RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 CYP7A1P22680 504 aa16.77■□□□□ 0.28
EPHB4-206ENST00000487222 CEP112Q8N8E3 955 aa16.77■□□□□ 0.28
EPHB4-206ENST00000487222 TRIM75PA6NK02 468 aa16.77■□□□□ 0.28
EPHB4-206ENST00000487222 HSP90AA4PQ58FG1 418 aa16.77■□□□□ 0.28
EPHB4-206ENST00000487222 SPAG5Q96R06 1193 aa16.77■□□□□ 0.28
EPHB4-206ENST00000487222 ZFYVE9O95405 1425 aa16.77■□□□□ 0.27
EPHB4-206ENST00000487222 SPECC1LQ69YQ0 1117 aa16.77■□□□□ 0.27
EPHB4-206ENST00000487222 RUFY3Q7L099 469 aa16.76■□□□□ 0.27
EPHB4-206ENST00000487222 TIGD1Q96MW7 591 aa16.76■□□□□ 0.27
EPHB4-206ENST00000487222 DHX32Q7L7V1 743 aaKnown RBP16.76■□□□□ 0.27
EPHB4-206ENST00000487222 CTNNA2P26232 953 aa16.76■□□□□ 0.27
EPHB4-206ENST00000487222 GSTO1P78417 241 aa16.76■□□□□ 0.27
EPHB4-206ENST00000487222 HLA-DOAP06340 250 aa16.76■□□□□ 0.27
EPHB4-206ENST00000487222 TUBB4BP68371 445 aa16.76■□□□□ 0.27
EPHB4-206ENST00000487222 GIGYF2Q6Y7W6 1299 aaKnown RBP16.76■□□□□ 0.27
EPHB4-206ENST00000487222 BRAPQ7Z569 592 aa16.76■□□□□ 0.27
EPHB4-206ENST00000487222 ZBTB7BO15156 539 aaPredicted RBP16.75■□□□□ 0.27
EPHB4-206ENST00000487222 TBCAO75347 108 aaKnown RBP16.75■□□□□ 0.27
EPHB4-206ENST00000487222 A0A1W2PP64 1363 aa16.75■□□□□ 0.27
EPHB4-206ENST00000487222 ERMNQ8TAM6 284 aa16.75■□□□□ 0.27
EPHB4-206ENST00000487222 RNF113AO15541 343 aaKnown RBP16.75■□□□□ 0.27
EPHB4-206ENST00000487222 ATL3Q6DD88 541 aa16.75■□□□□ 0.27
EPHB4-206ENST00000487222 SYCP3Q8IZU3 236 aa16.75■□□□□ 0.27
EPHB4-206ENST00000487222 RNF216Q9NWF9 866 aaPredicted RBP16.75■□□□□ 0.27
EPHB4-206ENST00000487222 PTPDC1A2A3K4 754 aa16.75■□□□□ 0.27
EPHB4-206ENST00000487222 PTGS1P23219 599 aa16.75■□□□□ 0.27
EPHB4-206ENST00000487222 MCM6Q14566 821 aa16.75■□□□□ 0.27
EPHB4-206ENST00000487222 PHACTR3Q96KR7 559 aa16.75■□□□□ 0.27
EPHB4-206ENST00000487222 CFAP43Q8NDM7 1665 aa16.74■□□□□ 0.27
EPHB4-206ENST00000487222 KIAA0753Q2KHM9 967 aa16.74■□□□□ 0.27
EPHB4-206ENST00000487222 BBXQ8WY36 941 aaPredicted RBP16.74■□□□□ 0.27
EPHB4-206ENST00000487222 ABCC1P33527 1531 aa16.74■□□□□ 0.27
EPHB4-206ENST00000487222 CTAGE9A4FU28 777 aa16.74■□□□□ 0.27
EPHB4-206ENST00000487222 TACC1O75410 805 aa16.74■□□□□ 0.27
EPHB4-206ENST00000487222 KRT83P78385 493 aa16.74■□□□□ 0.27
EPHB4-206ENST00000487222 GOLGA1Q92805 767 aa16.74■□□□□ 0.27
EPHB4-206ENST00000487222 FSD2A1L4K1 749 aa16.74■□□□□ 0.27
EPHB4-206ENST00000487222 IVLP07476 585 aa16.74■□□□□ 0.27
EPHB4-206ENST00000487222 CABP5Q9NP86 173 aa16.74■□□□□ 0.27
EPHB4-206ENST00000487222 DHX58Q96C10 678 aa16.73■□□□□ 0.27
EPHB4-206ENST00000487222 SCLT1Q96NL6 688 aa16.73■□□□□ 0.27
EPHB4-206ENST00000487222 PLVAPQ9BX97 442 aa16.73■□□□□ 0.27
EPHB4-206ENST00000487222 TSPY3P0CV98 308 aa16.73■□□□□ 0.27
EPHB4-206ENST00000487222 TSPY8P0CW00 308 aa16.73■□□□□ 0.27
EPHB4-206ENST00000487222 UBE4AQ14139 1066 aa16.73■□□□□ 0.27
EPHB4-206ENST00000487222 KRT24Q2M2I5 525 aa16.73■□□□□ 0.27
EPHB4-206ENST00000487222 CALM1P0DP23 149 aa16.73■□□□□ 0.27
EPHB4-206ENST00000487222 CALM2P0DP24 149 aa16.73■□□□□ 0.27
EPHB4-206ENST00000487222 CALM3P0DP25 149 aa16.73■□□□□ 0.27
EPHB4-206ENST00000487222 APOBRQ0VD83 1088 aa16.73■□□□□ 0.27
EPHB4-206ENST00000487222 EYA1Q99502 592 aa16.73■□□□□ 0.27
EPHB4-206ENST00000487222 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.73■□□□□ 0.27
EPHB4-206ENST00000487222 IBSPP21815 317 aaPredicted RBP16.73■□□□□ 0.27
EPHB4-206ENST00000487222 KRT86O43790 486 aa16.72■□□□□ 0.27
EPHB4-206ENST00000487222 LRRC59Q96AG4 307 aaKnown RBP16.72■□□□□ 0.27
EPHB4-206ENST00000487222 GNAT2P19087 354 aa16.72■□□□□ 0.27
EPHB4-206ENST00000487222 CALML3P27482 149 aa16.72■□□□□ 0.27
EPHB4-206ENST00000487222 C19orf44Q9H6X5 657 aa16.72■□□□□ 0.27
EPHB4-206ENST00000487222 ASIC1P78348 528 aa16.72■□□□□ 0.27
EPHB4-206ENST00000487222 MAP3K5Q99683 1374 aa16.72■□□□□ 0.27
EPHB4-206ENST00000487222 KIF5AQ12840 1032 aa16.72■□□□□ 0.27
EPHB4-206ENST00000487222 NAA16Q6N069 864 aaPredicted RBP16.72■□□□□ 0.27
EPHB4-206ENST00000487222 GTPBP4Q9BZE4 634 aaKnown RBP16.72■□□□□ 0.27
EPHB4-206ENST00000487222 IFNKQ9P0W0 207 aa16.72■□□□□ 0.27
EPHB4-206ENST00000487222 NBPF6Q5VWK0 638 aa16.71■□□□□ 0.27
EPHB4-206ENST00000487222 NBPF5PQ86XG9 351 aaPredicted RBP16.71■□□□□ 0.27
EPHB4-206ENST00000487222 NBPF4Q96M43 638 aa16.71■□□□□ 0.27
EPHB4-206ENST00000487222 SELENOOQ9BVL4 669 aa16.71■□□□□ 0.27
EPHB4-206ENST00000487222 YTHDC2Q9H6S0 1430 aaKnown RBP16.71■□□□□ 0.27
EPHB4-206ENST00000487222 RFC4P35249 363 aa16.71■□□□□ 0.27
EPHB4-206ENST00000487222 CWF19L2Q2TBE0 894 aaKnown RBP16.71■□□□□ 0.27
EPHB4-206ENST00000487222 CCDC155Q8N6L0 562 aa16.71■□□□□ 0.27
EPHB4-206ENST00000487222 TBC1D5Q92609 795 aa16.71■□□□□ 0.27
EPHB4-206ENST00000487222 OPA1O60313 960 aa16.71■□□□□ 0.27
EPHB4-206ENST00000487222 TRAF1Q13077 416 aa16.71■□□□□ 0.27
EPHB4-206ENST00000487222 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.71■□□□□ 0.27
EPHB4-206ENST00000487222 V9GYY5 206 aaPredicted RBP16.71■□□□□ 0.27
EPHB4-206ENST00000487222 NPC1L1Q9UHC9 1359 aa16.71■□□□□ 0.27
EPHB4-206ENST00000487222 GCP02774 474 aa16.71■□□□□ 0.27
EPHB4-206ENST00000487222 PZPP20742 1482 aa16.71■□□□□ 0.27
EPHB4-206ENST00000487222 RTL9Q8NET4 1388 aa16.71■□□□□ 0.26
EPHB4-206ENST00000487222 TUBBP07437 444 aa16.7■□□□□ 0.26
EPHB4-206ENST00000487222 HEATR3Q7Z4Q2 680 aa16.7■□□□□ 0.26
EPHB4-206ENST00000487222 FEZ1Q99689 392 aa16.7■□□□□ 0.26
EPHB4-206ENST00000487222 TRPM2O94759 1503 aa16.7■□□□□ 0.26
EPHB4-206ENST00000487222 CCDC174Q6PII3 467 aa16.7■□□□□ 0.26
EPHB4-206ENST00000487222 DDX12PQ92771 950 aa16.7■□□□□ 0.26
EPHB4-206ENST00000487222 CCDC94Q9BW85 323 aaPredicted RBP16.7■□□□□ 0.26
EPHB4-206ENST00000487222 TBX22Q9Y458 520 aa16.7■□□□□ 0.26
EPHB4-206ENST00000487222 KDM2BQ8NHM5 1336 aa16.7■□□□□ 0.26
EPHB4-206ENST00000487222 COL17A1Q9UMD9 1497 aaPredicted RBP16.7■□□□□ 0.26
EPHB4-206ENST00000487222 SLC4A8Q2Y0W8 1093 aa16.7■□□□□ 0.26
EPHB4-206ENST00000487222 MAP3K19Q56UN5 1328 aa16.7■□□□□ 0.26
EPHB4-206ENST00000487222 NFATC2IPQ8NCF5 419 aa16.7■□□□□ 0.26
EPHB4-206ENST00000487222 DRC1Q96MC2 740 aa16.7■□□□□ 0.26
EPHB4-206ENST00000487222 CCDC42Q96M95 316 aa16.69■□□□□ 0.26
EPHB4-206ENST00000487222 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.69■□□□□ 0.26
EPHB4-206ENST00000487222 CHST3Q7LGC8 479 aa16.69■□□□□ 0.26
EPHB4-206ENST00000487222 SAMM50Q9Y512 469 aa16.69■□□□□ 0.26
EPHB4-206ENST00000487222 IL2RBP14784 551 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms