RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 ILDR1Q86SU0 546 aaPredicted RBP12.34□□□□□ -0.43
CCDC171-208ENST00000486641 PI4KAP1Q8N8J0 262 aa12.34□□□□□ -0.43
CCDC171-208ENST00000486641 IL17REQ8NFR9 667 aa12.34□□□□□ -0.43
CCDC171-208ENST00000486641 MRPS27Q92552 414 aaKnown RBP12.34□□□□□ -0.43
CCDC171-208ENST00000486641 WDR24Q96S15 920 aa12.34□□□□□ -0.43
CCDC171-208ENST00000486641 FSD1Q9BTV5 496 aa12.34□□□□□ -0.43
CCDC171-208ENST00000486641 LRRC2Q9BYS8 371 aa12.34□□□□□ -0.43
CCDC171-208ENST00000486641 CCDC8Q9H0W5 538 aaPredicted RBP12.34□□□□□ -0.43
CCDC171-208ENST00000486641 BOLA2Q9H3K6 86 aa12.34□□□□□ -0.43
CCDC171-208ENST00000486641 SPATA31D1Q6ZQQ2 1576 aa12.34□□□□□ -0.43
CCDC171-208ENST00000486641 MED23Q9ULK4 1368 aa12.34□□□□□ -0.43
CCDC171-208ENST00000486641 GNAT3A8MTJ3 354 aa12.33□□□□□ -0.44
CCDC171-208ENST00000486641 TAF5LO75529 589 aa12.33□□□□□ -0.44
CCDC171-208ENST00000486641 RAPGEF3O95398 923 aa12.33□□□□□ -0.44
CCDC171-208ENST00000486641 CTDNEP1O95476 244 aa12.33□□□□□ -0.44
CCDC171-208ENST00000486641 EIF2S2P20042 333 aaKnown RBP12.33□□□□□ -0.44
CCDC171-208ENST00000486641 MLECQ14165 292 aa12.33□□□□□ -0.44
CCDC171-208ENST00000486641 FOXR1Q6PIV2 292 aa12.33□□□□□ -0.44
CCDC171-208ENST00000486641 PACS2Q86VP3 889 aa12.33□□□□□ -0.44
CCDC171-208ENST00000486641 DNAAF4Q8WXU2 420 aa12.33□□□□□ -0.44
CCDC171-208ENST00000486641 DPF2Q92785 391 aa12.33□□□□□ -0.44
CCDC171-208ENST00000486641 EAF2Q96CJ1 260 aaPredicted RBP12.33□□□□□ -0.44
CCDC171-208ENST00000486641 EYA1Q99502 592 aa12.33□□□□□ -0.44
CCDC171-208ENST00000486641 MPHOSPH8Q99549 860 aa12.33□□□□□ -0.44
CCDC171-208ENST00000486641 MRFAP1Q9Y605 127 aa12.33□□□□□ -0.44
CCDC171-208ENST00000486641 PRR36Q9H6K5 1346 aa12.33□□□□□ -0.44
CCDC171-208ENST00000486641 MAP2K7O14733 419 aa12.33□□□□□ -0.44
CCDC171-208ENST00000486641 GUCY1B3Q02153 619 aa12.33□□□□□ -0.44
CCDC171-208ENST00000486641 PTPN21Q16825 1174 aa12.33□□□□□ -0.44
CCDC171-208ENST00000486641 ADALQ6DHV7 355 aa12.33□□□□□ -0.44
CCDC171-208ENST00000486641 NSUN7Q8NE18 718 aaKnown RBP12.33□□□□□ -0.44
CCDC171-208ENST00000486641 RABGGTAQ92696 567 aa12.33□□□□□ -0.44
CCDC171-208ENST00000486641 HSD3B7Q9H2F3 369 aa12.33□□□□□ -0.44
CCDC171-208ENST00000486641 PPP2R2CQ9Y2T4 447 aa12.33□□□□□ -0.44
CCDC171-208ENST00000486641 A0A1B0GUL7 405 aa12.32□□□□□ -0.44
CCDC171-208ENST00000486641 ZSCAN12O43309 604 aa12.32□□□□□ -0.44
CCDC171-208ENST00000486641 PPFIA3O75145 1194 aa12.32□□□□□ -0.44
CCDC171-208ENST00000486641 NLRP12P59046 1061 aa12.32□□□□□ -0.44
CCDC171-208ENST00000486641 GNG11P61952 73 aa12.32□□□□□ -0.44
CCDC171-208ENST00000486641 MTX1Q13505 466 aa12.32□□□□□ -0.44
CCDC171-208ENST00000486641 KRT32Q14532 448 aa12.32□□□□□ -0.44
CCDC171-208ENST00000486641 USPL1Q5W0Q7 1092 aa12.32□□□□□ -0.44
CCDC171-208ENST00000486641 ATL3Q6DD88 541 aa12.32□□□□□ -0.44
CCDC171-208ENST00000486641 ISM2Q6H9L7 571 aa12.32□□□□□ -0.44
CCDC171-208ENST00000486641 LEKR1Q6ZMV7 388 aa12.32□□□□□ -0.44
CCDC171-208ENST00000486641 ERC1Q8IUD2 1116 aa12.32□□□□□ -0.44
CCDC171-208ENST00000486641 TEX2Q8IWB9 1127 aa12.32□□□□□ -0.44
CCDC171-208ENST00000486641 GOLGA6L1Q8N7Z2 621 aa12.32□□□□□ -0.44
CCDC171-208ENST00000486641 SEC62Q99442 399 aaKnown RBP12.32□□□□□ -0.44
CCDC171-208ENST00000486641 TLR7Q9NYK1 1049 aaKnown RBP12.32□□□□□ -0.44
CCDC171-208ENST00000486641 VPS18Q9P253 973 aa12.32□□□□□ -0.44
CCDC171-208ENST00000486641 NEDD4P46934 1319 aa12.32□□□□□ -0.44
CCDC171-208ENST00000486641 ALDH1L1O75891 902 aa12.32□□□□□ -0.44
CCDC171-208ENST00000486641 SASH1O94885 1247 aa12.32□□□□□ -0.44
CCDC171-208ENST00000486641 LLPHQ9BRT6 129 aaKnown RBP12.32□□□□□ -0.44
CCDC171-208ENST00000486641 JCADQ9P266 1359 aa12.32□□□□□ -0.44
CCDC171-208ENST00000486641 OVOS2A0A0J9YW53 1432 aa12.32□□□□□ -0.44
CCDC171-208ENST00000486641 OVOS2Q6IE36 1432 aa12.32□□□□□ -0.44
CCDC171-208ENST00000486641 LOC102724159A0A0B4J2E5 919 aa12.31□□□□□ -0.44
CCDC171-208ENST00000486641 PTPDC1A2A3K4 754 aa12.31□□□□□ -0.44
CCDC171-208ENST00000486641 PFKFB2O60825 505 aa12.31□□□□□ -0.44
CCDC171-208ENST00000486641 IVLP07476 585 aa12.31□□□□□ -0.44
CCDC171-208ENST00000486641 CHRM1P11229 460 aaPredicted RBP12.31□□□□□ -0.44
CCDC171-208ENST00000486641 TXLNAP40222 546 aa12.31□□□□□ -0.44
CCDC171-208ENST00000486641 MAGEA9P43362 315 aa12.31□□□□□ -0.44
CCDC171-208ENST00000486641 UBASH3AP57075 661 aa12.31□□□□□ -0.44
CCDC171-208ENST00000486641 PWP2Q15269 919 aaKnown RBP12.31□□□□□ -0.44
CCDC171-208ENST00000486641 NOM1Q5C9Z4 860 aaKnown RBP12.31□□□□□ -0.44
CCDC171-208ENST00000486641 SLC26A8Q96RN1 970 aa12.31□□□□□ -0.44
CCDC171-208ENST00000486641 PDE11AQ9HCR9 933 aa12.31□□□□□ -0.44
CCDC171-208ENST00000486641 JRKLQ9Y4A0 524 aa12.31□□□□□ -0.44
CCDC171-208ENST00000486641 KDRP35968 1356 aa12.31□□□□□ -0.44
CCDC171-208ENST00000486641 CEP170BQ9Y4F5 1589 aaPredicted RBP12.31□□□□□ -0.44
CCDC171-208ENST00000486641 SLC3A2P08195 630 aaKnown RBP12.31□□□□□ -0.44
CCDC171-208ENST00000486641 GUCY2CP25092 1073 aa12.31□□□□□ -0.44
CCDC171-208ENST00000486641 COL15A1P39059 1388 aa12.31□□□□□ -0.44
CCDC171-208ENST00000486641 APOBRQ0VD83 1088 aa12.31□□□□□ -0.44
CCDC171-208ENST00000486641 TTC31Q49AM3 519 aaPredicted RBP12.31□□□□□ -0.44
CCDC171-208ENST00000486641 FCHSD1Q86WN1 690 aa12.31□□□□□ -0.44
CCDC171-208ENST00000486641 TMEM139Q8IV31 216 aa12.31□□□□□ -0.44
CCDC171-208ENST00000486641 LRRC37A3O60309 1634 aa12.3□□□□□ -0.44
CCDC171-208ENST00000486641 A0A1W2PQ27 194 aa12.3□□□□□ -0.44
CCDC171-208ENST00000486641 A0A1W2PQ64 194 aa12.3□□□□□ -0.44
CCDC171-208ENST00000486641 A0A1W2PQD8 194 aa12.3□□□□□ -0.44
CCDC171-208ENST00000486641 CCDC151A5D8V7 595 aa12.3□□□□□ -0.44
CCDC171-208ENST00000486641 CCT2P78371 535 aaKnown RBP12.3□□□□□ -0.44
CCDC171-208ENST00000486641 NBPF6Q5VWK0 638 aa12.3□□□□□ -0.44
CCDC171-208ENST00000486641 GOLGA1Q92805 767 aa12.3□□□□□ -0.44
CCDC171-208ENST00000486641 KIFC2Q96AC6 838 aa12.3□□□□□ -0.44
CCDC171-208ENST00000486641 DHX58Q96C10 678 aa12.3□□□□□ -0.44
CCDC171-208ENST00000486641 EDC3Q96F86 508 aaKnown RBP12.3□□□□□ -0.44
CCDC171-208ENST00000486641 NBPF4Q96M43 638 aa12.3□□□□□ -0.44
CCDC171-208ENST00000486641 CHPF2Q9P2E5 772 aa12.3□□□□□ -0.44
CCDC171-208ENST00000486641 EIF3CLB5ME19 914 aaKnown RBP12.29□□□□□ -0.44
CCDC171-208ENST00000486641 TMEM232C9JQI7 657 aa12.29□□□□□ -0.44
CCDC171-208ENST00000486641 N4BP1O75113 896 aaKnown RBP12.29□□□□□ -0.44
CCDC171-208ENST00000486641 SERPINC1P01008 464 aa12.29□□□□□ -0.44
CCDC171-208ENST00000486641 ANXA1P04083 346 aa12.29□□□□□ -0.44
CCDC171-208ENST00000486641 MCM6Q14566 821 aa12.29□□□□□ -0.44
CCDC171-208ENST00000486641 JAKMIP3Q5VZ66 844 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms