RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-218ENST00000487565 TRIM47Q96LD4 638 aa9.9□□□□□ -0.82
GARNL3-218ENST00000487565 KDM3BQ7LBC6 1761 aa9.9□□□□□ -0.82
GARNL3-218ENST00000487565 VIRMAQ69YN4 1812 aaKnown RBP9.89□□□□□ -0.83
GARNL3-218ENST00000487565 TRIM46Q7Z4K8 759 aa9.89□□□□□ -0.83
GARNL3-218ENST00000487565 SYTL4Q96C24 671 aaPredicted RBP9.89□□□□□ -0.83
GARNL3-218ENST00000487565 SLC10A4Q96EP9 437 aa9.89□□□□□ -0.83
GARNL3-218ENST00000487565 TRIM34Q9BYJ4 488 aa9.89□□□□□ -0.83
GARNL3-218ENST00000487565 MBIPQ9NS73 344 aa9.89□□□□□ -0.83
GARNL3-218ENST00000487565 BABAM1Q9NWV8 329 aa9.89□□□□□ -0.83
GARNL3-218ENST00000487565 GPSM3Q9Y4H4 160 aa9.89□□□□□ -0.83
GARNL3-218ENST00000487565 BRWD3Q6RI45 1802 aa9.89□□□□□ -0.83
GARNL3-218ENST00000487565 BTBD11A6QL63 1104 aa9.88□□□□□ -0.83
GARNL3-218ENST00000487565 CHL1O00533 1208 aa9.88□□□□□ -0.83
GARNL3-218ENST00000487565 ZIC2O95409 532 aaPredicted RBP9.88□□□□□ -0.83
GARNL3-218ENST00000487565 ZNF853P0CG23 659 aa9.88□□□□□ -0.83
GARNL3-218ENST00000487565 SNRPBP14678 240 aaKnown RBP9.88□□□□□ -0.83
GARNL3-218ENST00000487565 DUSP27Q5VZP5 1158 aa9.88□□□□□ -0.83
GARNL3-218ENST00000487565 TTC5Q8N0Z6 440 aa9.88□□□□□ -0.83
GARNL3-218ENST00000487565 ACSBG1Q96GR2 724 aa9.88□□□□□ -0.83
GARNL3-218ENST00000487565 KLF16Q9BXK1 252 aaPredicted RBP9.88□□□□□ -0.83
GARNL3-218ENST00000487565 NFATC2IPQ8NCF5 419 aa9.87□□□□□ -0.83
GARNL3-218ENST00000487565 ADAM32Q8TC27 787 aa9.87□□□□□ -0.83
GARNL3-218ENST00000487565 ITPKCQ96DU7 683 aa9.87□□□□□ -0.83
GARNL3-218ENST00000487565 OCSTAMPQ9BR26 566 aa9.87□□□□□ -0.83
GARNL3-218ENST00000487565 ZFAND3Q9H8U3 227 aa9.87□□□□□ -0.83
GARNL3-218ENST00000487565 FAM182BQ5T319 152 aa9.86□□□□□ -0.83
GARNL3-218ENST00000487565 FAM196AQ6ZSG2 479 aa9.86□□□□□ -0.83
GARNL3-218ENST00000487565 TRMT2AQ8IZ69 625 aaKnown RBP9.86□□□□□ -0.83
GARNL3-218ENST00000487565 PIGBQ92521 554 aa9.86□□□□□ -0.83
GARNL3-218ENST00000487565 MIS18AQ9NYP9 233 aa9.86□□□□□ -0.83
GARNL3-218ENST00000487565 CDV3Q9UKY7 258 aaKnown RBP9.86□□□□□ -0.83
GARNL3-218ENST00000487565 KCPQ6ZWJ8 1503 aa9.86□□□□□ -0.83
GARNL3-218ENST00000487565 UBR2Q8IWV8 1755 aa9.86□□□□□ -0.83
GARNL3-218ENST00000487565 ITGB4P16144 1822 aa9.85□□□□□ -0.83
GARNL3-218ENST00000487565 EXOSC9Q06265 439 aaKnown RBP9.85□□□□□ -0.83
GARNL3-218ENST00000487565 SCARF1Q14162 830 aa9.85□□□□□ -0.83
GARNL3-218ENST00000487565 MRPL14Q6P1L8 145 aaKnown RBP9.85□□□□□ -0.83
GARNL3-218ENST00000487565 ZNF790Q6PG37 636 aa9.85□□□□□ -0.83
GARNL3-218ENST00000487565 CCDC116Q8IYX3 515 aa9.85□□□□□ -0.83
GARNL3-218ENST00000487565 BANK1Q8NDB2 785 aa9.85□□□□□ -0.83
GARNL3-218ENST00000487565 PALLDQ8WX93 1383 aa9.85□□□□□ -0.83
GARNL3-218ENST00000487565 CT47B1P0C2W7 299 aaPredicted RBP9.84□□□□□ -0.83
GARNL3-218ENST00000487565 SLC39A6Q13433 755 aa9.84□□□□□ -0.83
GARNL3-218ENST00000487565 FMNL2Q96PY5 1086 aa9.84□□□□□ -0.83
GARNL3-218ENST00000487565 KCTD15Q96SI1 283 aaPredicted RBP9.84□□□□□ -0.83
GARNL3-218ENST00000487565 BTAF1O14981 1849 aa9.84□□□□□ -0.83
GARNL3-218ENST00000487565 SOS1Q07889 1333 aaPredicted RBP9.83□□□□□ -0.84
GARNL3-218ENST00000487565 LAMB4A4D0S4 1761 aa9.83□□□□□ -0.84
GARNL3-218ENST00000487565 KCNQ3O43525 872 aa9.83□□□□□ -0.84
GARNL3-218ENST00000487565 KCNQ2O43526 872 aa9.83□□□□□ -0.84
GARNL3-218ENST00000487565 HOXB7P09629 217 aa9.83□□□□□ -0.84
GARNL3-218ENST00000487565 EIF4A1P60842 406 aaKnown RBP9.83□□□□□ -0.84
GARNL3-218ENST00000487565 KRT24Q2M2I5 525 aa9.83□□□□□ -0.84
GARNL3-218ENST00000487565 TWISTNBQ3B726 338 aaPredicted RBP9.83□□□□□ -0.84
GARNL3-218ENST00000487565 SMARCC1Q92922 1105 aaPredicted RBP9.83□□□□□ -0.84
GARNL3-218ENST00000487565 ZFP42Q96MM3 310 aa9.83□□□□□ -0.84
GARNL3-218ENST00000487565 PTCD1O75127 700 aaKnown RBP9.82□□□□□ -0.84
GARNL3-218ENST00000487565 DZIP3Q86Y13 1208 aaKnown RBP9.82□□□□□ -0.84
GARNL3-218ENST00000487565 C8orf58Q8NAV2 365 aa9.82□□□□□ -0.84
GARNL3-218ENST00000487565 ZNF496Q96IT1 587 aaPredicted RBP9.82□□□□□ -0.84
GARNL3-218ENST00000487565 PURBQ96QR8 312 aaKnown RBP9.82□□□□□ -0.84
GARNL3-218ENST00000487565 ATG3Q9NT62 314 aa9.82□□□□□ -0.84
GARNL3-218ENST00000487565 ASAP1Q9ULH1 1129 aa9.82□□□□□ -0.84
GARNL3-218ENST00000487565 HEG1Q9ULI3 1381 aa9.82□□□□□ -0.84
GARNL3-218ENST00000487565 C5P01031 1676 aa9.82□□□□□ -0.84
GARNL3-218ENST00000487565 SBF2Q86WG5 1849 aa9.82□□□□□ -0.84
GARNL3-218ENST00000487565 TNS1Q9HBL0 1735 aaKnown RBP9.82□□□□□ -0.84
GARNL3-218ENST00000487565 CICQ96RK0 1608 aaPredicted RBP9.82□□□□□ -0.84
GARNL3-218ENST00000487565 ELL2O00472 640 aaPredicted RBP9.81□□□□□ -0.84
GARNL3-218ENST00000487565 TRIM37O94972 964 aa9.81□□□□□ -0.84
GARNL3-218ENST00000487565 TSPYL6Q8N831 410 aa9.81□□□□□ -0.84
GARNL3-218ENST00000487565 PGPEP1Q9NXJ5 209 aa9.81□□□□□ -0.84
GARNL3-218ENST00000487565 RCAN3Q9UKA8 241 aa9.81□□□□□ -0.84
GARNL3-218ENST00000487565 TJP1Q07157 1748 aa9.8□□□□□ -0.84
GARNL3-218ENST00000487565 UPP2O95045 317 aa9.8□□□□□ -0.84
GARNL3-218ENST00000487565 SNRPA1P09661 255 aaKnown RBP9.8□□□□□ -0.84
GARNL3-218ENST00000487565 NBPF20Q3BBV1 942 aa9.8□□□□□ -0.84
GARNL3-218ENST00000487565 C6orf118Q5T5N4 469 aa9.8□□□□□ -0.84
GARNL3-218ENST00000487565 PPP1R26Q5T8A7 1209 aaPredicted RBP9.8□□□□□ -0.84
GARNL3-218ENST00000487565 HDGFL1Q5TGJ6 251 aa9.8□□□□□ -0.84
GARNL3-218ENST00000487565 MTMR14Q8NCE2 650 aa9.8□□□□□ -0.84
GARNL3-218ENST00000487565 ZNF428Q96B54 188 aa9.8□□□□□ -0.84
GARNL3-218ENST00000487565 CHMP4AQ9BY43 222 aa9.8□□□□□ -0.84
GARNL3-218ENST00000487565 SNRKQ9NRH2 765 aa9.8□□□□□ -0.84
GARNL3-218ENST00000487565 SMC4Q9NTJ3 1288 aa9.8□□□□□ -0.84
GARNL3-218ENST00000487565 LOC102724428A0A0B4J2F2 783 aa9.79□□□□□ -0.84
GARNL3-218ENST00000487565 ZBBXA8MT70 800 aa9.79□□□□□ -0.84
GARNL3-218ENST00000487565 APBB1O00213 710 aa9.79□□□□□ -0.84
GARNL3-218ENST00000487565 GIGYF1O75420 1035 aaPredicted RBP9.79□□□□□ -0.84
GARNL3-218ENST00000487565 SIK1P57059 783 aa9.79□□□□□ -0.84
GARNL3-218ENST00000487565 DHX9Q08211 1270 aaKnown RBP9.79□□□□□ -0.84
GARNL3-218ENST00000487565 INTS6LQ5JSJ4 861 aaKnown RBP9.79□□□□□ -0.84
GARNL3-218ENST00000487565 PTF1AQ7RTS3 328 aa9.79□□□□□ -0.84
GARNL3-218ENST00000487565 MEIOBQ8N635 442 aa9.79□□□□□ -0.84
GARNL3-218ENST00000487565 STK31Q9BXU1 1019 aa9.79□□□□□ -0.84
GARNL3-218ENST00000487565 KIF16BQ96L93 1317 aa9.79□□□□□ -0.84
GARNL3-218ENST00000487565 RGPD3A6NKT7 1758 aaPredicted RBP9.78□□□□□ -0.84
GARNL3-218ENST00000487565 RGPD4Q7Z3J3 1758 aa9.78□□□□□ -0.84
GARNL3-218ENST00000487565 ZNF831Q5JPB2 1677 aa9.78□□□□□ -0.84
GARNL3-218ENST00000487565 VAMP4O75379 141 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms