RNA–Protein interactions for RNA: ENST00000487300.1

SRM-205, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-205ENST00000487300 COA1Q9GZY4 146 aa28.39■■■□□ 2.14
SRM-205ENST00000487300 COL13A1Q5TAT6 717 aaPredicted RBP28.38■■■□□ 2.13
SRM-205ENST00000487300 SLC4A10Q6U841 1118 aa28.38■■■□□ 2.13
SRM-205ENST00000487300 CDCA7LQ96GN5 454 aa28.38■■■□□ 2.13
SRM-205ENST00000487300 KAZALD1Q96I82 304 aa28.38■■■□□ 2.13
SRM-205ENST00000487300 WDR33Q9C0J8 1336 aaKnown RBP28.38■■■□□ 2.13
SRM-205ENST00000487300 ARAP2Q8WZ64 1704 aa28.38■■■□□ 2.13
SRM-205ENST00000487300 CELF2O95319 508 aaKnown RBP28.37■■■□□ 2.13
SRM-205ENST00000487300 KLRK1P26718 216 aa28.37■■■□□ 2.13
SRM-205ENST00000487300 DACT2Q5SW24 774 aa28.37■■■□□ 2.13
SRM-205ENST00000487300 SAPCD2Q86UD0 394 aa28.37■■■□□ 2.13
SRM-205ENST00000487300 C9orf78Q9NZ63 289 aaPredicted RBP28.37■■■□□ 2.13
SRM-205ENST00000487300 ALDH1L2Q3SY69 923 aa28.36■■■□□ 2.13
SRM-205ENST00000487300 C15orf52Q6ZUT6 534 aaKnown RBP28.36■■■□□ 2.13
SRM-205ENST00000487300 HHIPL1Q96JK4 782 aa28.36■■■□□ 2.13
SRM-205ENST00000487300 NBPF7P0C2Y1 421 aaPredicted RBP28.35■■■□□ 2.13
SRM-205ENST00000487300 STRIP1Q5VSL9 837 aa28.35■■■□□ 2.13
SRM-205ENST00000487300 CAPNS2Q96L46 248 aa28.34■■■□□ 2.13
SRM-205ENST00000487300 WBP1LQ9NX94 342 aa28.34■■■□□ 2.13
SRM-205ENST00000487300 MYO3BQ8WXR4 1341 aa28.34■■■□□ 2.13
SRM-205ENST00000487300 USP17L8P0C7I0 530 aa28.33■■■□□ 2.13
SRM-205ENST00000487300 KRT26Q7Z3Y9 468 aa28.33■■■□□ 2.13
SRM-205ENST00000487300 USP48Q86UV5 1035 aa28.33■■■□□ 2.13
SRM-205ENST00000487300 SUCLG2Q96I99 432 aa28.33■■■□□ 2.13
SRM-205ENST00000487300 ASTN2O75129 1339 aaPredicted RBP28.33■■■□□ 2.13
SRM-205ENST00000487300 FOXN1O15353 648 aa28.32■■■□□ 2.12
SRM-205ENST00000487300 ECE1P42892 770 aa28.32■■■□□ 2.12
SRM-205ENST00000487300 CCDC57Q2TAC2 916 aa28.32■■■□□ 2.12
SRM-205ENST00000487300 RABL6Q3YEC7 729 aaPredicted RBP28.32■■■□□ 2.12
SRM-205ENST00000487300 RBM26Q5T8P6 1007 aaKnown RBP28.32■■■□□ 2.12
SRM-205ENST00000487300 MYOZ2Q9NPC6 264 aa28.32■■■□□ 2.12
SRM-205ENST00000487300 GGA3Q9NZ52 723 aa28.32■■■□□ 2.12
SRM-205ENST00000487300 CHMP3Q9Y3E7 222 aa28.32■■■□□ 2.12
SRM-205ENST00000487300 CT47B1P0C2W7 299 aaPredicted RBP28.31■■■□□ 2.12
SRM-205ENST00000487300 DLK2Q6UY11 383 aa28.31■■■□□ 2.12
SRM-205ENST00000487300 DCPSQ96C86 337 aaKnown RBP28.31■■■□□ 2.12
SRM-205ENST00000487300 ZNF594Q96JF6 807 aaPredicted RBP28.31■■■□□ 2.12
SRM-205ENST00000487300 PITPNM2Q9BZ72 1349 aa28.3■■■□□ 2.12
SRM-205ENST00000487300 ADM5C9JUS6 153 aa28.3■■■□□ 2.12
SRM-205ENST00000487300 SNAP23O00161 211 aa28.3■■■□□ 2.12
SRM-205ENST00000487300 CYP4F22Q6NT55 531 aa28.3■■■□□ 2.12
SRM-205ENST00000487300 TAF5LO75529 589 aa28.29■■■□□ 2.12
SRM-205ENST00000487300 MXD3Q9BW11 206 aa28.29■■■□□ 2.12
SRM-205ENST00000487300 PAPPA2Q9BXP8 1791 aa28.29■■■□□ 2.12
SRM-205ENST00000487300 KCNJ4P48050 445 aa28.28■■■□□ 2.12
SRM-205ENST00000487300 MMP14P50281 582 aa28.28■■■□□ 2.12
SRM-205ENST00000487300 LDHAL6AQ6ZMR3 332 aa28.28■■■□□ 2.12
SRM-205ENST00000487300 HELBQ8NG08 1087 aaPredicted RBP28.28■■■□□ 2.12
SRM-205ENST00000487300 CD209Q9NNX6 404 aa28.28■■■□□ 2.12
SRM-205ENST00000487300 MAP2K1Q02750 393 aaPredicted RBP28.27■■■□□ 2.12
SRM-205ENST00000487300 SCARF1Q14162 830 aa28.27■■■□□ 2.12
SRM-205ENST00000487300 ANKRD44Q8N8A2 993 aa28.27■■■□□ 2.12
SRM-205ENST00000487300 BICC1Q9H694 974 aaKnown RBP28.27■■■□□ 2.12
SRM-205ENST00000487300 ZNF408Q9H9D4 720 aa28.27■■■□□ 2.12
SRM-205ENST00000487300 BRPF1P55201 1214 aaPredicted RBP28.26■■■□□ 2.11
SRM-205ENST00000487300 ANGEL2Q5VTE6 544 aaKnown RBP28.26■■■□□ 2.11
SRM-205ENST00000487300 USP44Q9H0E7 712 aa28.26■■■□□ 2.11
SRM-205ENST00000487300 IL1R1P14778 569 aa28.25■■■□□ 2.11
SRM-205ENST00000487300 TTLL5Q6EMB2 1281 aa28.25■■■□□ 2.11
SRM-205ENST00000487300 SULF1Q8IWU6 871 aa28.25■■■□□ 2.11
SRM-205ENST00000487300 SMC4Q9NTJ3 1288 aa28.25■■■□□ 2.11
SRM-205ENST00000487300 MAP2K2P36507 400 aa28.24■■■□□ 2.11
SRM-205ENST00000487300 TAF7LQ5H9L4 462 aa28.24■■■□□ 2.11
SRM-205ENST00000487300 PRDM10Q9NQV6 1147 aa28.24■■■□□ 2.11
SRM-205ENST00000487300 CNNM1Q9NRU3 951 aa28.24■■■□□ 2.11
SRM-205ENST00000487300 CTCFP49711 727 aaPredicted RBP28.23■■■□□ 2.11
SRM-205ENST00000487300 GTF2IP78347 998 aa28.23■■■□□ 2.11
SRM-205ENST00000487300 AIDAQ96BJ3 306 aa28.23■■■□□ 2.11
SRM-205ENST00000487300 MYH13Q9UKX3 1938 aa28.23■■■□□ 2.11
SRM-205ENST00000487300 NBPF9Q3BBW0 867 aa28.22■■■□□ 2.11
SRM-205ENST00000487300 PAXIP1Q6ZW49 1069 aaPredicted RBP28.22■■■□□ 2.11
SRM-205ENST00000487300 OGFOD1Q8N543 542 aa28.22■■■□□ 2.11
SRM-205ENST00000487300 CDCA5Q96FF9 252 aa28.22■■■□□ 2.11
SRM-205ENST00000487300 ZBED3Q96IU2 234 aaPredicted RBP28.22■■■□□ 2.11
SRM-205ENST00000487300 GBA2Q9HCG7 927 aaPredicted RBP28.22■■■□□ 2.11
SRM-205ENST00000487300 RIPOR2Q9Y4F9 1068 aa28.22■■■□□ 2.11
SRM-205ENST00000487300 WNT10BO00744 389 aa28.21■■■□□ 2.11
SRM-205ENST00000487300 HUNKP57058 714 aa28.21■■■□□ 2.11
SRM-205ENST00000487300 ZNF804AQ7Z570 1209 aa28.21■■■□□ 2.11
SRM-205ENST00000487300 CERS5Q8N5B7 392 aa28.21■■■□□ 2.11
SRM-205ENST00000487300 FBXW7Q969H0 707 aa28.21■■■□□ 2.11
SRM-205ENST00000487300 PUS3Q9BZE2 481 aaKnown RBP28.21■■■□□ 2.11
SRM-205ENST00000487300 AOC2O75106 756 aa28.2■■■□□ 2.1
SRM-205ENST00000487300 UBE4AQ14139 1066 aa28.2■■■□□ 2.1
SRM-205ENST00000487300 MROH5Q6ZUA9 1318 aa28.19■■■□□ 2.1
SRM-205ENST00000487300 HSPA8P11142 646 aaKnown RBP28.19■■■□□ 2.1
SRM-205ENST00000487300 FKBP1AP62942 108 aaKnown RBP28.19■■■□□ 2.1
SRM-205ENST00000487300 TNS4Q8IZW8 715 aa28.19■■■□□ 2.1
SRM-205ENST00000487300 GRM1Q13255 1194 aa28.18■■■□□ 2.1
SRM-205ENST00000487300 KIAA0825Q8IV33 1275 aa28.18■■■□□ 2.1
SRM-205ENST00000487300 VGLL2Q8N8G2 317 aa28.18■■■□□ 2.1
SRM-205ENST00000487300 C2orf69Q8N8R5 385 aa28.18■■■□□ 2.1
SRM-205ENST00000487300 LAMB1P07942 1786 aa28.18■■■□□ 2.1
SRM-205ENST00000487300 FAM155AB1AL88 458 aaPredicted RBP28.17■■■□□ 2.1
SRM-205ENST00000487300 AKAP11Q9UKA4 1901 aa28.17■■■□□ 2.1
SRM-205ENST00000487300 FAM205AQ6ZU69 1335 aa28.17■■■□□ 2.1
SRM-205ENST00000487300 COL1A1P02452 1464 aaPredicted RBP28.16■■■□□ 2.1
SRM-205ENST00000487300 PLIN1O60240 522 aa28.16■■■□□ 2.1
SRM-205ENST00000487300 RARSP54136 660 aaKnown RBP28.16■■■□□ 2.1
SRM-205ENST00000487300 SASH1O94885 1247 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms