RNA–Protein interactions for RNA: ENST00000486417.5

TMC1-204, Transcript of transmembrane channel like 1, humanhuman

TSL 2

Gene TMC1, Length 1,528 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-204ENST00000486417 EPHA10Q5JZY3 1008 aa8.86□□□□□ -0.99
TMC1-204ENST00000486417 POTEBQ6S5H4 581 aa8.86□□□□□ -0.99
TMC1-204ENST00000486417 UBE3BQ7Z3V4 1068 aa8.86□□□□□ -0.99
TMC1-204ENST00000486417 ZBTB3Q9H5J0 574 aa8.86□□□□□ -0.99
TMC1-204ENST00000486417 PCDHGC3Q9UN70 934 aa8.86□□□□□ -0.99
TMC1-204ENST00000486417 PA2G4Q9UQ80 394 aaKnown RBP8.86□□□□□ -0.99
TMC1-204ENST00000486417 MYH3P11055 1940 aa8.86□□□□□ -0.99
TMC1-204ENST00000486417 LAMB2P55268 1798 aa8.86□□□□□ -0.99
TMC1-204ENST00000486417 SBF2Q86WG5 1849 aa8.85□□□□□ -0.99
TMC1-204ENST00000486417 A0A087WZG4 1122 aa8.85□□□□□ -0.99
TMC1-204ENST00000486417 SPDYE5A6NIY4 337 aa8.85□□□□□ -0.99
TMC1-204ENST00000486417 CYP19A1P11511 503 aaPredicted RBP8.85□□□□□ -0.99
TMC1-204ENST00000486417 GCGRP47871 477 aa8.85□□□□□ -0.99
TMC1-204ENST00000486417 OS9Q13438 667 aaPredicted RBP8.85□□□□□ -0.99
TMC1-204ENST00000486417 FAM98CQ17RN3 349 aaKnown RBP8.85□□□□□ -0.99
TMC1-204ENST00000486417 RABL6Q3YEC7 729 aaPredicted RBP8.85□□□□□ -0.99
TMC1-204ENST00000486417 TSHZ3Q63HK5 1081 aa8.85□□□□□ -0.99
TMC1-204ENST00000486417 KIF6Q6ZMV9 814 aa8.85□□□□□ -0.99
TMC1-204ENST00000486417 ERC1Q8IUD2 1116 aa8.85□□□□□ -0.99
TMC1-204ENST00000486417 ACSBG1Q96GR2 724 aa8.85□□□□□ -0.99
TMC1-204ENST00000486417 NGLY1Q96IV0 654 aa8.85□□□□□ -0.99
TMC1-204ENST00000486417 TRAIPQ9BWF2 469 aa8.85□□□□□ -0.99
TMC1-204ENST00000486417 CWC25Q9NXE8 425 aaPredicted RBP8.85□□□□□ -0.99
TMC1-204ENST00000486417 RABGEF1Q9UJ41 708 aa8.85□□□□□ -0.99
TMC1-204ENST00000486417 SCN7AQ01118 1682 aa8.85□□□□□ -0.99
TMC1-204ENST00000486417 KAT6BQ8WYB5 2073 aa8.85□□□□□ -0.99
TMC1-204ENST00000486417 USP42Q9H9J4 1324 aaKnown RBP8.85□□□□□ -0.99
TMC1-204ENST00000486417 LY75O60449 1722 aa8.85□□□□□ -0.99
TMC1-204ENST00000486417 PALLDQ8WX93 1383 aa8.85□□□□□ -0.99
TMC1-204ENST00000486417 H7C1W4 665 aa8.85□□□□□ -0.99
TMC1-204ENST00000486417 HOXA2O43364 376 aa8.85□□□□□ -0.99
TMC1-204ENST00000486417 RBM25P49756 843 aaKnown RBP8.85□□□□□ -0.99
TMC1-204ENST00000486417 CCDC191Q8NCU4 936 aa8.85□□□□□ -0.99
TMC1-204ENST00000486417 JARID2Q92833 1246 aaPredicted RBP8.85□□□□□ -0.99
TMC1-204ENST00000486417 ISCA1Q9BUE6 129 aa8.85□□□□□ -0.99
TMC1-204ENST00000486417 ZBTB1Q9Y2K1 713 aa8.85□□□□□ -0.99
TMC1-204ENST00000486417 MAP3K15Q6ZN16 1313 aa8.84□□□□□ -0.99
TMC1-204ENST00000486417 CASZ1Q86V15 1759 aa8.84□□□□□ -0.99
TMC1-204ENST00000486417 A0A0G2JS52 829 aa8.84□□□□□ -0.99
TMC1-204ENST00000486417 RFX5P48382 616 aaPredicted RBP8.84□□□□□ -0.99
TMC1-204ENST00000486417 TUSC1Q2TAM9 212 aa8.84□□□□□ -0.99
TMC1-204ENST00000486417 LHX8Q68G74 356 aa8.84□□□□□ -0.99
TMC1-204ENST00000486417 CASC1Q6TDU7 716 aa8.84□□□□□ -0.99
TMC1-204ENST00000486417 PI4K2BQ8TCG2 481 aa8.84□□□□□ -0.99
TMC1-204ENST00000486417 ZNF330Q9Y3S2 320 aaPredicted RBP8.84□□□□□ -0.99
TMC1-204ENST00000486417 MYH14Q7Z406 1995 aaKnown RBP8.84□□□□□ -1
TMC1-204ENST00000486417 ATRNO75882 1429 aa8.83□□□□□ -1
TMC1-204ENST00000486417 TTC41PQ6P2S7 1318 aa8.83□□□□□ -1
TMC1-204ENST00000486417 SLC4A3P48751 1232 aa8.83□□□□□ -1
TMC1-204ENST00000486417 G3BP1Q13283 466 aaKnown RBP eCLIP8.83□□□□□ -1
TMC1-204ENST00000486417 TCIRG1Q13488 830 aa8.83□□□□□ -1
TMC1-204ENST00000486417 BECN1Q14457 450 aa8.83□□□□□ -1
TMC1-204ENST00000486417 BANK1Q8NDB2 785 aa8.83□□□□□ -1
TMC1-204ENST00000486417 ANP32EQ9BTT0 268 aa8.83□□□□□ -1
TMC1-204ENST00000486417 USP21Q9UK80 565 aa8.83□□□□□ -1
TMC1-204ENST00000486417 VPS9D1Q9Y2B5 631 aa8.83□□□□□ -1
TMC1-204ENST00000486417 TAF1LQ8IZX4 1826 aa8.83□□□□□ -1
TMC1-204ENST00000486417 DDX60Q8IY21 1712 aaKnown RBP8.82□□□□□ -1
TMC1-204ENST00000486417 LRP5O75197 1615 aa8.82□□□□□ -1
TMC1-204ENST00000486417 FAM205CA6NFA0 338 aa8.82□□□□□ -1
TMC1-204ENST00000486417 AP1G2O75843 785 aa8.82□□□□□ -1
TMC1-204ENST00000486417 SASH1O94885 1247 aa8.82□□□□□ -1
TMC1-204ENST00000486417 HSPA1LP34931 641 aa8.82□□□□□ -1
TMC1-204ENST00000486417 IL6STP40189 918 aaPredicted RBP8.82□□□□□ -1
TMC1-204ENST00000486417 EMP3P54852 163 aa8.82□□□□□ -1
TMC1-204ENST00000486417 FOXO4P98177 505 aa8.82□□□□□ -1
TMC1-204ENST00000486417 PTPN12Q05209 780 aaKnown RBP8.82□□□□□ -1
TMC1-204ENST00000486417 TMEM259Q4ZIN3 620 aa8.82□□□□□ -1
TMC1-204ENST00000486417 SAMD7Q7Z3H4 446 aa8.82□□□□□ -1
TMC1-204ENST00000486417 CLASRPQ8N2M8 674 aaKnown RBP8.82□□□□□ -1
TMC1-204ENST00000486417 KLHDC4Q8TBB5 520 aa8.82□□□□□ -1
TMC1-204ENST00000486417 SIL1Q9H173 461 aa8.82□□□□□ -1
TMC1-204ENST00000486417 GDPD2Q9HCC8 539 aa8.82□□□□□ -1
TMC1-204ENST00000486417 COPRSQ9NQ92 184 aa8.82□□□□□ -1
TMC1-204ENST00000486417 LOC102724428A0A0B4J2F2 783 aa8.81□□□□□ -1
TMC1-204ENST00000486417 SIK1P57059 783 aa8.81□□□□□ -1
TMC1-204ENST00000486417 TRIM28Q13263 835 aaKnown RBP8.81□□□□□ -1
TMC1-204ENST00000486417 HSP90AB3PQ58FF7 597 aa8.81□□□□□ -1
TMC1-204ENST00000486417 MEX3CQ5U5Q3 659 aaKnown RBP8.81□□□□□ -1
TMC1-204ENST00000486417 LMBR1LQ6UX01 489 aa8.81□□□□□ -1
TMC1-204ENST00000486417 AACSQ86V21 672 aa8.81□□□□□ -1
TMC1-204ENST00000486417 SMARCC1Q92922 1105 aaPredicted RBP8.81□□□□□ -1
TMC1-204ENST00000486417 AFF2P51816 1311 aa8.81□□□□□ -1
TMC1-204ENST00000486417 ERC2O15083 957 aa8.8□□□□□ -1
TMC1-204ENST00000486417 KCNQ2O43526 872 aa8.8□□□□□ -1
TMC1-204ENST00000486417 RAD21O60216 631 aa8.8□□□□□ -1
TMC1-204ENST00000486417 PCCAP05165 728 aaPredicted RBP8.8□□□□□ -1
TMC1-204ENST00000486417 IFIT2P09913 472 aaKnown RBP8.8□□□□□ -1
TMC1-204ENST00000486417 ATP6V1AP38606 617 aa8.8□□□□□ -1
TMC1-204ENST00000486417 CRKLP46109 303 aaKnown RBP8.8□□□□□ -1
TMC1-204ENST00000486417 ITPK1Q13572 414 aa8.8□□□□□ -1
TMC1-204ENST00000486417 HLFQ16534 295 aa8.8□□□□□ -1
TMC1-204ENST00000486417 DZIP3Q86Y13 1208 aaKnown RBP8.8□□□□□ -1
TMC1-204ENST00000486417 RILPL2Q969X0 211 aa8.8□□□□□ -1
TMC1-204ENST00000486417 GPATCH3Q96I76 525 aa8.8□□□□□ -1
TMC1-204ENST00000486417 SLC4A5Q9BY07 1137 aa8.8□□□□□ -1
TMC1-204ENST00000486417 CCDC87Q9NVE4 849 aa8.8□□□□□ -1
TMC1-204ENST00000486417 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.8□□□□□ -1
TMC1-204ENST00000486417 CDHR2Q9BYE9 1310 aa8.8□□□□□ -1
TMC1-204ENST00000486417 COL24A1Q17RW2 1714 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms