RNA–Protein interactions for RNA: ENST00000486361.5

LIMK1-206, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 569 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-206ENST00000486361 MROH5Q6ZUA9 1318 aa24.72■■□□□ 1.55
LIMK1-206ENST00000486361 IRS2Q9Y4H2 1338 aa24.72■■□□□ 1.55
LIMK1-206ENST00000486361 FBXW7Q969H0 707 aa24.72■■□□□ 1.55
LIMK1-206ENST00000486361 COA1Q9GZY4 146 aa24.72■■□□□ 1.55
LIMK1-206ENST00000486361 CNOT7Q9UIV1 285 aaKnown RBP24.72■■□□□ 1.55
LIMK1-206ENST00000486361 SCN9AQ15858 1988 aa24.72■■□□□ 1.55
LIMK1-206ENST00000486361 EYA2O00167 538 aa24.71■■□□□ 1.55
LIMK1-206ENST00000486361 VIL1P09327 827 aaKnown RBP24.71■■□□□ 1.55
LIMK1-206ENST00000486361 FSTL1Q12841 308 aa24.71■■□□□ 1.55
LIMK1-206ENST00000486361 MXD3Q9BW11 206 aa24.71■■□□□ 1.55
LIMK1-206ENST00000486361 C1orf115Q9H7X2 142 aa24.71■■□□□ 1.55
LIMK1-206ENST00000486361 ZBTB7BO15156 539 aaPredicted RBP24.7■■□□□ 1.54
LIMK1-206ENST00000486361 CHADLQ6NUI6 762 aa24.7■■□□□ 1.54
LIMK1-206ENST00000486361 PNMA8AQ86V59 439 aaPredicted RBP24.7■■□□□ 1.54
LIMK1-206ENST00000486361 CD209Q9NNX6 404 aa24.7■■□□□ 1.54
LIMK1-206ENST00000486361 USP17L3A6NCW0 530 aa24.69■■□□□ 1.54
LIMK1-206ENST00000486361 USP17L4A6NCW7 530 aa24.69■■□□□ 1.54
LIMK1-206ENST00000486361 SRGAP3O43295 1099 aa24.69■■□□□ 1.54
LIMK1-206ENST00000486361 UBE4AQ14139 1066 aa24.69■■□□□ 1.54
LIMK1-206ENST00000486361 C15orf52Q6ZUT6 534 aaKnown RBP24.69■■□□□ 1.54
LIMK1-206ENST00000486361 USP17L1Q7RTZ2 530 aa24.69■■□□□ 1.54
LIMK1-206ENST00000486361 ATG9AQ7Z3C6 839 aa24.69■■□□□ 1.54
LIMK1-206ENST00000486361 LDHDQ86WU2 507 aa24.69■■□□□ 1.54
LIMK1-206ENST00000486361 MICALL2Q8IY33 904 aa24.69■■□□□ 1.54
LIMK1-206ENST00000486361 A0A1B0GUL6 1792 aa24.69■■□□□ 1.54
LIMK1-206ENST00000486361 HSPA6P17066 643 aa24.68■■□□□ 1.54
LIMK1-206ENST00000486361 GYG1P46976 350 aa24.68■■□□□ 1.54
LIMK1-206ENST00000486361 RSBN1LQ6PCB5 846 aaPredicted RBP24.68■■□□□ 1.54
LIMK1-206ENST00000486361 VGLL2Q8N8G2 317 aa24.68■■□□□ 1.54
LIMK1-206ENST00000486361 DPF2Q92785 391 aa24.68■■□□□ 1.54
LIMK1-206ENST00000486361 ADARB2Q9NS39 739 aaKnown RBP24.68■■□□□ 1.54
LIMK1-206ENST00000486361 PNMA6EA0A0J9YXQ4 647 aa24.67■■□□□ 1.54
LIMK1-206ENST00000486361 H7C1D1 291 aa24.67■■□□□ 1.54
LIMK1-206ENST00000486361 PDE8BO95263 885 aa24.67■■□□□ 1.54
LIMK1-206ENST00000486361 RBM26Q5T8P6 1007 aaKnown RBP24.67■■□□□ 1.54
LIMK1-206ENST00000486361 SAMD7Q7Z3H4 446 aa24.67■■□□□ 1.54
LIMK1-206ENST00000486361 HIRAP54198 1017 aaPredicted RBP24.66■■□□□ 1.54
LIMK1-206ENST00000486361 GTF2IP78347 998 aa24.66■■□□□ 1.54
LIMK1-206ENST00000486361 MTX1Q13505 466 aa24.66■■□□□ 1.54
LIMK1-206ENST00000486361 MAP1SQ66K74 1059 aaPredicted RBP24.66■■□□□ 1.54
LIMK1-206ENST00000486361 USP50Q70EL3 339 aaPredicted RBP24.66■■□□□ 1.54
LIMK1-206ENST00000486361 ZNF804AQ7Z570 1209 aa24.66■■□□□ 1.54
LIMK1-206ENST00000486361 TRPM4Q8TD43 1214 aa24.66■■□□□ 1.54
LIMK1-206ENST00000486361 COPRSQ9NQ92 184 aa24.66■■□□□ 1.54
LIMK1-206ENST00000486361 COG6Q9Y2V7 657 aa24.66■■□□□ 1.54
LIMK1-206ENST00000486361 MS4A1P11836 297 aa24.65■■□□□ 1.54
LIMK1-206ENST00000486361 RPS12P25398 132 aaKnown RBP24.65■■□□□ 1.54
LIMK1-206ENST00000486361 DACT2Q5SW24 774 aa24.65■■□□□ 1.54
LIMK1-206ENST00000486361 C20orf194Q5TEA3 1177 aa24.65■■□□□ 1.54
LIMK1-206ENST00000486361 TTLL5Q6EMB2 1281 aa24.65■■□□□ 1.54
LIMK1-206ENST00000486361 FAM84BQ96KN1 310 aaPredicted RBP24.65■■□□□ 1.54
LIMK1-206ENST00000486361 JAG2Q9Y219 1238 aa24.65■■□□□ 1.54
LIMK1-206ENST00000486361 EGFRP00533 1210 aa24.64■■□□□ 1.54
LIMK1-206ENST00000486361 TBC1D10BQ4KMP7 808 aaPredicted RBP24.64■■□□□ 1.54
LIMK1-206ENST00000486361 CIAO1O76071 339 aa24.63■■□□□ 1.53
LIMK1-206ENST00000486361 HIBADHP31937 336 aaKnown RBP24.63■■□□□ 1.53
LIMK1-206ENST00000486361 STRIP1Q5VSL9 837 aa24.63■■□□□ 1.53
LIMK1-206ENST00000486361 AGBL3Q8NEM8 1001 aa24.63■■□□□ 1.53
LIMK1-206ENST00000486361 GMLQ99445 158 aa24.63■■□□□ 1.53
LIMK1-206ENST00000486361 IL1R1P14778 569 aa24.62■■□□□ 1.53
LIMK1-206ENST00000486361 FGFR2P21802 821 aa24.62■■□□□ 1.53
LIMK1-206ENST00000486361 HTRA3P83110 453 aa24.62■■□□□ 1.53
LIMK1-206ENST00000486361 ATP8B2P98198 1209 aa24.62■■□□□ 1.53
LIMK1-206ENST00000486361 CNTROBQ8N137 903 aa24.62■■□□□ 1.53
LIMK1-206ENST00000486361 CEP126Q9P2H0 1117 aa24.62■■□□□ 1.53
LIMK1-206ENST00000486361 FBXO3Q9UK99 471 aa24.62■■□□□ 1.53
LIMK1-206ENST00000486361 IL15P40933 162 aaPredicted RBP24.61■■□□□ 1.53
LIMK1-206ENST00000486361 MVPQ14764 893 aaKnown RBP24.61■■□□□ 1.53
LIMK1-206ENST00000486361 PUM3Q15397 648 aaKnown RBP24.61■■□□□ 1.53
LIMK1-206ENST00000486361 IQSEC3Q9UPP2 1182 aaPredicted RBP24.61■■□□□ 1.53
LIMK1-206ENST00000486361 ADAMTSL1Q8N6G6 1762 aa24.6■■□□□ 1.53
LIMK1-206ENST00000486361 ITGBL1O95965 494 aaPredicted RBP24.6■■□□□ 1.53
LIMK1-206ENST00000486361 USP17L8P0C7I0 530 aa24.6■■□□□ 1.53
LIMK1-206ENST00000486361 BCAMP50895 628 aa24.6■■□□□ 1.53
LIMK1-206ENST00000486361 FBXO33Q7Z6M2 555 aa24.6■■□□□ 1.53
LIMK1-206ENST00000486361 FMR1Q06787 632 aaKnown RBP eCLIP24.59■■□□□ 1.53
LIMK1-206ENST00000486361 VPS37DQ86XT2 251 aa24.59■■□□□ 1.53
LIMK1-206ENST00000486361 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.59■■□□□ 1.53
LIMK1-206ENST00000486361 TDRD7Q8NHU6 1098 aaKnown RBP24.59■■□□□ 1.53
LIMK1-206ENST00000486361 IFIT1P09914 478 aaKnown RBP24.58■■□□□ 1.53
LIMK1-206ENST00000486361 TFCP2Q12800 502 aa24.58■■□□□ 1.53
LIMK1-206ENST00000486361 POLA2Q14181 598 aa24.58■■□□□ 1.53
LIMK1-206ENST00000486361 CAVIN4Q5BKX8 364 aa24.58■■□□□ 1.53
LIMK1-206ENST00000486361 CERS5Q8N5B7 392 aa24.58■■□□□ 1.53
LIMK1-206ENST00000486361 LPIN2Q92539 896 aa24.58■■□□□ 1.53
LIMK1-206ENST00000486361 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.58■■□□□ 1.53
LIMK1-206ENST00000486361 PSME4Q14997 1843 aa24.57■■□□□ 1.52
LIMK1-206ENST00000486361 SLC5A1P13866 664 aa24.57■■□□□ 1.52
LIMK1-206ENST00000486361 APLP1P51693 650 aa24.57■■□□□ 1.52
LIMK1-206ENST00000486361 ZNF280AP59817 542 aaPredicted RBP24.57■■□□□ 1.52
LIMK1-206ENST00000486361 ATP2B3Q16720 1220 aa24.57■■□□□ 1.52
LIMK1-206ENST00000486361 KIF4BQ2VIQ3 1234 aa24.57■■□□□ 1.52
LIMK1-206ENST00000486361 KIAA0825Q8IV33 1275 aa24.57■■□□□ 1.52
LIMK1-206ENST00000486361 DDX19BQ9UMR2 479 aa24.57■■□□□ 1.52
LIMK1-206ENST00000486361 SASH1O94885 1247 aa24.56■■□□□ 1.52
LIMK1-206ENST00000486361 G3BP1Q13283 466 aaKnown RBP eCLIP24.56■■□□□ 1.52
LIMK1-206ENST00000486361 SSH3Q8TE77 659 aa24.56■■□□□ 1.52
LIMK1-206ENST00000486361 ASTN2O75129 1339 aaPredicted RBP24.56■■□□□ 1.52
LIMK1-206ENST00000486361 PASKQ96RG2 1323 aa24.56■■□□□ 1.52
LIMK1-206ENST00000486361 F8W031 263 aaPredicted RBP24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms