 MFSD14AQ96MC6 490 aa7.84□□□□□ -1.15
UBR3-211ENST00000487689 PIM2Q9P1W9 311 aa7.84□□□□□ -1.15
UBR3-211ENST00000487689 PTPRAP18433 802 aa7.83□□□□□ -1.16
UBR3-211ENST00000487689 KLHL23Q8NBE8 558 aa7.83□□□□□ -1.16
UBR3-211ENST00000487689 NUDT16Q96DE0 195 aaKnown RBP7.83□□□□□ -1.16
UBR3-211ENST00000487689 ASIC4Q96FT7 647 aa7.83□□□□□ -1.16
UBR3-211ENST00000487689 GTF3C3Q9Y5Q9 886 aa7.83□□□□□ -1.16
UBR3-211ENST00000487689 ARID3CA6NKF2 412 aa7.82□□□□□ -1.16
UBR3-211ENST00000487689 ADAM11O75078 769 aa7.82□□□□□ -1.16
UBR3-211ENST00000487689 PPP1R15AO75807 674 aaPredicted RBP7.82□□□□□ -1.16
UBR3-211ENST00000487689 PREPP48147 710 aa7.82□□□□□ -1.16
UBR3-211ENST00000487689 DNM1Q05193 864 aaKnown RBP7.82□□□□□ -1.16
UBR3-211ENST00000487689 NOM1Q5C9Z4 860 aaKnown RBP7.82□□□□□ -1.16
UBR3-211ENST00000487689 LCE4AQ5TA78 99 aa7.82□□□□□ -1.16
UBR3-211ENST00000487689 COL13A1Q5TAT6 717 aaPredicted RBP7.82□□□□□ -1.16
UBR3-211ENST00000487689 ALKBH2Q6NS38 261 aa7.82□□□□□ -1.16
UBR3-211ENST00000487689 CBLL1Q75N03 491 aa7.82□□□□□ -1.16
UBR3-211ENST00000487689 HELQQ8TDG4 1101 aa7.82□□□□□ -1.16
UBR3-211ENST00000487689 PMEPA1Q969W9 287 aa7.82□□□□□ -1.16
UBR3-211ENST00000487689 ELP3Q9H9T3 547 aa7.82□□□□□ -1.16
UBR3-211ENST00000487689 C8orf34Q49A92 452 aa7.81□□□□□ -1.16
UBR3-211ENST00000487689 ADAMTSL4Q6UY14 1074 aa7.81□□□□□ -1.16
UBR3-211ENST00000487689 SEPT3Q9UH03 358 aa7.81□□□□□ -1.16
UBR3-211ENST00000487689 CES1P23141 567 aa7.8□□□□□ -1.16
UBR3-211ENST00000487689 ANKRD34AQ69YU3 496 aa7.8□□□□□ -1.16
UBR3-211ENST00000487689 EDEM1Q92611 657 aa7.8□□□□□ -1.16
UBR3-211ENST00000487689 KLHDC7BQ96G42 594 aa7.8□□□□□ -1.16
UBR3-211ENST00000487689 PBX4Q9BYU1 374 aa7.8□□□□□ -1.16
UBR3-211ENST00000487689 RASSF4Q9H2L5 321 aa7.8□□□□□ -1.16
UBR3-211ENST00000487689 ATG3Q9NT62 314 aa7.8□□□□□ -1.16
UBR3-211ENST00000487689 CCDC39Q9UFE4 941 aa7.8□□□□□ -1.16
UBR3-211ENST00000487689 LEMD3Q9Y2U8 911 aa7.8□□□□□ -1.16
UBR3-211ENST00000487689 ZBTB39O15060 712 aa7.79□□□□□ -1.16
UBR3-211ENST00000487689 EPHA1P21709 976 aa7.79□□□□□ -1.16
UBR3-211ENST00000487689 MSMPQ1L6U9 139 aa7.79□□□□□ -1.16
UBR3-211ENST00000487689 FAM26DQ5JW98 314 aa7.79□□□□□ -1.16
UBR3-211ENST00000487689 HIF3AQ9Y2N7 669 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms