RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 USP17L3A6NCW0 530 aa28.06■■■□□ 2.08
CDHR3-212ENST00000487084 USP17L4A6NCW7 530 aa28.06■■■□□ 2.08
CDHR3-212ENST00000487084 RSBN1LQ6PCB5 846 aaPredicted RBP28.06■■■□□ 2.08
CDHR3-212ENST00000487084 USP17L1Q7RTZ2 530 aa28.06■■■□□ 2.08
CDHR3-212ENST00000487084 ZKSCAN2Q63HK3 967 aa28.05■■■□□ 2.08
CDHR3-212ENST00000487084 INTS3Q68E01 1043 aaKnown RBP28.05■■■□□ 2.08
CDHR3-212ENST00000487084 KLHDC4Q8TBB5 520 aa28.05■■■□□ 2.08
CDHR3-212ENST00000487084 PASKQ96RG2 1323 aa28.05■■■□□ 2.08
CDHR3-212ENST00000487084 MEIS3Q99687 375 aa28.05■■■□□ 2.08
CDHR3-212ENST00000487084 ITGBL1O95965 494 aaPredicted RBP28.04■■■□□ 2.08
CDHR3-212ENST00000487084 TBC1D10BQ4KMP7 808 aaPredicted RBP28.04■■■□□ 2.08
CDHR3-212ENST00000487084 RBM26Q5T8P6 1007 aaKnown RBP28.04■■■□□ 2.08
CDHR3-212ENST00000487084 SAMD7Q7Z3H4 446 aa28.04■■■□□ 2.08
CDHR3-212ENST00000487084 LRRFIP2Q9Y608 721 aaKnown RBP28.04■■■□□ 2.08
CDHR3-212ENST00000487084 LRRC24Q50LG9 513 aa28.03■■■□□ 2.08
CDHR3-212ENST00000487084 HDAC5Q9UQL6 1122 aa28.03■■■□□ 2.08
CDHR3-212ENST00000487084 A0A1B0GUL6 1792 aa28.02■■■□□ 2.08
CDHR3-212ENST00000487084 MROH5Q6ZUA9 1318 aa28.02■■■□□ 2.08
CDHR3-212ENST00000487084 HIRAP54198 1017 aaPredicted RBP28.02■■■□□ 2.08
CDHR3-212ENST00000487084 AGBL3Q8NEM8 1001 aa28.02■■■□□ 2.08
CDHR3-212ENST00000487084 RIPOR2Q9Y4F9 1068 aa28.02■■■□□ 2.08
CDHR3-212ENST00000487084 METTL24Q5JXM2 366 aa28.01■■■□□ 2.07
CDHR3-212ENST00000487084 ZNF804AQ7Z570 1209 aa28.01■■■□□ 2.07
CDHR3-212ENST00000487084 MXD3Q9BW11 206 aa28■■■□□ 2.07
CDHR3-212ENST00000487084 CD209Q9NNX6 404 aa28■■■□□ 2.07
CDHR3-212ENST00000487084 IRS2Q9Y4H2 1338 aa27.99■■■□□ 2.07
CDHR3-212ENST00000487084 EGFRP00533 1210 aa27.99■■■□□ 2.07
CDHR3-212ENST00000487084 GNAI3P08754 354 aa27.99■■■□□ 2.07
CDHR3-212ENST00000487084 KIF4BQ2VIQ3 1234 aa27.99■■■□□ 2.07
CDHR3-212ENST00000487084 STRIP1Q5VSL9 837 aa27.99■■■□□ 2.07
CDHR3-212ENST00000487084 C15orf52Q6ZUT6 534 aaKnown RBP27.99■■■□□ 2.07
CDHR3-212ENST00000487084 DNAJC5GQ8N7S2 189 aa27.99■■■□□ 2.07
CDHR3-212ENST00000487084 CREBZFQ9NS37 354 aa27.99■■■□□ 2.07
CDHR3-212ENST00000487084 GTF2IP78347 998 aa27.98■■■□□ 2.07
CDHR3-212ENST00000487084 UBE4AQ14139 1066 aa27.98■■■□□ 2.07
CDHR3-212ENST00000487084 DACT2Q5SW24 774 aa27.98■■■□□ 2.07
CDHR3-212ENST00000487084 TTLL5Q6EMB2 1281 aa27.98■■■□□ 2.07
CDHR3-212ENST00000487084 FTSJ3Q8IY81 847 aaKnown RBP27.98■■■□□ 2.07
CDHR3-212ENST00000487084 PSME4Q14997 1843 aa27.97■■■□□ 2.07
CDHR3-212ENST00000487084 TRAF5O00463 557 aa27.97■■■□□ 2.07
CDHR3-212ENST00000487084 USP17L8P0C7I0 530 aa27.97■■■□□ 2.07
CDHR3-212ENST00000487084 RFX5P48382 616 aaPredicted RBP27.97■■■□□ 2.07
CDHR3-212ENST00000487084 FMR1Q06787 632 aaKnown RBP eCLIP27.97■■■□□ 2.07
CDHR3-212ENST00000487084 TMEM57Q8N5G2 664 aa27.97■■■□□ 2.07
CDHR3-212ENST00000487084 ZC3H15Q8WU90 426 aaKnown RBP27.97■■■□□ 2.07
CDHR3-212ENST00000487084 KLRG1Q96E93 195 aa27.97■■■□□ 2.07
CDHR3-212ENST00000487084 ZNF609O15014 1411 aa27.97■■■□□ 2.07
CDHR3-212ENST00000487084 TMEM88BA6NKF7 163 aa27.96■■■□□ 2.07
CDHR3-212ENST00000487084 GMLQ99445 158 aa27.96■■■□□ 2.07
CDHR3-212ENST00000487084 GLIS2Q9BZE0 524 aaPredicted RBP27.96■■■□□ 2.07
CDHR3-212ENST00000487084 MYO3BQ8WXR4 1341 aa27.95■■■□□ 2.07
CDHR3-212ENST00000487084 PTPN12Q05209 780 aaKnown RBP27.95■■■□□ 2.06
CDHR3-212ENST00000487084 SIL1Q9H173 461 aa27.95■■■□□ 2.06
CDHR3-212ENST00000487084 EYA2O00167 538 aa27.94■■■□□ 2.06
CDHR3-212ENST00000487084 ZNF280AP59817 542 aaPredicted RBP27.94■■■□□ 2.06
CDHR3-212ENST00000487084 PGAP2Q9UHJ9 254 aa27.94■■■□□ 2.06
CDHR3-212ENST00000487084 PDE8BO95263 885 aa27.93■■■□□ 2.06
CDHR3-212ENST00000487084 IL1R1P14778 569 aa27.93■■■□□ 2.06
CDHR3-212ENST00000487084 GYG1P46976 350 aa27.93■■■□□ 2.06
CDHR3-212ENST00000487084 MYOZ2Q9NPC6 264 aa27.93■■■□□ 2.06
CDHR3-212ENST00000487084 MKRN1Q9UHC7 482 aaKnown RBP27.93■■■□□ 2.06
CDHR3-212ENST00000487084 JAG2Q9Y219 1238 aa27.93■■■□□ 2.06
CDHR3-212ENST00000487084 CDC37L1Q7L3B6 337 aa27.92■■■□□ 2.06
CDHR3-212ENST00000487084 DZIP1LQ8IYY4 767 aaKnown RBP27.92■■■□□ 2.06
CDHR3-212ENST00000487084 OGFOD1Q8N543 542 aa27.92■■■□□ 2.06
CDHR3-212ENST00000487084 VGLL2Q8N8G2 317 aa27.92■■■□□ 2.06
CDHR3-212ENST00000487084 GNAI2P04899 355 aa27.91■■■□□ 2.06
CDHR3-212ENST00000487084 HIBADHP31937 336 aaKnown RBP27.91■■■□□ 2.06
CDHR3-212ENST00000487084 VPS37DQ86XT2 251 aa27.91■■■□□ 2.06
CDHR3-212ENST00000487084 KIAA0825Q8IV33 1275 aa27.91■■■□□ 2.06
CDHR3-212ENST00000487084 ITPRIPQ8IWB1 547 aa27.91■■■□□ 2.06
CDHR3-212ENST00000487084 DCPSQ96C86 337 aaKnown RBP27.91■■■□□ 2.06
CDHR3-212ENST00000487084 GGA3Q9NZ52 723 aa27.91■■■□□ 2.06
CDHR3-212ENST00000487084 ABT1Q9ULW3 272 aaKnown RBP27.91■■■□□ 2.06
CDHR3-212ENST00000487084 PA2G4Q9UQ80 394 aaKnown RBP27.91■■■□□ 2.06
CDHR3-212ENST00000487084 USP48Q86UV5 1035 aa27.9■■■□□ 2.06
CDHR3-212ENST00000487084 FAM84BQ96KN1 310 aaPredicted RBP27.9■■■□□ 2.06
CDHR3-212ENST00000487084 ZNF408Q9H9D4 720 aa27.9■■■□□ 2.06
CDHR3-212ENST00000487084 ASTN2O75129 1339 aaPredicted RBP27.9■■■□□ 2.06
CDHR3-212ENST00000487084 SRGAP3O43295 1099 aa27.89■■■□□ 2.06
CDHR3-212ENST00000487084 SCARF1Q14162 830 aa27.89■■■□□ 2.06
CDHR3-212ENST00000487084 PUM3Q15397 648 aaKnown RBP27.89■■■□□ 2.06
CDHR3-212ENST00000487084 KRT26Q7Z3Y9 468 aa27.89■■■□□ 2.06
CDHR3-212ENST00000487084 ZNF646O15015 1829 aaPredicted RBP27.88■■■□□ 2.05
CDHR3-212ENST00000487084 RLBP1P12271 317 aa27.88■■■□□ 2.05
CDHR3-212ENST00000487084 CAVIN4Q5BKX8 364 aa27.88■■■□□ 2.05
CDHR3-212ENST00000487084 ATG9AQ7Z3C6 839 aa27.88■■■□□ 2.05
CDHR3-212ENST00000487084 HDAC9Q9UKV0 1011 aa27.88■■■□□ 2.05
CDHR3-212ENST00000487084 CIAO1O76071 339 aa27.87■■■□□ 2.05
CDHR3-212ENST00000487084 CELF2O95319 508 aaKnown RBP27.87■■■□□ 2.05
CDHR3-212ENST00000487084 IFIT1P09914 478 aaKnown RBP27.87■■■□□ 2.05
CDHR3-212ENST00000487084 FBXO3Q9UK99 471 aa27.87■■■□□ 2.05
CDHR3-212ENST00000487084 ADM5C9JUS6 153 aa27.86■■■□□ 2.05
CDHR3-212ENST00000487084 F8W031 263 aaPredicted RBP27.86■■■□□ 2.05
CDHR3-212ENST00000487084 ANGEL2Q5VTE6 544 aaKnown RBP27.86■■■□□ 2.05
CDHR3-212ENST00000487084 CERS5Q8N5B7 392 aa27.86■■■□□ 2.05
CDHR3-212ENST00000487084 TDRD7Q8NHU6 1098 aaKnown RBP27.86■■■□□ 2.05
CDHR3-212ENST00000487084 CEP126Q9P2H0 1117 aa27.86■■■□□ 2.05
CDHR3-212ENST00000487084 IQSEC3Q9UPP2 1182 aaPredicted RBP27.86■■■□□ 2.05
CDHR3-212ENST00000487084 FRAT2O75474 233 aaPredicted RBP27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms