RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 LMBR1Q8WVP7 490 aa12□□□□□ -0.49
SRGAP3-207ENST00000485983 GTPBP4Q9BZE4 634 aaKnown RBP12□□□□□ -0.49
SRGAP3-207ENST00000485983 C14orf93Q9H972 538 aaKnown RBP12□□□□□ -0.49
SRGAP3-207ENST00000485983 WDR7Q9Y4E6 1490 aa12□□□□□ -0.49
SRGAP3-207ENST00000485983 LPXNO60711 386 aa12□□□□□ -0.49
SRGAP3-207ENST00000485983 PPFIA3O75145 1194 aa12□□□□□ -0.49
SRGAP3-207ENST00000485983 SLC8A3P57103 927 aa12□□□□□ -0.49
SRGAP3-207ENST00000485983 SP4Q02446 784 aa12□□□□□ -0.49
SRGAP3-207ENST00000485983 NAP1L4Q99733 375 aaKnown RBP12□□□□□ -0.49
SRGAP3-207ENST00000485983 ZBTB21Q9ULJ3 1066 aa12□□□□□ -0.49
SRGAP3-207ENST00000485983 ZNF165P49910 485 aa12□□□□□ -0.49
SRGAP3-207ENST00000485983 SPATA24Q86W54 205 aa12□□□□□ -0.49
SRGAP3-207ENST00000485983 CTR9Q6PD62 1173 aa12□□□□□ -0.49
SRGAP3-207ENST00000485983 GSTA5Q7RTV2 222 aa12□□□□□ -0.49
SRGAP3-207ENST00000485983 ZSCAN30Q86W11 494 aa12□□□□□ -0.49
SRGAP3-207ENST00000485983 FAM83GA6ND36 823 aa12□□□□□ -0.49
SRGAP3-207ENST00000485983 GNPATO15228 680 aa12□□□□□ -0.49
SRGAP3-207ENST00000485983 GJC1P36383 396 aa12□□□□□ -0.49
SRGAP3-207ENST00000485983 C19orf44Q9H6X5 657 aa12□□□□□ -0.49
SRGAP3-207ENST00000485983 PODXL2Q9NZ53 605 aa12□□□□□ -0.49
SRGAP3-207ENST00000485983 NCOA1Q15788 1441 aa11.99□□□□□ -0.49
SRGAP3-207ENST00000485983 TRIM75PA6NK02 468 aa11.99□□□□□ -0.49
SRGAP3-207ENST00000485983 ZMYND15Q9H091 742 aa11.99□□□□□ -0.49
SRGAP3-207ENST00000485983 TXNDC16Q9P2K2 825 aa11.99□□□□□ -0.49
SRGAP3-207ENST00000485983 LMTK3Q96Q04 1460 aa11.99□□□□□ -0.49
SRGAP3-207ENST00000485983 CCDC14Q49A88 953 aa11.99□□□□□ -0.49
SRGAP3-207ENST00000485983 SH3BP5O60239 455 aa11.99□□□□□ -0.49
SRGAP3-207ENST00000485983 CNBD1Q8NA66 436 aa11.99□□□□□ -0.49
SRGAP3-207ENST00000485983 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.99□□□□□ -0.49
SRGAP3-207ENST00000485983 CDCA7Q9BWT1 371 aaPredicted RBP11.99□□□□□ -0.49
SRGAP3-207ENST00000485983 NOS1P29475 1434 aa11.99□□□□□ -0.49
SRGAP3-207ENST00000485983 ZBTB24O43167 697 aaPredicted RBP11.99□□□□□ -0.49
SRGAP3-207ENST00000485983 FBF1Q8TES7 1133 aa11.99□□□□□ -0.49
SRGAP3-207ENST00000485983 BRPF3Q9ULD4 1205 aa11.99□□□□□ -0.49
SRGAP3-207ENST00000485983 IL16Q14005 1332 aa11.99□□□□□ -0.49
SRGAP3-207ENST00000485983 ERICH4A6NGS2 130 aa11.98□□□□□ -0.49
SRGAP3-207ENST00000485983 GAS8O95995 478 aa11.98□□□□□ -0.49
SRGAP3-207ENST00000485983 BIRC2Q13490 618 aa11.98□□□□□ -0.49
SRGAP3-207ENST00000485983 ODF2LQ9ULJ1 636 aa11.98□□□□□ -0.49
SRGAP3-207ENST00000485983 PDE6BP35913 854 aa11.98□□□□□ -0.49
SRGAP3-207ENST00000485983 FAM107BQ9H098 131 aa11.98□□□□□ -0.49
SRGAP3-207ENST00000485983 FAM169AQ9Y6X4 670 aa11.98□□□□□ -0.49
SRGAP3-207ENST00000485983 AKNAD1Q5T1N1 836 aa11.97□□□□□ -0.49
SRGAP3-207ENST00000485983 CCDC63Q8NA47 563 aa11.97□□□□□ -0.49
SRGAP3-207ENST00000485983 ANKRD36BQ8N2N9 1353 aa11.97□□□□□ -0.49
SRGAP3-207ENST00000485983 ARHGEF10LQ9HCE6 1279 aa11.97□□□□□ -0.49
SRGAP3-207ENST00000485983 PAG1Q9NWQ8 432 aa11.97□□□□□ -0.49
SRGAP3-207ENST00000485983 USP25Q9UHP3 1055 aa11.97□□□□□ -0.49
SRGAP3-207ENST00000485983 CCDC50Q8IVM0 306 aa11.97□□□□□ -0.49
SRGAP3-207ENST00000485983 CABLES1Q8TDN4 633 aa11.97□□□□□ -0.49
SRGAP3-207ENST00000485983 GRIN2AQ12879 1464 aa11.97□□□□□ -0.49
SRGAP3-207ENST00000485983 UBASH3AP57075 661 aa11.97□□□□□ -0.49
SRGAP3-207ENST00000485983 UBE2HP62256 183 aa11.97□□□□□ -0.49
SRGAP3-207ENST00000485983 RAB3GAP1Q15042 981 aa11.97□□□□□ -0.49
SRGAP3-207ENST00000485983 BMP2KLQ5H9B9 411 aa11.97□□□□□ -0.49
SRGAP3-207ENST00000485983 SERPINA10Q9UK55 444 aa11.97□□□□□ -0.49
SRGAP3-207ENST00000485983 IQGAP2Q13576 1575 aa11.97□□□□□ -0.49
SRGAP3-207ENST00000485983 ABCC5O15440 1437 aa11.97□□□□□ -0.49
SRGAP3-207ENST00000485983 HSF2BPO75031 334 aa11.97□□□□□ -0.49
SRGAP3-207ENST00000485983 GNG11P61952 73 aa11.97□□□□□ -0.49
SRGAP3-207ENST00000485983 TTC22Q5TAA0 569 aa11.97□□□□□ -0.49
SRGAP3-207ENST00000485983 SKAP1Q86WV1 359 aa11.97□□□□□ -0.49
SRGAP3-207ENST00000485983 DHX29Q7Z478 1369 aaKnown RBP11.96□□□□□ -0.49
SRGAP3-207ENST00000485983 BICDL2A1A5D9 508 aa11.96□□□□□ -0.49
SRGAP3-207ENST00000485983 SSFA2P28290 1259 aa11.96□□□□□ -0.49
SRGAP3-207ENST00000485983 MXRA7P84157 204 aa11.96□□□□□ -0.49
SRGAP3-207ENST00000485983 TCIRG1Q13488 830 aa11.96□□□□□ -0.49
SRGAP3-207ENST00000485983 SNW1Q13573 536 aaKnown RBP11.96□□□□□ -0.49
SRGAP3-207ENST00000485983 MAGEB6Q8N7X4 407 aa11.96□□□□□ -0.49
SRGAP3-207ENST00000485983 CCNL1Q9UK58 526 aaPredicted RBP11.96□□□□□ -0.49
SRGAP3-207ENST00000485983 DENND2AQ9ULE3 1009 aa11.96□□□□□ -0.49
SRGAP3-207ENST00000485983 TBC1D9Q6ZT07 1266 aa11.96□□□□□ -0.49
SRGAP3-207ENST00000485983 DCAF5Q96JK2 942 aa11.96□□□□□ -0.49
SRGAP3-207ENST00000485983 DKC1O60832 514 aaKnown RBP eCLIP11.96□□□□□ -0.49
SRGAP3-207ENST00000485983 TACC1O75410 805 aa11.96□□□□□ -0.49
SRGAP3-207ENST00000485983 PARP1P09874 1014 aaKnown RBP11.96□□□□□ -0.49
SRGAP3-207ENST00000485983 KRT2P35908 639 aa11.96□□□□□ -0.49
SRGAP3-207ENST00000485983 FMNL3Q8IVF7 1028 aa11.96□□□□□ -0.49
SRGAP3-207ENST00000485983 MIGA1Q8NAN2 632 aa11.96□□□□□ -0.49
SRGAP3-207ENST00000485983 NFATC2IPQ8NCF5 419 aa11.96□□□□□ -0.49
SRGAP3-207ENST00000485983 HELBQ8NG08 1087 aaPredicted RBP11.96□□□□□ -0.49
SRGAP3-207ENST00000485983 LINS1Q8NG48 757 aa11.96□□□□□ -0.49
SRGAP3-207ENST00000485983 GOLGA1Q92805 767 aa11.96□□□□□ -0.49
SRGAP3-207ENST00000485983 FNBP1Q96RU3 617 aa11.96□□□□□ -0.49
SRGAP3-207ENST00000485983 LRRC2Q9BYS8 371 aa11.96□□□□□ -0.49
SRGAP3-207ENST00000485983 GDPD2Q9HCC8 539 aa11.96□□□□□ -0.49
SRGAP3-207ENST00000485983 MAST3O60307 1309 aa11.96□□□□□ -0.5
SRGAP3-207ENST00000485983 RPL13P26373 211 aaKnown RBP11.96□□□□□ -0.5
SRGAP3-207ENST00000485983 TSHZ3Q63HK5 1081 aa11.96□□□□□ -0.5
SRGAP3-207ENST00000485983 TEX11Q8IYF3 940 aa11.96□□□□□ -0.5
SRGAP3-207ENST00000485983 RBM8AQ9Y5S9 174 aaKnown RBP11.96□□□□□ -0.5
SRGAP3-207ENST00000485983 SBNO2Q9Y2G9 1366 aa11.96□□□□□ -0.5
SRGAP3-207ENST00000485983 NOP56O00567 594 aaKnown RBP11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 ATP2A2P16615 1042 aaKnown RBP11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 MAP7D1Q3KQU3 841 aa11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 SUPT20HQ8NEM7 779 aa11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 H0YIN7 160 aa11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 UFL1O94874 794 aa11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 LARGE2Q8N3Y3 721 aa11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 PAIP2Q9BPZ3 127 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms