RNA–Protein interactions for RNA: ENST00000487427.5

ITSN1-229, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 805 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-229ENST00000487427 FMR1Q06787 632 aaKnown RBP eCLIP15.71■□□□□ 0.11
ITSN1-229ENST00000487427 DEFB115Q30KQ5 88 aa15.71■□□□□ 0.11
ITSN1-229ENST00000487427 TBC1D10BQ4KMP7 808 aaPredicted RBP15.71■□□□□ 0.11
ITSN1-229ENST00000487427 CST9Q5W186 159 aa15.71■□□□□ 0.11
ITSN1-229ENST00000487427 LDHAL6AQ6ZMR3 332 aa15.71■□□□□ 0.11
ITSN1-229ENST00000487427 TXNRD3Q86VQ6 643 aa15.71■□□□□ 0.11
ITSN1-229ENST00000487427 GMLQ99445 158 aa15.71■□□□□ 0.11
ITSN1-229ENST00000487427 SMC4Q9NTJ3 1288 aa15.71■□□□□ 0.11
ITSN1-229ENST00000487427 RASSF10A6NK89 507 aa15.7■□□□□ 0.1
ITSN1-229ENST00000487427 ZNF280AP59817 542 aaPredicted RBP15.7■□□□□ 0.1
ITSN1-229ENST00000487427 TAF7LQ5H9L4 462 aa15.7■□□□□ 0.1
ITSN1-229ENST00000487427 RBM26Q5T8P6 1007 aaKnown RBP15.7■□□□□ 0.1
ITSN1-229ENST00000487427 MIER1Q8N108 512 aa15.7■□□□□ 0.1
ITSN1-229ENST00000487427 KAZALD1Q96I82 304 aa15.7■□□□□ 0.1
ITSN1-229ENST00000487427 SUCLG2Q96I99 432 aa15.7■□□□□ 0.1
ITSN1-229ENST00000487427 GLIS2Q9BZE0 524 aaPredicted RBP15.7■□□□□ 0.1
ITSN1-229ENST00000487427 ABT1Q9ULW3 272 aaKnown RBP15.7■□□□□ 0.1
ITSN1-229ENST00000487427 EGFRP00533 1210 aa15.69■□□□□ 0.1
ITSN1-229ENST00000487427 USP17L8P0C7I0 530 aa15.69■□□□□ 0.1
ITSN1-229ENST00000487427 VEGFBP49765 207 aa15.69■□□□□ 0.1
ITSN1-229ENST00000487427 BRPF1P55201 1214 aaPredicted RBP15.69■□□□□ 0.1
ITSN1-229ENST00000487427 STRIP1Q5VSL9 837 aa15.69■□□□□ 0.1
ITSN1-229ENST00000487427 C15orf52Q6ZUT6 534 aaKnown RBP15.69■□□□□ 0.1
ITSN1-229ENST00000487427 HELBQ8NG08 1087 aaPredicted RBP15.69■□□□□ 0.1
ITSN1-229ENST00000487427 ZNF594Q96JF6 807 aaPredicted RBP15.69■□□□□ 0.1
ITSN1-229ENST00000487427 TAF5LO75529 589 aa15.68■□□□□ 0.1
ITSN1-229ENST00000487427 KIF4BQ2VIQ3 1234 aa15.68■□□□□ 0.1
ITSN1-229ENST00000487427 DACT2Q5SW24 774 aa15.68■□□□□ 0.1
ITSN1-229ENST00000487427 USP48Q86UV5 1035 aa15.68■□□□□ 0.1
ITSN1-229ENST00000487427 DCPSQ96C86 337 aaKnown RBP15.68■□□□□ 0.1
ITSN1-229ENST00000487427 USP44Q9H0E7 712 aa15.68■□□□□ 0.1
ITSN1-229ENST00000487427 CNNM1Q9NRU3 951 aa15.68■□□□□ 0.1
ITSN1-229ENST00000487427 MYH3P11055 1940 aa15.68■□□□□ 0.1
ITSN1-229ENST00000487427 ZNF609O15014 1411 aa15.68■□□□□ 0.1
ITSN1-229ENST00000487427 SNAP23O00161 211 aa15.67■□□□□ 0.1
ITSN1-229ENST00000487427 CELF2O95319 508 aaKnown RBP15.67■□□□□ 0.1
ITSN1-229ENST00000487427 KLRK1P26718 216 aa15.67■□□□□ 0.1
ITSN1-229ENST00000487427 RABL6Q3YEC7 729 aaPredicted RBP15.67■□□□□ 0.1
ITSN1-229ENST00000487427 TTLL5Q6EMB2 1281 aa15.67■□□□□ 0.1
ITSN1-229ENST00000487427 KRT26Q7Z3Y9 468 aa15.67■□□□□ 0.1
ITSN1-229ENST00000487427 BICC1Q9H694 974 aaKnown RBP15.67■□□□□ 0.1
ITSN1-229ENST00000487427 PLIN1O60240 522 aa15.66■□□□□ 0.1
ITSN1-229ENST00000487427 HSPA1AP0DMV8 641 aaKnown RBP15.66■□□□□ 0.1
ITSN1-229ENST00000487427 HSPA1BP0DMV9 641 aaKnown RBP15.66■□□□□ 0.1
ITSN1-229ENST00000487427 MMP14P50281 582 aa15.66■□□□□ 0.1
ITSN1-229ENST00000487427 OGFOD1Q8N543 542 aa15.66■□□□□ 0.1
ITSN1-229ENST00000487427 CD209Q9NNX6 404 aa15.66■□□□□ 0.1
ITSN1-229ENST00000487427 NOB1Q9ULX3 412 aaKnown RBP15.66■□□□□ 0.1
ITSN1-229ENST00000487427 TLL2Q9Y6L7 1015 aa15.66■□□□□ 0.1
ITSN1-229ENST00000487427 MYO3BQ8WXR4 1341 aa15.66■□□□□ 0.1
ITSN1-229ENST00000487427 RARSP54136 660 aaKnown RBP15.65■□□□□ 0.1
ITSN1-229ENST00000487427 SCARF1Q14162 830 aa15.65■□□□□ 0.1
ITSN1-229ENST00000487427 SAPCD2Q86UD0 394 aa15.65■□□□□ 0.1
ITSN1-229ENST00000487427 ANKRD44Q8N8A2 993 aa15.65■□□□□ 0.1
ITSN1-229ENST00000487427 FBXW7Q969H0 707 aa15.65■□□□□ 0.1
ITSN1-229ENST00000487427 API5Q9BZZ5 524 aaKnown RBP15.65■□□□□ 0.1
ITSN1-229ENST00000487427 MYOZ2Q9NPC6 264 aa15.65■□□□□ 0.1
ITSN1-229ENST00000487427 RIPOR2Q9Y4F9 1068 aa15.65■□□□□ 0.1
ITSN1-229ENST00000487427 WDR33Q9C0J8 1336 aaKnown RBP15.65■□□□□ 0.1
ITSN1-229ENST00000487427 IRS2Q9Y4H2 1338 aa15.65■□□□□ 0.1
ITSN1-229ENST00000487427 SCN9AQ15858 1988 aa15.64■□□□□ 0.09
ITSN1-229ENST00000487427 ABCB7O75027 752 aa15.64■□□□□ 0.09
ITSN1-229ENST00000487427 ECE1P42892 770 aa15.64■□□□□ 0.09
ITSN1-229ENST00000487427 GTF2IP78347 998 aa15.64■□□□□ 0.09
ITSN1-229ENST00000487427 CACNB1Q02641 598 aaPredicted RBP15.64■□□□□ 0.09
ITSN1-229ENST00000487427 UBE4AQ14139 1066 aa15.64■□□□□ 0.09
ITSN1-229ENST00000487427 ZNF804AQ7Z570 1209 aa15.64■□□□□ 0.09
ITSN1-229ENST00000487427 SULF1Q8IWU6 871 aa15.64■□□□□ 0.09
ITSN1-229ENST00000487427 HHIPL1Q96JK4 782 aa15.64■□□□□ 0.09
ITSN1-229ENST00000487427 MXD3Q9BW11 206 aa15.64■□□□□ 0.09
ITSN1-229ENST00000487427 PUS3Q9BZE2 481 aaKnown RBP15.64■□□□□ 0.09
ITSN1-229ENST00000487427 ZNF408Q9H9D4 720 aa15.64■□□□□ 0.09
ITSN1-229ENST00000487427 IL1R1P14778 569 aa15.63■□□□□ 0.09
ITSN1-229ENST00000487427 ARHGAP45Q92619 1136 aa15.63■□□□□ 0.09
ITSN1-229ENST00000487427 CAPNS2Q96L46 248 aa15.63■□□□□ 0.09
ITSN1-229ENST00000487427 GGA3Q9NZ52 723 aa15.63■□□□□ 0.09
ITSN1-229ENST00000487427 MROH5Q6ZUA9 1318 aa15.63■□□□□ 0.09
ITSN1-229ENST00000487427 DSG3P32926 999 aa15.62■□□□□ 0.09
ITSN1-229ENST00000487427 ANGEL2Q5VTE6 544 aaKnown RBP15.62■□□□□ 0.09
ITSN1-229ENST00000487427 DLK2Q6UY11 383 aa15.62■□□□□ 0.09
ITSN1-229ENST00000487427 PAXIP1Q6ZW49 1069 aaPredicted RBP15.62■□□□□ 0.09
ITSN1-229ENST00000487427 HDAC5Q9UQL6 1122 aa15.62■□□□□ 0.09
ITSN1-229ENST00000487427 ASTN2O75129 1339 aaPredicted RBP15.62■□□□□ 0.09
ITSN1-229ENST00000487427 ADM5C9JUS6 153 aa15.61■□□□□ 0.09
ITSN1-229ENST00000487427 MAP2K1Q02750 393 aaPredicted RBP15.61■□□□□ 0.09
ITSN1-229ENST00000487427 CYP4F22Q6NT55 531 aa15.61■□□□□ 0.09
ITSN1-229ENST00000487427 WBP1LQ9NX94 342 aa15.61■□□□□ 0.09
ITSN1-229ENST00000487427 HDAC9Q9UKV0 1011 aa15.61■□□□□ 0.09
ITSN1-229ENST00000487427 PITPNM2Q9BZ72 1349 aa15.61■□□□□ 0.09
ITSN1-229ENST00000487427 IPO8O15397 1037 aaKnown RBP15.6■□□□□ 0.09
ITSN1-229ENST00000487427 SASH1O94885 1247 aa15.6■□□□□ 0.09
ITSN1-229ENST00000487427 UBTFL1P0CB47 393 aaPredicted RBP15.6■□□□□ 0.09
ITSN1-229ENST00000487427 FKBP1AP62942 108 aaKnown RBP15.6■□□□□ 0.09
ITSN1-229ENST00000487427 HNRNPUQ00839 825 aaKnown RBP eCLIP15.6■□□□□ 0.09
ITSN1-229ENST00000487427 MKRN4PQ13434 485 aaPredicted RBP15.6■□□□□ 0.09
ITSN1-229ENST00000487427 NBPF9Q3BBW0 867 aa15.6■□□□□ 0.09
ITSN1-229ENST00000487427 LRRC24Q50LG9 513 aa15.6■□□□□ 0.09
ITSN1-229ENST00000487427 COL13A1Q5TAT6 717 aaPredicted RBP15.6■□□□□ 0.09
ITSN1-229ENST00000487427 IFFO2Q5TF58 517 aa15.6■□□□□ 0.09
ITSN1-229ENST00000487427 KIAA0825Q8IV33 1275 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms