RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 RBM26Q5T8P6 1007 aaKnown RBP25.7■■□□□ 1.7
HDAC4-209ENST00000487617 ANKRD44Q8N8A2 993 aa25.7■■□□□ 1.7
HDAC4-209ENST00000487617 AGBL3Q8NEM8 1001 aa25.7■■□□□ 1.7
HDAC4-209ENST00000487617 PGAP2Q9UHJ9 254 aa25.7■■□□□ 1.7
HDAC4-209ENST00000487617 KIF16BQ96L93 1317 aa25.69■■□□□ 1.7
HDAC4-209ENST00000487617 TRAF5O00463 557 aa25.69■■□□□ 1.7
HDAC4-209ENST00000487617 FMR1Q06787 632 aaKnown RBP eCLIP25.69■■□□□ 1.7
HDAC4-209ENST00000487617 JMYQ8N9B5 988 aa25.69■■□□□ 1.7
HDAC4-209ENST00000487617 FBXW7Q969H0 707 aa25.69■■□□□ 1.7
HDAC4-209ENST00000487617 MKRN1Q9UHC7 482 aaKnown RBP25.69■■□□□ 1.7
HDAC4-209ENST00000487617 EGFRP00533 1210 aa25.68■■□□□ 1.7
HDAC4-209ENST00000487617 GLIS2Q9BZE0 524 aaPredicted RBP25.67■■□□□ 1.7
HDAC4-209ENST00000487617 PUS3Q9BZE2 481 aaKnown RBP25.67■■□□□ 1.7
HDAC4-209ENST00000487617 ZNF609O15014 1411 aa25.66■■□□□ 1.7
HDAC4-209ENST00000487617 KIF4BQ2VIQ3 1234 aa25.66■■□□□ 1.7
HDAC4-209ENST00000487617 ARHGAP45Q92619 1136 aa25.66■■□□□ 1.7
HDAC4-209ENST00000487617 GMLQ99445 158 aa25.66■■□□□ 1.7
HDAC4-209ENST00000487617 USP17L8P0C7I0 530 aa25.65■■□□□ 1.7
HDAC4-209ENST00000487617 ZNF280AP59817 542 aaPredicted RBP25.65■■□□□ 1.7
HDAC4-209ENST00000487617 DACT2Q5SW24 774 aa25.65■■□□□ 1.7
HDAC4-209ENST00000487617 STRIP1Q5VSL9 837 aa25.65■■□□□ 1.7
HDAC4-209ENST00000487617 C15orf52Q6ZUT6 534 aaKnown RBP25.65■■□□□ 1.7
HDAC4-209ENST00000487617 CDC37L1Q7L3B6 337 aa25.65■■□□□ 1.7
HDAC4-209ENST00000487617 MXD3Q9BW11 206 aa25.65■■□□□ 1.7
HDAC4-209ENST00000487617 UBTFL1P0CB47 393 aaPredicted RBP25.64■■□□□ 1.7
HDAC4-209ENST00000487617 TTLL5Q6EMB2 1281 aa25.64■■□□□ 1.7
HDAC4-209ENST00000487617 CD209Q9NNX6 404 aa25.64■■□□□ 1.7
HDAC4-209ENST00000487617 ABT1Q9ULW3 272 aaKnown RBP25.64■■□□□ 1.7
HDAC4-209ENST00000487617 CNTNAP1P78357 1384 aa25.64■■□□□ 1.69
HDAC4-209ENST00000487617 IRS2Q9Y4H2 1338 aa25.63■■□□□ 1.69
HDAC4-209ENST00000487617 ZNF804AQ7Z570 1209 aa25.63■■□□□ 1.69
HDAC4-209ENST00000487617 RIPOR2Q9Y4F9 1068 aa25.63■■□□□ 1.69
HDAC4-209ENST00000487617 IPO8O15397 1037 aaKnown RBP25.62■■□□□ 1.69
HDAC4-209ENST00000487617 BCAR3O75815 825 aa25.62■■□□□ 1.69
HDAC4-209ENST00000487617 GTF2IP78347 998 aa25.62■■□□□ 1.69
HDAC4-209ENST00000487617 CST9Q5W186 159 aa25.62■■□□□ 1.69
HDAC4-209ENST00000487617 USP48Q86UV5 1035 aa25.62■■□□□ 1.69
HDAC4-209ENST00000487617 DCPSQ96C86 337 aaKnown RBP25.62■■□□□ 1.69
HDAC4-209ENST00000487617 MROH5Q6ZUA9 1318 aa25.62■■□□□ 1.69
HDAC4-209ENST00000487617 MYO3BQ8WXR4 1341 aa25.62■■□□□ 1.69
HDAC4-209ENST00000487617 CELF2O95319 508 aaKnown RBP25.61■■□□□ 1.69
HDAC4-209ENST00000487617 UBE4AQ14139 1066 aa25.61■■□□□ 1.69
HDAC4-209ENST00000487617 LRRC24Q50LG9 513 aa25.61■■□□□ 1.69
HDAC4-209ENST00000487617 FRAT1Q92837 279 aaPredicted RBP25.61■■□□□ 1.69
HDAC4-209ENST00000487617 MYOZ2Q9NPC6 264 aa25.61■■□□□ 1.69
HDAC4-209ENST00000487617 KRT26Q7Z3Y9 468 aa25.6■■□□□ 1.69
HDAC4-209ENST00000487617 KLHDC4Q8TBB5 520 aa25.6■■□□□ 1.69
HDAC4-209ENST00000487617 PSME4Q14997 1843 aa25.6■■□□□ 1.69
HDAC4-209ENST00000487617 ZBED9Q6R2W3 1325 aa25.6■■□□□ 1.69
HDAC4-209ENST00000487617 RASSF10A6NK89 507 aa25.59■■□□□ 1.69
HDAC4-209ENST00000487617 DEFB115Q30KQ5 88 aa25.59■■□□□ 1.69
HDAC4-209ENST00000487617 METTL24Q5JXM2 366 aa25.59■■□□□ 1.69
HDAC4-209ENST00000487617 INTS3Q68E01 1043 aaKnown RBP25.59■■□□□ 1.69
HDAC4-209ENST00000487617 OGFOD1Q8N543 542 aa25.59■■□□□ 1.69
HDAC4-209ENST00000487617 ZNF408Q9H9D4 720 aa25.59■■□□□ 1.69
HDAC4-209ENST00000487617 GGA3Q9NZ52 723 aa25.59■■□□□ 1.69
HDAC4-209ENST00000487617 HDAC5Q9UQL6 1122 aa25.59■■□□□ 1.69
HDAC4-209ENST00000487617 IL1R1P14778 569 aa25.58■■□□□ 1.69
HDAC4-209ENST00000487617 VEGFBP49765 207 aa25.58■■□□□ 1.69
HDAC4-209ENST00000487617 SCARF1Q14162 830 aa25.58■■□□□ 1.69
HDAC4-209ENST00000487617 ASTN2O75129 1339 aaPredicted RBP25.58■■□□□ 1.69
HDAC4-209ENST00000487617 A0A1B0GUL6 1792 aa25.57■■□□□ 1.68
HDAC4-209ENST00000487617 TRIM27P14373 513 aa25.57■■□□□ 1.68
HDAC4-209ENST00000487617 ATF7IPQ6VMQ6 1270 aa25.57■■□□□ 1.68
HDAC4-209ENST00000487617 MEIS3Q99687 375 aa25.57■■□□□ 1.68
HDAC4-209ENST00000487617 LRRFIP2Q9Y608 721 aaKnown RBP25.57■■□□□ 1.68
HDAC4-209ENST00000487617 ADM5C9JUS6 153 aa25.56■■□□□ 1.68
HDAC4-209ENST00000487617 RFX5P48382 616 aaPredicted RBP25.56■■□□□ 1.68
HDAC4-209ENST00000487617 DLK2Q6UY11 383 aa25.56■■□□□ 1.68
HDAC4-209ENST00000487617 KIAA0825Q8IV33 1275 aa25.56■■□□□ 1.68
HDAC4-209ENST00000487617 SULF1Q8IWU6 871 aa25.56■■□□□ 1.68
HDAC4-209ENST00000487617 TLL2Q9Y6L7 1015 aa25.56■■□□□ 1.68
HDAC4-209ENST00000487617 HIBADHP31937 336 aaKnown RBP25.55■■□□□ 1.68
HDAC4-209ENST00000487617 GYG1P46976 350 aa25.55■■□□□ 1.68
HDAC4-209ENST00000487617 ANGEL2Q5VTE6 544 aaKnown RBP25.55■■□□□ 1.68
HDAC4-209ENST00000487617 HDAC9Q9UKV0 1011 aa25.55■■□□□ 1.68
HDAC4-209ENST00000487617 TNNQ9UQP3 1299 aa25.55■■□□□ 1.68
HDAC4-209ENST00000487617 PTPN12Q05209 780 aaKnown RBP25.54■■□□□ 1.68
HDAC4-209ENST00000487617 PAXIP1Q6ZW49 1069 aaPredicted RBP25.54■■□□□ 1.68
HDAC4-209ENST00000487617 CLUAP1Q96AJ1 413 aa25.54■■□□□ 1.68
HDAC4-209ENST00000487617 EYA2O00167 538 aa25.53■■□□□ 1.68
HDAC4-209ENST00000487617 PDE8BO95263 885 aa25.53■■□□□ 1.68
HDAC4-209ENST00000487617 GNAI3P08754 354 aa25.53■■□□□ 1.68
HDAC4-209ENST00000487617 MMP14P50281 582 aa25.53■■□□□ 1.68
HDAC4-209ENST00000487617 VGLL2Q8N8G2 317 aa25.53■■□□□ 1.68
HDAC4-209ENST00000487617 FAM84BQ96KN1 310 aaPredicted RBP25.53■■□□□ 1.68
HDAC4-209ENST00000487617 JAG2Q9Y219 1238 aa25.53■■□□□ 1.68
HDAC4-209ENST00000487617 TRPM7Q96QT4 1865 aa25.53■■□□□ 1.68
HDAC4-209ENST00000487617 HSPA1AP0DMV8 641 aaKnown RBP25.52■■□□□ 1.68
HDAC4-209ENST00000487617 HSPA1BP0DMV9 641 aaKnown RBP25.52■■□□□ 1.68
HDAC4-209ENST00000487617 NBPF9Q3BBW0 867 aa25.52■■□□□ 1.68
HDAC4-209ENST00000487617 ZKSCAN2Q63HK3 967 aa25.52■■□□□ 1.68
HDAC4-209ENST00000487617 CERS5Q8N5B7 392 aa25.52■■□□□ 1.68
HDAC4-209ENST00000487617 SASH1O94885 1247 aa25.51■■□□□ 1.67
HDAC4-209ENST00000487617 SAPCD2Q86UD0 394 aa25.51■■□□□ 1.67
HDAC4-209ENST00000487617 VPS37DQ86XT2 251 aa25.51■■□□□ 1.67
HDAC4-209ENST00000487617 TDRD7Q8NHU6 1098 aaKnown RBP25.51■■□□□ 1.67
HDAC4-209ENST00000487617 WDR33Q9C0J8 1336 aaKnown RBP25.51■■□□□ 1.67
HDAC4-209ENST00000487617 ZNF646O15015 1829 aaPredicted RBP25.51■■□□□ 1.67
HDAC4-209ENST00000487617 WNT10BO00744 389 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms