RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 CENPFP49454 3210 aa19.91■□□□□ 0.78
MCF2L-228ENST00000487354 RBBP6Q7Z6E9 1792 aaKnown RBP19.9■□□□□ 0.78
MCF2L-228ENST00000487354 WNT10BO00744 389 aa19.9■□□□□ 0.78
MCF2L-228ENST00000487354 NOM1Q5C9Z4 860 aaKnown RBP19.9■□□□□ 0.78
MCF2L-228ENST00000487354 R3HDMLQ9H3Y0 253 aa19.9■□□□□ 0.78
MCF2L-228ENST00000487354 BRCA2P51587 3418 aa19.9■□□□□ 0.78
MCF2L-228ENST00000487354 IGKV5-2P06315 115 aa19.89■□□□□ 0.77
MCF2L-228ENST00000487354 CTSWP56202 376 aa19.89■□□□□ 0.77
MCF2L-228ENST00000487354 PKN2Q16513 984 aaKnown RBP19.89■□□□□ 0.77
MCF2L-228ENST00000487354 TXNRD3Q86VQ6 643 aa19.89■□□□□ 0.77
MCF2L-228ENST00000487354 C8orf58Q8NAV2 365 aa19.89■□□□□ 0.77
MCF2L-228ENST00000487354 MINPP1Q9UNW1 487 aa19.89■□□□□ 0.77
MCF2L-228ENST00000487354 SSC5DA1L4H1 1573 aa19.88■□□□□ 0.77
MCF2L-228ENST00000487354 GPR25O00155 361 aa19.88■□□□□ 0.77
MCF2L-228ENST00000487354 ELL2O00472 640 aaPredicted RBP19.88■□□□□ 0.77
MCF2L-228ENST00000487354 HSP90B1P14625 803 aaKnown RBP19.88■□□□□ 0.77
MCF2L-228ENST00000487354 TTLL11Q8NHH1 800 aa19.88■□□□□ 0.77
MCF2L-228ENST00000487354 CFHR5Q9BXR6 569 aa19.88■□□□□ 0.77
MCF2L-228ENST00000487354 GREM2Q9H772 168 aa19.88■□□□□ 0.77
MCF2L-228ENST00000487354 IFT57Q9NWB7 429 aa19.88■□□□□ 0.77
MCF2L-228ENST00000487354 SASH1O94885 1247 aa19.87■□□□□ 0.77
MCF2L-228ENST00000487354 KLRK1P26718 216 aa19.87■□□□□ 0.77
MCF2L-228ENST00000487354 MKRN3Q13064 507 aaKnown RBP19.87■□□□□ 0.77
MCF2L-228ENST00000487354 ZBED3Q96IU2 234 aaPredicted RBP19.87■□□□□ 0.77
MCF2L-228ENST00000487354 BSDC1Q9NW68 430 aaPredicted RBP19.87■□□□□ 0.77
MCF2L-228ENST00000487354 OTOFQ9HC10 1997 aa19.86■□□□□ 0.77
MCF2L-228ENST00000487354 PTPN12Q05209 780 aaKnown RBP19.86■□□□□ 0.77
MCF2L-228ENST00000487354 WDR43Q15061 677 aaKnown RBP eCLIP19.86■□□□□ 0.77
MCF2L-228ENST00000487354 HDAC9Q9UKV0 1011 aa19.86■□□□□ 0.77
MCF2L-228ENST00000487354 CCT4P50991 539 aaKnown RBP19.85■□□□□ 0.77
MCF2L-228ENST00000487354 STRIP1Q5VSL9 837 aa19.85■□□□□ 0.77
MCF2L-228ENST00000487354 FBXO46Q6PJ61 603 aaPredicted RBP19.85■□□□□ 0.77
MCF2L-228ENST00000487354 CDC5LQ99459 802 aaKnown RBP19.85■□□□□ 0.77
MCF2L-228ENST00000487354 MAP3K2Q9Y2U5 619 aa19.85■□□□□ 0.77
MCF2L-228ENST00000487354 MYO3BQ8WXR4 1341 aa19.84■□□□□ 0.77
MCF2L-228ENST00000487354 LDLRAD1Q5T700 205 aa19.84■□□□□ 0.77
MCF2L-228ENST00000487354 TSPYL6Q8N831 410 aa19.84■□□□□ 0.77
MCF2L-228ENST00000487354 FZD1Q9UP38 647 aa19.84■□□□□ 0.77
MCF2L-228ENST00000487354 GNAI1P63096 354 aa19.83■□□□□ 0.77
MCF2L-228ENST00000487354 TTLL12Q14166 644 aaPredicted RBP19.83■□□□□ 0.77
MCF2L-228ENST00000487354 COA1Q9GZY4 146 aa19.83■□□□□ 0.77
MCF2L-228ENST00000487354 COL1A1P02452 1464 aaPredicted RBP19.83■□□□□ 0.76
MCF2L-228ENST00000487354 IRS2Q9Y4H2 1338 aa19.82■□□□□ 0.76
MCF2L-228ENST00000487354 APAF1O14727 1248 aa19.82■□□□□ 0.76
MCF2L-228ENST00000487354 CWF19L2Q2TBE0 894 aaKnown RBP19.82■□□□□ 0.76
MCF2L-228ENST00000487354 SPRYD7Q5W111 196 aa19.82■□□□□ 0.76
MCF2L-228ENST00000487354 PI4KAP2A4QPH2 592 aa19.81■□□□□ 0.76
MCF2L-228ENST00000487354 SREBF2Q12772 1141 aa19.81■□□□□ 0.76
MCF2L-228ENST00000487354 KSR2Q6VAB6 950 aa19.81■□□□□ 0.76
MCF2L-228ENST00000487354 PI4KAP1Q8N8J0 262 aa19.81■□□□□ 0.76
MCF2L-228ENST00000487354 NEURL1BA8MQ27 555 aa19.8■□□□□ 0.76
MCF2L-228ENST00000487354 FKTNO75072 461 aa19.8■□□□□ 0.76
MCF2L-228ENST00000487354 DDX58O95786 925 aaKnown RBP19.8■□□□□ 0.76
MCF2L-228ENST00000487354 DDX10Q13206 875 aaKnown RBP19.8■□□□□ 0.76
MCF2L-228ENST00000487354 PRKG1Q13976 671 aa19.8■□□□□ 0.76
MCF2L-228ENST00000487354 KIAA0825Q8IV33 1275 aa19.8■□□□□ 0.76
MCF2L-228ENST00000487354 OGFOD1Q8N543 542 aa19.8■□□□□ 0.76
MCF2L-228ENST00000487354 FBXW7Q969H0 707 aa19.8■□□□□ 0.76
MCF2L-228ENST00000487354 H7C1W4 665 aa19.79■□□□□ 0.76
MCF2L-228ENST00000487354 NF2P35240 595 aa19.79■□□□□ 0.76
MCF2L-228ENST00000487354 CASP7P55210 303 aa19.79■□□□□ 0.76
MCF2L-228ENST00000487354 CCDC30Q5VVM6 783 aa19.79■□□□□ 0.76
MCF2L-228ENST00000487354 APOBEC3FQ8IUX4 373 aaKnown RBP19.79■□□□□ 0.76
MCF2L-228ENST00000487354 CERS5Q8N5B7 392 aa19.79■□□□□ 0.76
MCF2L-228ENST00000487354 LEMD3Q9Y2U8 911 aa19.79■□□□□ 0.76
MCF2L-228ENST00000487354 PCDHAC2Q9Y5I4 1007 aa19.79■□□□□ 0.76
MCF2L-228ENST00000487354 ZNF804BA4D1E1 1349 aa19.78■□□□□ 0.76
MCF2L-228ENST00000487354 AOX1Q06278 1338 aa19.78■□□□□ 0.76
MCF2L-228ENST00000487354 KIAA0100Q14667 2235 aaKnown RBP19.78■□□□□ 0.76
MCF2L-228ENST00000487354 CACNA1FO60840 1977 aa19.78■□□□□ 0.76
MCF2L-228ENST00000487354 MAP3K11Q16584 847 aa19.78■□□□□ 0.76
MCF2L-228ENST00000487354 TTLL5Q6EMB2 1281 aa19.78■□□□□ 0.76
MCF2L-228ENST00000487354 G2E3Q7L622 706 aa19.78■□□□□ 0.76
MCF2L-228ENST00000487354 ARMC9Q7Z3E5 817 aa19.78■□□□□ 0.76
MCF2L-228ENST00000487354 ANGEL1Q9UNK9 670 aaKnown RBP19.78■□□□□ 0.76
MCF2L-228ENST00000487354 ARAP2Q8WZ64 1704 aa19.78■□□□□ 0.76
MCF2L-228ENST00000487354 IGF2BP3O00425 579 aaKnown RBP eCLIP19.77■□□□□ 0.76
MCF2L-228ENST00000487354 MMP14P50281 582 aa19.77■□□□□ 0.76
MCF2L-228ENST00000487354 CAP1Q01518 475 aa19.77■□□□□ 0.76
MCF2L-228ENST00000487354 UBE3BQ7Z3V4 1068 aa19.77■□□□□ 0.76
MCF2L-228ENST00000487354 CLMNQ96JQ2 1002 aa19.77■□□□□ 0.76
MCF2L-228ENST00000487354 PLA2G12BQ9BX93 195 aa19.77■□□□□ 0.76
MCF2L-228ENST00000487354 GTF2IP78347 998 aa19.76■□□□□ 0.75
MCF2L-228ENST00000487354 IFNL1Q8IU54 200 aa19.76■□□□□ 0.75
MCF2L-228ENST00000487354 POTEFA5A3E0 1075 aa19.75■□□□□ 0.75
MCF2L-228ENST00000487354 SNAP23O00161 211 aa19.75■□□□□ 0.75
MCF2L-228ENST00000487354 ITGA6P23229 1130 aa19.75■□□□□ 0.75
MCF2L-228ENST00000487354 CALD1Q05682 793 aaKnown RBP19.75■□□□□ 0.75
MCF2L-228ENST00000487354 OTOP1Q7RTM1 612 aa19.75■□□□□ 0.75
MCF2L-228ENST00000487354 WNK4Q96J92 1243 aa19.75■□□□□ 0.75
MCF2L-228ENST00000487354 DEFB129Q9H1M3 183 aa19.75■□□□□ 0.75
MCF2L-228ENST00000487354 CSF1RP07333 972 aa19.74■□□□□ 0.75
MCF2L-228ENST00000487354 GJA5P36382 358 aa19.74■□□□□ 0.75
MCF2L-228ENST00000487354 IGHMBP2P38935 993 aaKnown RBP19.74■□□□□ 0.75
MCF2L-228ENST00000487354 MTMR14Q8NCE2 650 aa19.74■□□□□ 0.75
MCF2L-228ENST00000487354 TSR2Q969E8 191 aaKnown RBP19.74■□□□□ 0.75
MCF2L-228ENST00000487354 PRKRIP1Q9H875 184 aaPredicted RBP19.74■□□□□ 0.75
MCF2L-228ENST00000487354 CD209Q9NNX6 404 aa19.74■□□□□ 0.75
MCF2L-228ENST00000487354 MANSC4A6NHS7 340 aaPredicted RBP19.73■□□□□ 0.75
MCF2L-228ENST00000487354 ALDH1A1P00352 501 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms