RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 AOC3Q16853 763 aa16.43■□□□□ 0.22
COL4A6-207ENST00000487645 RHPN1Q8TCX5 695 aa16.43■□□□□ 0.22
COL4A6-207ENST00000487645 GCC1Q96CN9 775 aa16.43■□□□□ 0.22
COL4A6-207ENST00000487645 IRS2Q9Y4H2 1338 aa16.43■□□□□ 0.22
COL4A6-207ENST00000487645 TIMM10P62072 90 aa16.42■□□□□ 0.22
COL4A6-207ENST00000487645 C9orf131Q5VYM1 1079 aa16.42■□□□□ 0.22
COL4A6-207ENST00000487645 JDP2Q8WYK2 163 aa16.42■□□□□ 0.22
COL4A6-207ENST00000487645 RNF181Q9P0P0 153 aa16.42■□□□□ 0.22
COL4A6-207ENST00000487645 G3V3G9 751 aa16.41■□□□□ 0.22
COL4A6-207ENST00000487645 IGHDP01880 384 aa16.41■□□□□ 0.22
COL4A6-207ENST00000487645 CAVIN4Q5BKX8 364 aa16.41■□□□□ 0.22
COL4A6-207ENST00000487645 DCAF8Q5TAQ9 597 aa16.41■□□□□ 0.22
COL4A6-207ENST00000487645 TXNRD3Q86VQ6 643 aa16.41■□□□□ 0.22
COL4A6-207ENST00000487645 NIM1KQ8IY84 436 aa16.41■□□□□ 0.22
COL4A6-207ENST00000487645 GPR101Q96P66 508 aaPredicted RBP16.41■□□□□ 0.22
COL4A6-207ENST00000487645 COA1Q9GZY4 146 aa16.41■□□□□ 0.22
COL4A6-207ENST00000487645 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.41■□□□□ 0.22
COL4A6-207ENST00000487645 ARAP2Q8WZ64 1704 aa16.41■□□□□ 0.22
COL4A6-207ENST00000487645 ZC3H4Q9UPT8 1303 aaKnown RBP16.41■□□□□ 0.22
COL4A6-207ENST00000487645 A0A1B0GUL7 405 aa16.4■□□□□ 0.22
COL4A6-207ENST00000487645 TNNI3KQ59H18 835 aa16.4■□□□□ 0.22
COL4A6-207ENST00000487645 PODNQ7Z5L7 613 aa16.4■□□□□ 0.22
COL4A6-207ENST00000487645 FBXO33Q7Z6M2 555 aa16.4■□□□□ 0.22
COL4A6-207ENST00000487645 CLASRPQ8N2M8 674 aaKnown RBP16.4■□□□□ 0.22
COL4A6-207ENST00000487645 FAM84BQ96KN1 310 aaPredicted RBP16.4■□□□□ 0.22
COL4A6-207ENST00000487645 LRRCC1Q9C099 1032 aa16.4■□□□□ 0.22
COL4A6-207ENST00000487645 ZNRF3Q9ULT6 936 aa16.4■□□□□ 0.22
COL4A6-207ENST00000487645 FPGT-TNNI3KV9GXZ4 949 aa16.4■□□□□ 0.22
COL4A6-207ENST00000487645 FZD9O00144 591 aa16.39■□□□□ 0.21
COL4A6-207ENST00000487645 APBB1O00213 710 aa16.39■□□□□ 0.21
COL4A6-207ENST00000487645 KLRK1P26718 216 aa16.39■□□□□ 0.21
COL4A6-207ENST00000487645 HIBADHP31937 336 aaKnown RBP16.39■□□□□ 0.21
COL4A6-207ENST00000487645 DOK7Q18PE1 504 aa16.39■□□□□ 0.21
COL4A6-207ENST00000487645 ZNF804AQ7Z570 1209 aa16.39■□□□□ 0.21
COL4A6-207ENST00000487645 SMC5Q8IY18 1101 aa16.39■□□□□ 0.21
COL4A6-207ENST00000487645 NEUROD6Q96NK8 337 aa16.39■□□□□ 0.21
COL4A6-207ENST00000487645 PSME4Q14997 1843 aa16.39■□□□□ 0.21
COL4A6-207ENST00000487645 ZBTB22O15209 634 aa16.38■□□□□ 0.21
COL4A6-207ENST00000487645 ECE2O60344 883 aa16.38■□□□□ 0.21
COL4A6-207ENST00000487645 IL1R1P14778 569 aa16.38■□□□□ 0.21
COL4A6-207ENST00000487645 XAGE2Q96GT9 111 aa16.38■□□□□ 0.21
COL4A6-207ENST00000487645 CD209Q9NNX6 404 aa16.38■□□□□ 0.21
COL4A6-207ENST00000487645 MYH13Q9UKX3 1938 aa16.38■□□□□ 0.21
COL4A6-207ENST00000487645 TIAM2Q8IVF5 1701 aa16.38■□□□□ 0.21
COL4A6-207ENST00000487645 ZNF609O15014 1411 aa16.37■□□□□ 0.21
COL4A6-207ENST00000487645 COL4A5P29400 1685 aa16.37■□□□□ 0.21
COL4A6-207ENST00000487645 SCN9AQ15858 1988 aa16.37■□□□□ 0.21
COL4A6-207ENST00000487645 GYG1P46976 350 aa16.37■□□□□ 0.21
COL4A6-207ENST00000487645 VPS37DQ86XT2 251 aa16.37■□□□□ 0.21
COL4A6-207ENST00000487645 EAF2Q96CJ1 260 aaPredicted RBP16.37■□□□□ 0.21
COL4A6-207ENST00000487645 DBNDD1Q9H9R9 158 aa16.37■□□□□ 0.21
COL4A6-207ENST00000487645 IL1RAPL2Q9NP60 686 aa16.37■□□□□ 0.21
COL4A6-207ENST00000487645 BCAMP50895 628 aa16.36■□□□□ 0.21
COL4A6-207ENST00000487645 EIF6P56537 245 aaKnown RBP16.36■□□□□ 0.21
COL4A6-207ENST00000487645 GORABQ5T7V8 394 aa16.36■□□□□ 0.21
COL4A6-207ENST00000487645 TDRD7Q8NHU6 1098 aaKnown RBP16.36■□□□□ 0.21
COL4A6-207ENST00000487645 GNL3LQ9NVN8 582 aaKnown RBP16.36■□□□□ 0.21
COL4A6-207ENST00000487645 YDJCA8MPS7 323 aa16.35■□□□□ 0.21
COL4A6-207ENST00000487645 IFIT2P09913 472 aaKnown RBP16.35■□□□□ 0.21
COL4A6-207ENST00000487645 ADORA1P30542 326 aa16.35■□□□□ 0.21
COL4A6-207ENST00000487645 TNIP1Q15025 636 aa16.35■□□□□ 0.21
COL4A6-207ENST00000487645 ANKRD45Q5TZF3 282 aa16.35■□□□□ 0.21
COL4A6-207ENST00000487645 AACSQ86V21 672 aa16.35■□□□□ 0.21
COL4A6-207ENST00000487645 ZBTB47Q9UFB7 747 aaPredicted RBP16.35■□□□□ 0.21
COL4A6-207ENST00000487645 SEMA3EO15041 775 aa16.34■□□□□ 0.21
COL4A6-207ENST00000487645 SMARCA5O60264 1052 aaPredicted RBP16.34■□□□□ 0.21
COL4A6-207ENST00000487645 CXCL9Q07325 125 aa16.34■□□□□ 0.21
COL4A6-207ENST00000487645 CCDC158Q5M9N0 1113 aa16.34■□□□□ 0.21
COL4A6-207ENST00000487645 CCDC102BQ68D86 513 aa16.34■□□□□ 0.21
COL4A6-207ENST00000487645 DPY19L2Q6NUT2 758 aa16.34■□□□□ 0.21
COL4A6-207ENST00000487645 CCDC8Q9H0W5 538 aaPredicted RBP16.34■□□□□ 0.21
COL4A6-207ENST00000487645 USP17L3A6NCW0 530 aa16.33■□□□□ 0.2
COL4A6-207ENST00000487645 USP17L4A6NCW7 530 aa16.33■□□□□ 0.2
COL4A6-207ENST00000487645 VIL1P09327 827 aaKnown RBP16.33■□□□□ 0.2
COL4A6-207ENST00000487645 UQCRFS1P1P0C7P4 283 aa16.33■□□□□ 0.2
COL4A6-207ENST00000487645 PHKA1P46020 1223 aa16.33■□□□□ 0.2
COL4A6-207ENST00000487645 STRIP1Q5VSL9 837 aa16.33■□□□□ 0.2
COL4A6-207ENST00000487645 TTLL5Q6EMB2 1281 aa16.33■□□□□ 0.2
COL4A6-207ENST00000487645 CIAPIN1Q6FI81 312 aa16.33■□□□□ 0.2
COL4A6-207ENST00000487645 USP17L1Q7RTZ2 530 aa16.33■□□□□ 0.2
COL4A6-207ENST00000487645 ZNF512BQ96KM6 892 aaPredicted RBP16.33■□□□□ 0.2
COL4A6-207ENST00000487645 DBNDD2Q9BQY9 259 aa16.33■□□□□ 0.2
COL4A6-207ENST00000487645 KCNQ5Q9NR82 932 aa16.33■□□□□ 0.2
COL4A6-207ENST00000487645 PPP4R2Q9NY27 417 aa16.33■□□□□ 0.2
COL4A6-207ENST00000487645 DBNLQ9UJU6 430 aaKnown RBP16.33■□□□□ 0.2
COL4A6-207ENST00000487645 AKAP11Q9UKA4 1901 aa16.33■□□□□ 0.2
COL4A6-207ENST00000487645 GLTPD2A6NH11 291 aa16.32■□□□□ 0.2
COL4A6-207ENST00000487645 ZNF646O15015 1829 aaPredicted RBP16.32■□□□□ 0.2
COL4A6-207ENST00000487645 FRAT2O75474 233 aaPredicted RBP16.32■□□□□ 0.2
COL4A6-207ENST00000487645 RAD17O75943 681 aa16.32■□□□□ 0.2
COL4A6-207ENST00000487645 NUCB1Q02818 461 aa16.32■□□□□ 0.2
COL4A6-207ENST00000487645 FAM205AQ6ZU69 1335 aa16.32■□□□□ 0.2
COL4A6-207ENST00000487645 GPC2Q8N158 579 aa16.32■□□□□ 0.2
COL4A6-207ENST00000487645 CCDC136Q96JN2 1154 aa16.32■□□□□ 0.2
COL4A6-207ENST00000487645 ARID4AP29374 1257 aaPredicted RBP16.31■□□□□ 0.2
COL4A6-207ENST00000487645 FKBP1AP62942 108 aaKnown RBP16.31■□□□□ 0.2
COL4A6-207ENST00000487645 GTF2IP78347 998 aa16.31■□□□□ 0.2
COL4A6-207ENST00000487645 B4GALNT3Q6L9W6 998 aa16.31■□□□□ 0.2
COL4A6-207ENST00000487645 CENPQQ7L2Z9 268 aaPredicted RBP16.31■□□□□ 0.2
COL4A6-207ENST00000487645 TLR7Q9NYK1 1049 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms