RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 KLRK1P26718 216 aa20.03■□□□□ 0.8
HDAC8-218ENST00000486704 HTRA3P83110 453 aa20.03■□□□□ 0.8
HDAC8-218ENST00000486704 RSBN1LQ6PCB5 846 aaPredicted RBP20.03■□□□□ 0.8
HDAC8-218ENST00000486704 USP17L1Q7RTZ2 530 aa20.03■□□□□ 0.8
HDAC8-218ENST00000486704 TRPM4Q8TD43 1214 aa20.03■□□□□ 0.8
HDAC8-218ENST00000486704 ZC3H15Q8WU90 426 aaKnown RBP20.03■□□□□ 0.8
HDAC8-218ENST00000486704 CREBZFQ9NS37 354 aa20.03■□□□□ 0.8
HDAC8-218ENST00000486704 POLR2AP24928 1970 aaKnown RBP20.03■□□□□ 0.8
HDAC8-218ENST00000486704 SHTN1A0MZ66 631 aa20.02■□□□□ 0.8
HDAC8-218ENST00000486704 TAF5LO75529 589 aa20.02■□□□□ 0.8
HDAC8-218ENST00000486704 BCAR3O75815 825 aa20.02■□□□□ 0.8
HDAC8-218ENST00000486704 TRIM27P14373 513 aa20.02■□□□□ 0.8
HDAC8-218ENST00000486704 ATF7IPQ6VMQ6 1270 aa20.02■□□□□ 0.8
HDAC8-218ENST00000486704 GMLQ99445 158 aa20.02■□□□□ 0.8
HDAC8-218ENST00000486704 HDAC5Q9UQL6 1122 aa20.02■□□□□ 0.8
HDAC8-218ENST00000486704 MROH5Q6ZUA9 1318 aa20.02■□□□□ 0.79
HDAC8-218ENST00000486704 HIRAP54198 1017 aaPredicted RBP20.01■□□□□ 0.79
HDAC8-218ENST00000486704 HELBQ8NG08 1087 aaPredicted RBP20.01■□□□□ 0.79
HDAC8-218ENST00000486704 KLRG1Q96E93 195 aa20.01■□□□□ 0.79
HDAC8-218ENST00000486704 RIPOR2Q9Y4F9 1068 aa20.01■□□□□ 0.79
HDAC8-218ENST00000486704 MYO3BQ8WXR4 1341 aa20.01■□□□□ 0.79
HDAC8-218ENST00000486704 ECM29Q5VYK3 1845 aa20■□□□□ 0.79
HDAC8-218ENST00000486704 ZNF280AP59817 542 aaPredicted RBP20■□□□□ 0.79
HDAC8-218ENST00000486704 DACT2Q5SW24 774 aa20■□□□□ 0.79
HDAC8-218ENST00000486704 STRIP1Q5VSL9 837 aa20■□□□□ 0.79
HDAC8-218ENST00000486704 PUS3Q9BZE2 481 aaKnown RBP20■□□□□ 0.79
HDAC8-218ENST00000486704 MYH13Q9UKX3 1938 aa20■□□□□ 0.79
HDAC8-218ENST00000486704 SNAP23O00161 211 aa19.99■□□□□ 0.79
HDAC8-218ENST00000486704 UBE4AQ14139 1066 aa19.99■□□□□ 0.79
HDAC8-218ENST00000486704 TMEM88BA6NKF7 163 aa19.98■□□□□ 0.79
HDAC8-218ENST00000486704 RFX5P48382 616 aaPredicted RBP19.98■□□□□ 0.79
HDAC8-218ENST00000486704 SAMD7Q7Z3H4 446 aa19.98■□□□□ 0.79
HDAC8-218ENST00000486704 ZNF804AQ7Z570 1209 aa19.98■□□□□ 0.79
HDAC8-218ENST00000486704 FRAT1Q92837 279 aaPredicted RBP19.98■□□□□ 0.79
HDAC8-218ENST00000486704 MEIS3Q99687 375 aa19.98■□□□□ 0.79
HDAC8-218ENST00000486704 CD209Q9NNX6 404 aa19.98■□□□□ 0.79
HDAC8-218ENST00000486704 EGFRP00533 1210 aa19.97■□□□□ 0.79
HDAC8-218ENST00000486704 GNAI3P08754 354 aa19.97■□□□□ 0.79
HDAC8-218ENST00000486704 IL1R1P14778 569 aa19.97■□□□□ 0.79
HDAC8-218ENST00000486704 KIF4BQ2VIQ3 1234 aa19.97■□□□□ 0.79
HDAC8-218ENST00000486704 TBC1D10BQ4KMP7 808 aaPredicted RBP19.97■□□□□ 0.79
HDAC8-218ENST00000486704 ZKSCAN2Q63HK3 967 aa19.97■□□□□ 0.79
HDAC8-218ENST00000486704 VGLL2Q8N8G2 317 aa19.97■□□□□ 0.79
HDAC8-218ENST00000486704 USP17L8P0C7I0 530 aa19.96■□□□□ 0.79
HDAC8-218ENST00000486704 MMP14P50281 582 aa19.96■□□□□ 0.79
HDAC8-218ENST00000486704 LRRC24Q50LG9 513 aa19.96■□□□□ 0.79
HDAC8-218ENST00000486704 JMYQ8N9B5 988 aa19.96■□□□□ 0.79
HDAC8-218ENST00000486704 FBXO3Q9UK99 471 aa19.96■□□□□ 0.79
HDAC8-218ENST00000486704 LRRFIP2Q9Y608 721 aaKnown RBP19.96■□□□□ 0.79
HDAC8-218ENST00000486704 PLIN1O60240 522 aa19.95■□□□□ 0.78
HDAC8-218ENST00000486704 PTPN12Q05209 780 aaKnown RBP19.95■□□□□ 0.78
HDAC8-218ENST00000486704 TTLL5Q6EMB2 1281 aa19.95■□□□□ 0.78
HDAC8-218ENST00000486704 KLHDC4Q8TBB5 520 aa19.95■□□□□ 0.78
HDAC8-218ENST00000486704 TNNQ9UQP3 1299 aa19.95■□□□□ 0.78
HDAC8-218ENST00000486704 CNTNAP1P78357 1384 aa19.95■□□□□ 0.78
HDAC8-218ENST00000486704 THSD7BQ9C0I4 1608 aa19.94■□□□□ 0.78
HDAC8-218ENST00000486704 PDE8BO95263 885 aa19.94■□□□□ 0.78
HDAC8-218ENST00000486704 METTL24Q5JXM2 366 aa19.94■□□□□ 0.78
HDAC8-218ENST00000486704 CDC37L1Q7L3B6 337 aa19.94■□□□□ 0.78
HDAC8-218ENST00000486704 EYA2O00167 538 aa19.93■□□□□ 0.78
HDAC8-218ENST00000486704 TRAF5O00463 557 aa19.93■□□□□ 0.78
HDAC8-218ENST00000486704 CIAO1O76071 339 aa19.93■□□□□ 0.78
HDAC8-218ENST00000486704 GTF2IP78347 998 aa19.93■□□□□ 0.78
HDAC8-218ENST00000486704 MTX1Q13505 466 aa19.93■□□□□ 0.78
HDAC8-218ENST00000486704 FBXW7Q969H0 707 aa19.93■□□□□ 0.78
HDAC8-218ENST00000486704 CLUAP1Q96AJ1 413 aa19.93■□□□□ 0.78
HDAC8-218ENST00000486704 GLIS2Q9BZE0 524 aaPredicted RBP19.93■□□□□ 0.78
HDAC8-218ENST00000486704 MYOZ2Q9NPC6 264 aa19.93■□□□□ 0.78
HDAC8-218ENST00000486704 FKBP1AP62942 108 aaKnown RBP19.92■□□□□ 0.78
HDAC8-218ENST00000486704 MXD3Q9BW11 206 aa19.92■□□□□ 0.78
HDAC8-218ENST00000486704 FMR1Q06787 632 aaKnown RBP eCLIP19.91■□□□□ 0.78
HDAC8-218ENST00000486704 PUM3Q15397 648 aaKnown RBP19.91■□□□□ 0.78
HDAC8-218ENST00000486704 RBM26Q5T8P6 1007 aaKnown RBP19.91■□□□□ 0.78
HDAC8-218ENST00000486704 ATG9AQ7Z3C6 839 aa19.91■□□□□ 0.78
HDAC8-218ENST00000486704 OGFOD1Q8N543 542 aa19.91■□□□□ 0.78
HDAC8-218ENST00000486704 TMEM57Q8N5G2 664 aa19.91■□□□□ 0.78
HDAC8-218ENST00000486704 TDRD7Q8NHU6 1098 aaKnown RBP19.91■□□□□ 0.78
HDAC8-218ENST00000486704 FAM84BQ96KN1 310 aaPredicted RBP19.91■□□□□ 0.78
HDAC8-218ENST00000486704 GGA3Q9NZ52 723 aa19.91■□□□□ 0.78
HDAC8-218ENST00000486704 FAM205AQ6ZU69 1335 aa19.91■□□□□ 0.78
HDAC8-218ENST00000486704 PITPNM2Q9BZ72 1349 aa19.91■□□□□ 0.78
HDAC8-218ENST00000486704 RASSF10A6NK89 507 aa19.9■□□□□ 0.78
HDAC8-218ENST00000486704 FGFR2P21802 821 aa19.9■□□□□ 0.78
HDAC8-218ENST00000486704 HIBADHP31937 336 aaKnown RBP19.9■□□□□ 0.78
HDAC8-218ENST00000486704 CST9Q5W186 159 aa19.9■□□□□ 0.78
HDAC8-218ENST00000486704 DCPSQ96C86 337 aaKnown RBP19.9■□□□□ 0.78
HDAC8-218ENST00000486704 COPRSQ9NQ92 184 aa19.9■□□□□ 0.78
HDAC8-218ENST00000486704 SASH1O94885 1247 aa19.89■□□□□ 0.77
HDAC8-218ENST00000486704 GYG1P46976 350 aa19.89■□□□□ 0.77
HDAC8-218ENST00000486704 KRT26Q7Z3Y9 468 aa19.89■□□□□ 0.77
HDAC8-218ENST00000486704 FBXO33Q7Z6M2 555 aa19.89■□□□□ 0.77
HDAC8-218ENST00000486704 FTSJ3Q8IY81 847 aaKnown RBP19.89■□□□□ 0.77
HDAC8-218ENST00000486704 CERS5Q8N5B7 392 aa19.89■□□□□ 0.77
HDAC8-218ENST00000486704 HDAC9Q9UKV0 1011 aa19.89■□□□□ 0.77
HDAC8-218ENST00000486704 GNAI2P04899 355 aa19.88■□□□□ 0.77
HDAC8-218ENST00000486704 SCARF1Q14162 830 aa19.88■□□□□ 0.77
HDAC8-218ENST00000486704 KIAA0825Q8IV33 1275 aa19.88■□□□□ 0.77
HDAC8-218ENST00000486704 DZIP1LQ8IYY4 767 aaKnown RBP19.88■□□□□ 0.77
HDAC8-218ENST00000486704 MKRN1Q9UHC7 482 aaKnown RBP19.88■□□□□ 0.77
HDAC8-218ENST00000486704 ASTN2O75129 1339 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms