RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 PGAP2Q9UHJ9 254 aa20.96■□□□□ 0.95
CCHCR1-214ENST00000486060 RPS12P25398 132 aaKnown RBP20.95■□□□□ 0.94
CCHCR1-214ENST00000486060 RSBN1LQ6PCB5 846 aaPredicted RBP20.95■□□□□ 0.94
CCHCR1-214ENST00000486060 ARHGAP45Q92619 1136 aa20.95■□□□□ 0.94
CCHCR1-214ENST00000486060 KLRG1Q96E93 195 aa20.95■□□□□ 0.94
CCHCR1-214ENST00000486060 MXD3Q9BW11 206 aa20.95■□□□□ 0.94
CCHCR1-214ENST00000486060 KIF16BQ96L93 1317 aa20.95■□□□□ 0.94
CCHCR1-214ENST00000486060 H7C1D1 291 aa20.94■□□□□ 0.94
CCHCR1-214ENST00000486060 TAF7LQ5H9L4 462 aa20.94■□□□□ 0.94
CCHCR1-214ENST00000486060 KLHDC4Q8TBB5 520 aa20.94■□□□□ 0.94
CCHCR1-214ENST00000486060 COA1Q9GZY4 146 aa20.94■□□□□ 0.94
CCHCR1-214ENST00000486060 CNNM1Q9NRU3 951 aa20.94■□□□□ 0.94
CCHCR1-214ENST00000486060 RIPOR2Q9Y4F9 1068 aa20.94■□□□□ 0.94
CCHCR1-214ENST00000486060 USP17L3A6NCW0 530 aa20.93■□□□□ 0.94
CCHCR1-214ENST00000486060 USP17L4A6NCW7 530 aa20.93■□□□□ 0.94
CCHCR1-214ENST00000486060 TRAF5O00463 557 aa20.93■□□□□ 0.94
CCHCR1-214ENST00000486060 TRIM27P14373 513 aa20.93■□□□□ 0.94
CCHCR1-214ENST00000486060 RFX5P48382 616 aaPredicted RBP20.93■□□□□ 0.94
CCHCR1-214ENST00000486060 TBC1D10BQ4KMP7 808 aaPredicted RBP20.93■□□□□ 0.94
CCHCR1-214ENST00000486060 LRRC24Q50LG9 513 aa20.93■□□□□ 0.94
CCHCR1-214ENST00000486060 DACT2Q5SW24 774 aa20.93■□□□□ 0.94
CCHCR1-214ENST00000486060 INTS3Q68E01 1043 aaKnown RBP20.93■□□□□ 0.94
CCHCR1-214ENST00000486060 C15orf52Q6ZUT6 534 aaKnown RBP20.93■□□□□ 0.94
CCHCR1-214ENST00000486060 USP17L1Q7RTZ2 530 aa20.93■□□□□ 0.94
CCHCR1-214ENST00000486060 CREBZFQ9NS37 354 aa20.93■□□□□ 0.94
CCHCR1-214ENST00000486060 PLIN1O60240 522 aa20.92■□□□□ 0.94
CCHCR1-214ENST00000486060 MEIS3Q99687 375 aa20.92■□□□□ 0.94
CCHCR1-214ENST00000486060 MYH13Q9UKX3 1938 aa20.92■□□□□ 0.94
CCHCR1-214ENST00000486060 ASTN2O75129 1339 aaPredicted RBP20.91■□□□□ 0.94
CCHCR1-214ENST00000486060 KCNJ4P48050 445 aa20.91■□□□□ 0.94
CCHCR1-214ENST00000486060 AGBL3Q8NEM8 1001 aa20.91■□□□□ 0.94
CCHCR1-214ENST00000486060 ARAP2Q8WZ64 1704 aa20.91■□□□□ 0.94
CCHCR1-214ENST00000486060 GLIS2Q9BZE0 524 aaPredicted RBP20.91■□□□□ 0.94
CCHCR1-214ENST00000486060 CD209Q9NNX6 404 aa20.91■□□□□ 0.94
CCHCR1-214ENST00000486060 ECM29Q5VYK3 1845 aa20.9■□□□□ 0.94
CCHCR1-214ENST00000486060 ZNF280AP59817 542 aaPredicted RBP20.9■□□□□ 0.94
CCHCR1-214ENST00000486060 RBM26Q5T8P6 1007 aaKnown RBP20.9■□□□□ 0.94
CCHCR1-214ENST00000486060 DLK2Q6UY11 383 aa20.9■□□□□ 0.94
CCHCR1-214ENST00000486060 ATF7IPQ6VMQ6 1270 aa20.9■□□□□ 0.94
CCHCR1-214ENST00000486060 TMEM88BA6NKF7 163 aa20.89■□□□□ 0.93
CCHCR1-214ENST00000486060 UBTFL1P0CB47 393 aaPredicted RBP20.89■□□□□ 0.93
CCHCR1-214ENST00000486060 STRIP1Q5VSL9 837 aa20.89■□□□□ 0.93
CCHCR1-214ENST00000486060 CST9Q5W186 159 aa20.89■□□□□ 0.93
CCHCR1-214ENST00000486060 VGLL2Q8N8G2 317 aa20.89■□□□□ 0.93
CCHCR1-214ENST00000486060 JMYQ8N9B5 988 aa20.89■□□□□ 0.93
CCHCR1-214ENST00000486060 ZC3H15Q8WU90 426 aaKnown RBP20.89■□□□□ 0.93
CCHCR1-214ENST00000486060 FRAT1Q92837 279 aaPredicted RBP20.89■□□□□ 0.93
CCHCR1-214ENST00000486060 LRRFIP2Q9Y608 721 aaKnown RBP20.89■□□□□ 0.93
CCHCR1-214ENST00000486060 PTPN12Q05209 780 aaKnown RBP20.88■□□□□ 0.93
CCHCR1-214ENST00000486060 KIF4BQ2VIQ3 1234 aa20.88■□□□□ 0.93
CCHCR1-214ENST00000486060 CLUAP1Q96AJ1 413 aa20.88■□□□□ 0.93
CCHCR1-214ENST00000486060 GTF2IP78347 998 aa20.87■□□□□ 0.93
CCHCR1-214ENST00000486060 TTLL5Q6EMB2 1281 aa20.87■□□□□ 0.93
CCHCR1-214ENST00000486060 MKRN1Q9UHC7 482 aaKnown RBP20.87■□□□□ 0.93
CCHCR1-214ENST00000486060 CNTNAP1P78357 1384 aa20.86■□□□□ 0.93
CCHCR1-214ENST00000486060 MROH5Q6ZUA9 1318 aa20.86■□□□□ 0.93
CCHCR1-214ENST00000486060 USP17L8P0C7I0 530 aa20.86■□□□□ 0.93
CCHCR1-214ENST00000486060 IL1R1P14778 569 aa20.86■□□□□ 0.93
CCHCR1-214ENST00000486060 UBE4AQ14139 1066 aa20.86■□□□□ 0.93
CCHCR1-214ENST00000486060 CERS5Q8N5B7 392 aa20.86■□□□□ 0.93
CCHCR1-214ENST00000486060 FBXW7Q969H0 707 aa20.86■□□□□ 0.93
CCHCR1-214ENST00000486060 IPO8O15397 1037 aaKnown RBP20.85■□□□□ 0.93
CCHCR1-214ENST00000486060 GYG1P46976 350 aa20.85■□□□□ 0.93
CCHCR1-214ENST00000486060 ATG9AQ7Z3C6 839 aa20.85■□□□□ 0.93
CCHCR1-214ENST00000486060 USP48Q86UV5 1035 aa20.84■□□□□ 0.93
CCHCR1-214ENST00000486060 TMEM57Q8N5G2 664 aa20.84■□□□□ 0.93
CCHCR1-214ENST00000486060 FAM84BQ96KN1 310 aaPredicted RBP20.84■□□□□ 0.93
CCHCR1-214ENST00000486060 MYOZ2Q9NPC6 264 aa20.84■□□□□ 0.93
CCHCR1-214ENST00000486060 ADM5C9JUS6 153 aa20.83■□□□□ 0.93
CCHCR1-214ENST00000486060 EYA2O00167 538 aa20.83■□□□□ 0.93
CCHCR1-214ENST00000486060 PDE8BO95263 885 aa20.83■□□□□ 0.93
CCHCR1-214ENST00000486060 METTL24Q5JXM2 366 aa20.83■□□□□ 0.93
CCHCR1-214ENST00000486060 ZKSCAN2Q63HK3 967 aa20.83■□□□□ 0.93
CCHCR1-214ENST00000486060 CDC37L1Q7L3B6 337 aa20.83■□□□□ 0.93
CCHCR1-214ENST00000486060 ZNF804AQ7Z570 1209 aa20.83■□□□□ 0.93
CCHCR1-214ENST00000486060 GGA3Q9NZ52 723 aa20.83■□□□□ 0.93
CCHCR1-214ENST00000486060 PA2G4Q9UQ80 394 aaKnown RBP20.83■□□□□ 0.93
CCHCR1-214ENST00000486060 JAG2Q9Y219 1238 aa20.83■□□□□ 0.93
CCHCR1-214ENST00000486060 MYO3BQ8WXR4 1341 aa20.82■□□□□ 0.92
CCHCR1-214ENST00000486060 RLBP1P12271 317 aa20.82■□□□□ 0.92
CCHCR1-214ENST00000486060 FGFR2P21802 821 aa20.82■□□□□ 0.92
CCHCR1-214ENST00000486060 SCARF1Q14162 830 aa20.82■□□□□ 0.92
CCHCR1-214ENST00000486060 KIAA0825Q8IV33 1275 aa20.82■□□□□ 0.92
CCHCR1-214ENST00000486060 TDRD7Q8NHU6 1098 aaKnown RBP20.82■□□□□ 0.92
CCHCR1-214ENST00000486060 THSD7BQ9C0I4 1608 aa20.82■□□□□ 0.92
CCHCR1-214ENST00000486060 RASSF10A6NK89 507 aa20.81■□□□□ 0.92
CCHCR1-214ENST00000486060 NBPF9Q3BBW0 867 aa20.81■□□□□ 0.92
CCHCR1-214ENST00000486060 FBXO33Q7Z6M2 555 aa20.81■□□□□ 0.92
CCHCR1-214ENST00000486060 SIL1Q9H173 461 aa20.81■□□□□ 0.92
CCHCR1-214ENST00000486060 CELF2O95319 508 aaKnown RBP20.8■□□□□ 0.92
CCHCR1-214ENST00000486060 GNAI3P08754 354 aa20.8■□□□□ 0.92
CCHCR1-214ENST00000486060 HIBADHP31937 336 aaKnown RBP20.8■□□□□ 0.92
CCHCR1-214ENST00000486060 VEGFBP49765 207 aa20.8■□□□□ 0.92
CCHCR1-214ENST00000486060 ANGEL2Q5VTE6 544 aaKnown RBP20.8■□□□□ 0.92
CCHCR1-214ENST00000486060 KRT26Q7Z3Y9 468 aa20.8■□□□□ 0.92
CCHCR1-214ENST00000486060 SCAF8Q9UPN6 1271 aaKnown RBP20.8■□□□□ 0.92
CCHCR1-214ENST00000486060 FAM205AQ6ZU69 1335 aa20.79■□□□□ 0.92
CCHCR1-214ENST00000486060 MTX1Q13505 466 aa20.79■□□□□ 0.92
CCHCR1-214ENST00000486060 ZBED3Q96IU2 234 aaPredicted RBP20.79■□□□□ 0.92
CCHCR1-214ENST00000486060 PCDHAC2Q9Y5I4 1007 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms