RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 MYH7P12883 1935 aa8.52□□□□□ -1.05
SF3A3-206ENST00000487062 SLC5A1P13866 664 aa8.51□□□□□ -1.05
SF3A3-206ENST00000487062 ANAPC15P60006 121 aa8.51□□□□□ -1.05
SF3A3-206ENST00000487062 PUM3Q15397 648 aaKnown RBP8.51□□□□□ -1.05
SF3A3-206ENST00000487062 CWC27Q6UX04 472 aaKnown RBP8.51□□□□□ -1.05
SF3A3-206ENST00000487062 LPIN2Q92539 896 aa8.51□□□□□ -1.05
SF3A3-206ENST00000487062 SNX21Q969T3 373 aa8.51□□□□□ -1.05
SF3A3-206ENST00000487062 SEC31BQ9NQW1 1179 aa8.51□□□□□ -1.05
SF3A3-206ENST00000487062 PAG1Q9NWQ8 432 aa8.51□□□□□ -1.05
SF3A3-206ENST00000487062 UQCRFS1P1P0C7P4 283 aa8.5□□□□□ -1.05
SF3A3-206ENST00000487062 GYS1P13807 737 aa8.5□□□□□ -1.05
SF3A3-206ENST00000487062 TAF1P21675 1872 aa8.5□□□□□ -1.05
SF3A3-206ENST00000487062 ST5P78524 1137 aa8.5□□□□□ -1.05
SF3A3-206ENST00000487062 NFIXQ14938 502 aa8.5□□□□□ -1.05
SF3A3-206ENST00000487062 POTEAQ6S8J7 498 aa8.5□□□□□ -1.05
SF3A3-206ENST00000487062 DDX46Q7L014 1031 aaKnown RBP8.5□□□□□ -1.05
SF3A3-206ENST00000487062 AMIGO3Q86WK7 504 aa8.5□□□□□ -1.05
SF3A3-206ENST00000487062 VGLL2Q8N8G2 317 aa8.5□□□□□ -1.05
SF3A3-206ENST00000487062 CNBD1Q8NA66 436 aa8.5□□□□□ -1.05
SF3A3-206ENST00000487062 KBTBD3Q8NAB2 608 aa8.5□□□□□ -1.05
SF3A3-206ENST00000487062 ZNF512BQ96KM6 892 aaPredicted RBP8.5□□□□□ -1.05
SF3A3-206ENST00000487062 TFCP2L1Q9NZI6 479 aa8.5□□□□□ -1.05
SF3A3-206ENST00000487062 RGS17Q9UGC6 210 aaPredicted RBP8.5□□□□□ -1.05
SF3A3-206ENST00000487062 AKAP11Q9UKA4 1901 aa8.49□□□□□ -1.05
SF3A3-206ENST00000487062 GOLIM4O00461 696 aa8.49□□□□□ -1.05
SF3A3-206ENST00000487062 ST18O60284 1047 aa8.49□□□□□ -1.05
SF3A3-206ENST00000487062 ADORA1P30542 326 aa8.49□□□□□ -1.05
SF3A3-206ENST00000487062 NMIQ13287 307 aaPredicted RBP8.49□□□□□ -1.05
SF3A3-206ENST00000487062 TTF1Q15361 905 aaPredicted RBP8.49□□□□□ -1.05
SF3A3-206ENST00000487062 KIF2CQ99661 725 aa8.49□□□□□ -1.05
SF3A3-206ENST00000487062 TBC1D2Q9BYX2 928 aa8.49□□□□□ -1.05
SF3A3-206ENST00000487062 BSDC1Q9NW68 430 aaPredicted RBP8.49□□□□□ -1.05
SF3A3-206ENST00000487062 QSER1Q2KHR3 1735 aa8.49□□□□□ -1.05
SF3A3-206ENST00000487062 SERPINB2P05120 415 aa8.48□□□□□ -1.05
SF3A3-206ENST00000487062 ZFYP08048 801 aaPredicted RBP8.48□□□□□ -1.05
SF3A3-206ENST00000487062 PYGBP11216 843 aa8.48□□□□□ -1.05
SF3A3-206ENST00000487062 FGFR2P21802 821 aa8.48□□□□□ -1.05
SF3A3-206ENST00000487062 ARID4AP29374 1257 aaPredicted RBP8.48□□□□□ -1.05
SF3A3-206ENST00000487062 TM4SF1P30408 202 aa8.48□□□□□ -1.05
SF3A3-206ENST00000487062 HSPA4P34932 840 aa8.48□□□□□ -1.05
SF3A3-206ENST00000487062 KCNJ4P48050 445 aa8.48□□□□□ -1.05
SF3A3-206ENST00000487062 SLC4A3P48751 1232 aa8.48□□□□□ -1.05
SF3A3-206ENST00000487062 RPS8P62241 208 aaKnown RBP8.48□□□□□ -1.05
SF3A3-206ENST00000487062 CHRNDQ07001 517 aa8.48□□□□□ -1.05
SF3A3-206ENST00000487062 UBE4AQ14139 1066 aa8.48□□□□□ -1.05
SF3A3-206ENST00000487062 ZSCAN25Q6NSZ9 544 aa8.48□□□□□ -1.05
SF3A3-206ENST00000487062 NLGN1Q8N2Q7 840 aa8.48□□□□□ -1.05
SF3A3-206ENST00000487062 HELBQ8NG08 1087 aaPredicted RBP8.48□□□□□ -1.05
SF3A3-206ENST00000487062 AKT1S1Q96B36 256 aa8.48□□□□□ -1.05
SF3A3-206ENST00000487062 EDC3Q96F86 508 aaKnown RBP8.48□□□□□ -1.05
SF3A3-206ENST00000487062 ANKRD2Q9GZV1 360 aa8.48□□□□□ -1.05
SF3A3-206ENST00000487062 LSG1Q9H089 658 aaKnown RBP8.48□□□□□ -1.05
SF3A3-206ENST00000487062 SNRKQ9NRH2 765 aa8.48□□□□□ -1.05
SF3A3-206ENST00000487062 HELLSQ9NRZ9 838 aa8.48□□□□□ -1.05
SF3A3-206ENST00000487062 TNRC6CQ9HCJ0 1690 aaKnown RBP8.48□□□□□ -1.05
SF3A3-206ENST00000487062 MYH13Q9UKX3 1938 aa8.48□□□□□ -1.05
SF3A3-206ENST00000487062 CCDC171Q6TFL3 1326 aa8.48□□□□□ -1.05
SF3A3-206ENST00000487062 A0A0D9SFI3 127 aa8.47□□□□□ -1.05
SF3A3-206ENST00000487062 FKBP4Q02790 459 aaKnown RBP eCLIP8.47□□□□□ -1.05
SF3A3-206ENST00000487062 SF3B2Q13435 895 aaKnown RBP8.47□□□□□ -1.05
SF3A3-206ENST00000487062 ZNF827Q17R98 1081 aa8.47□□□□□ -1.05
SF3A3-206ENST00000487062 MCMDC2Q4G0Z9 681 aa8.47□□□□□ -1.05
SF3A3-206ENST00000487062 RNF20Q5VTR2 975 aa8.47□□□□□ -1.05
SF3A3-206ENST00000487062 CCDC102BQ68D86 513 aa8.47□□□□□ -1.05
SF3A3-206ENST00000487062 PRR5LQ6MZQ0 368 aa8.47□□□□□ -1.05
SF3A3-206ENST00000487062 C3orf67Q6ZVT6 689 aa8.47□□□□□ -1.05
SF3A3-206ENST00000487062 SPDYE1Q8NFV5 336 aaPredicted RBP8.47□□□□□ -1.05
SF3A3-206ENST00000487062 RPGRQ92834 1020 aaKnown RBP8.47□□□□□ -1.05
SF3A3-206ENST00000487062 FAM227BQ96M60 508 aa8.47□□□□□ -1.05
SF3A3-206ENST00000487062 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.47□□□□□ -1.05
SF3A3-206ENST00000487062 GNL3LQ9NVN8 582 aaKnown RBP8.47□□□□□ -1.05
SF3A3-206ENST00000487062 DOCK2Q92608 1830 aa8.47□□□□□ -1.05
SF3A3-206ENST00000487062 MED23Q9ULK4 1368 aa8.47□□□□□ -1.05
SF3A3-206ENST00000487062 NRXN2Q9P2S2 1712 aa8.46□□□□□ -1.05
SF3A3-206ENST00000487062 TESPA1A2RU30 521 aaPredicted RBP8.46□□□□□ -1.06
SF3A3-206ENST00000487062 K7ELQ4 463 aaPredicted RBP8.46□□□□□ -1.06
SF3A3-206ENST00000487062 RNF113AO15541 343 aaKnown RBP8.46□□□□□ -1.06
SF3A3-206ENST00000487062 TAF5LO75529 589 aa8.46□□□□□ -1.06
SF3A3-206ENST00000487062 ZKSCAN1P17029 563 aaPredicted RBP8.46□□□□□ -1.06
SF3A3-206ENST00000487062 ZAP70P43403 619 aa8.46□□□□□ -1.06
SF3A3-206ENST00000487062 MCM2P49736 904 aa8.46□□□□□ -1.06
SF3A3-206ENST00000487062 CAVIN4Q5BKX8 364 aa8.46□□□□□ -1.06
SF3A3-206ENST00000487062 ZMYM1Q5SVZ6 1142 aa8.46□□□□□ -1.06
SF3A3-206ENST00000487062 CELF1Q92879 486 aaKnown RBP8.46□□□□□ -1.06
SF3A3-206ENST00000487062 MAP4K1Q92918 833 aa8.46□□□□□ -1.06
SF3A3-206ENST00000487062 IL17RAQ96F46 866 aa8.46□□□□□ -1.06
SF3A3-206ENST00000487062 IL25Q9H293 177 aa8.46□□□□□ -1.06
SF3A3-206ENST00000487062 SLC24A3Q9HC58 644 aa8.46□□□□□ -1.06
SF3A3-206ENST00000487062 MINPP1Q9UNW1 487 aa8.46□□□□□ -1.06
SF3A3-206ENST00000487062 NDUFB9Q9Y6M9 179 aa8.46□□□□□ -1.06
SF3A3-206ENST00000487062 MYO5AQ9Y4I1 1855 aaKnown RBP8.45□□□□□ -1.06
SF3A3-206ENST00000487062 POLRMTO00411 1230 aaKnown RBP8.45□□□□□ -1.06
SF3A3-206ENST00000487062 HSP90AA1P07900 732 aaKnown RBP8.45□□□□□ -1.06
SF3A3-206ENST00000487062 MCAMP43121 646 aa8.45□□□□□ -1.06
SF3A3-206ENST00000487062 PHKA1P46020 1223 aa8.45□□□□□ -1.06
SF3A3-206ENST00000487062 BAG6P46379 1132 aa8.45□□□□□ -1.06
SF3A3-206ENST00000487062 NEK4P51957 841 aa8.45□□□□□ -1.06
SF3A3-206ENST00000487062 PTH1RQ03431 593 aa8.45□□□□□ -1.06
SF3A3-206ENST00000487062 GRAPQ13588 217 aa8.45□□□□□ -1.06
SF3A3-206ENST00000487062 COL23A1Q86Y22 540 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms