RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 LRRFIP2Q9Y608 721 aaKnown RBP15.64■□□□□ 0.09
PTCD1-205ENST00000485746 MYH3P11055 1940 aa15.64■□□□□ 0.09
PTCD1-205ENST00000485746 MROH5Q6ZUA9 1318 aa15.64■□□□□ 0.09
PTCD1-205ENST00000485746 LRRC24Q50LG9 513 aa15.63■□□□□ 0.09
PTCD1-205ENST00000485746 RSBN1LQ6PCB5 846 aaPredicted RBP15.63■□□□□ 0.09
PTCD1-205ENST00000485746 TXNRD3Q86VQ6 643 aa15.63■□□□□ 0.09
PTCD1-205ENST00000485746 KLRK1P26718 216 aa15.62■□□□□ 0.09
PTCD1-205ENST00000485746 HTRA3P83110 453 aa15.62■□□□□ 0.09
PTCD1-205ENST00000485746 UBE4AQ14139 1066 aa15.62■□□□□ 0.09
PTCD1-205ENST00000485746 TBC1D10BQ4KMP7 808 aaPredicted RBP15.62■□□□□ 0.09
PTCD1-205ENST00000485746 TTLL5Q6EMB2 1281 aa15.62■□□□□ 0.09
PTCD1-205ENST00000485746 AGBL3Q8NEM8 1001 aa15.62■□□□□ 0.09
PTCD1-205ENST00000485746 KLHDC4Q8TBB5 520 aa15.62■□□□□ 0.09
PTCD1-205ENST00000485746 RIPOR2Q9Y4F9 1068 aa15.62■□□□□ 0.09
PTCD1-205ENST00000485746 SHTN1A0MZ66 631 aa15.61■□□□□ 0.09
PTCD1-205ENST00000485746 SAMD7Q7Z3H4 446 aa15.61■□□□□ 0.09
PTCD1-205ENST00000485746 VPS37DQ86XT2 251 aa15.61■□□□□ 0.09
PTCD1-205ENST00000485746 DZIP1LQ8IYY4 767 aaKnown RBP15.61■□□□□ 0.09
PTCD1-205ENST00000485746 TMEM57Q8N5G2 664 aa15.61■□□□□ 0.09
PTCD1-205ENST00000485746 CD209Q9NNX6 404 aa15.61■□□□□ 0.09
PTCD1-205ENST00000485746 SCN4AP35499 1836 aa15.61■□□□□ 0.09
PTCD1-205ENST00000485746 GNAI2P04899 355 aa15.6■□□□□ 0.09
PTCD1-205ENST00000485746 GTF2IP78347 998 aa15.6■□□□□ 0.09
PTCD1-205ENST00000485746 STRIP1Q5VSL9 837 aa15.6■□□□□ 0.09
PTCD1-205ENST00000485746 ITPRIPQ8IWB1 547 aa15.6■□□□□ 0.09
PTCD1-205ENST00000485746 TRPM4Q8TD43 1214 aa15.6■□□□□ 0.09
PTCD1-205ENST00000485746 SIL1Q9H173 461 aa15.6■□□□□ 0.09
PTCD1-205ENST00000485746 FRAT2O75474 233 aaPredicted RBP15.59■□□□□ 0.09
PTCD1-205ENST00000485746 USP17L8P0C7I0 530 aa15.59■□□□□ 0.09
PTCD1-205ENST00000485746 MS4A1P11836 297 aa15.59■□□□□ 0.09
PTCD1-205ENST00000485746 KIF4BQ2VIQ3 1234 aa15.59■□□□□ 0.09
PTCD1-205ENST00000485746 C15orf52Q6ZUT6 534 aaKnown RBP15.59■□□□□ 0.09
PTCD1-205ENST00000485746 OGFOD1Q8N543 542 aa15.59■□□□□ 0.09
PTCD1-205ENST00000485746 SPEF2Q9C093 1822 aa15.59■□□□□ 0.09
PTCD1-205ENST00000485746 LTBP1Q14766 1721 aa15.58■□□□□ 0.08
PTCD1-205ENST00000485746 EYA2O00167 538 aa15.58■□□□□ 0.08
PTCD1-205ENST00000485746 ITGBL1O95965 494 aaPredicted RBP15.58■□□□□ 0.08
PTCD1-205ENST00000485746 IFIT1P09914 478 aaKnown RBP15.58■□□□□ 0.08
PTCD1-205ENST00000485746 HIBADHP31937 336 aaKnown RBP15.58■□□□□ 0.08
PTCD1-205ENST00000485746 HIRAP54198 1017 aaPredicted RBP15.58■□□□□ 0.08
PTCD1-205ENST00000485746 PTPN12Q05209 780 aaKnown RBP15.58■□□□□ 0.08
PTCD1-205ENST00000485746 CAVIN4Q5BKX8 364 aa15.58■□□□□ 0.08
PTCD1-205ENST00000485746 ZC3H15Q8WU90 426 aaKnown RBP15.58■□□□□ 0.08
PTCD1-205ENST00000485746 DCPSQ96C86 337 aaKnown RBP15.58■□□□□ 0.08
PTCD1-205ENST00000485746 MXD3Q9BW11 206 aa15.58■□□□□ 0.08
PTCD1-205ENST00000485746 RCAN3Q9UKA8 241 aa15.58■□□□□ 0.08
PTCD1-205ENST00000485746 HDAC9Q9UKV0 1011 aa15.58■□□□□ 0.08
PTCD1-205ENST00000485746 MYO3BQ8WXR4 1341 aa15.58■□□□□ 0.08
PTCD1-205ENST00000485746 TMEM88BA6NKF7 163 aa15.57■□□□□ 0.08
PTCD1-205ENST00000485746 SRGAP3O43295 1099 aa15.57■□□□□ 0.08
PTCD1-205ENST00000485746 PDE8BO95263 885 aa15.57■□□□□ 0.08
PTCD1-205ENST00000485746 GYG1P46976 350 aa15.57■□□□□ 0.08
PTCD1-205ENST00000485746 RFX5P48382 616 aaPredicted RBP15.57■□□□□ 0.08
PTCD1-205ENST00000485746 DACT2Q5SW24 774 aa15.57■□□□□ 0.08
PTCD1-205ENST00000485746 YTHDC1Q96MU7 727 aaKnown RBP15.57■□□□□ 0.08
PTCD1-205ENST00000485746 CEP126Q9P2H0 1117 aa15.57■□□□□ 0.08
PTCD1-205ENST00000485746 SLC5A1P13866 664 aa15.56■□□□□ 0.08
PTCD1-205ENST00000485746 IL1R1P14778 569 aa15.56■□□□□ 0.08
PTCD1-205ENST00000485746 PUM3Q15397 648 aaKnown RBP15.56■□□□□ 0.08
PTCD1-205ENST00000485746 CDC37L1Q7L3B6 337 aa15.56■□□□□ 0.08
PTCD1-205ENST00000485746 MYOZ2Q9NPC6 264 aa15.56■□□□□ 0.08
PTCD1-205ENST00000485746 CREBZFQ9NS37 354 aa15.56■□□□□ 0.08
PTCD1-205ENST00000485746 FBXO3Q9UK99 471 aa15.56■□□□□ 0.08
PTCD1-205ENST00000485746 PA2G4Q9UQ80 394 aaKnown RBP15.56■□□□□ 0.08
PTCD1-205ENST00000485746 JAG2Q9Y219 1238 aa15.56■□□□□ 0.08
PTCD1-205ENST00000485746 PASKQ96RG2 1323 aa15.56■□□□□ 0.08
PTCD1-205ENST00000485746 CIAO1O76071 339 aa15.55■□□□□ 0.08
PTCD1-205ENST00000485746 IL15P40933 162 aaPredicted RBP15.55■□□□□ 0.08
PTCD1-205ENST00000485746 ZNF280AP59817 542 aaPredicted RBP15.55■□□□□ 0.08
PTCD1-205ENST00000485746 SCARF1Q14162 830 aa15.55■□□□□ 0.08
PTCD1-205ENST00000485746 USP48Q86UV5 1035 aa15.55■□□□□ 0.08
PTCD1-205ENST00000485746 KIAA0825Q8IV33 1275 aa15.55■□□□□ 0.08
PTCD1-205ENST00000485746 FAM84BQ96KN1 310 aaPredicted RBP15.55■□□□□ 0.08
PTCD1-205ENST00000485746 GMLQ99445 158 aa15.55■□□□□ 0.08
PTCD1-205ENST00000485746 GLIS2Q9BZE0 524 aaPredicted RBP15.55■□□□□ 0.08
PTCD1-205ENST00000485746 ZNF408Q9H9D4 720 aa15.55■□□□□ 0.08
PTCD1-205ENST00000485746 F8W031 263 aaPredicted RBP15.54■□□□□ 0.08
PTCD1-205ENST00000485746 TRAF5O00463 557 aa15.54■□□□□ 0.08
PTCD1-205ENST00000485746 EGFRP00533 1210 aa15.54■□□□□ 0.08
PTCD1-205ENST00000485746 CHAF1AQ13111 956 aaPredicted RBP15.54■□□□□ 0.08
PTCD1-205ENST00000485746 KRT26Q7Z3Y9 468 aa15.54■□□□□ 0.08
PTCD1-205ENST00000485746 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.54■□□□□ 0.08
PTCD1-205ENST00000485746 PANK1Q8TE04 598 aa15.54■□□□□ 0.08
PTCD1-205ENST00000485746 KLRG1Q96E93 195 aa15.54■□□□□ 0.08
PTCD1-205ENST00000485746 PGAP2Q9UHJ9 254 aa15.54■□□□□ 0.08
PTCD1-205ENST00000485746 ABT1Q9ULW3 272 aaKnown RBP15.54■□□□□ 0.08
PTCD1-205ENST00000485746 IRS2Q9Y4H2 1338 aa15.53■□□□□ 0.08
PTCD1-205ENST00000485746 SASH1O94885 1247 aa15.53■□□□□ 0.08
PTCD1-205ENST00000485746 CELF2O95319 508 aaKnown RBP15.53■□□□□ 0.08
PTCD1-205ENST00000485746 RLBP1P12271 317 aa15.53■□□□□ 0.08
PTCD1-205ENST00000485746 MMP14P50281 582 aa15.53■□□□□ 0.08
PTCD1-205ENST00000485746 FMR1Q06787 632 aaKnown RBP eCLIP15.53■□□□□ 0.08
PTCD1-205ENST00000485746 G3BP1Q13283 466 aaKnown RBP eCLIP15.53■□□□□ 0.08
PTCD1-205ENST00000485746 ATG9AQ7Z3C6 839 aa15.53■□□□□ 0.08
PTCD1-205ENST00000485746 FBXO33Q7Z6M2 555 aa15.53■□□□□ 0.08
PTCD1-205ENST00000485746 SULF1Q8IWU6 871 aa15.53■□□□□ 0.08
PTCD1-205ENST00000485746 DNAJC5GQ8N7S2 189 aa15.53■□□□□ 0.08
PTCD1-205ENST00000485746 VGLL2Q8N8G2 317 aa15.53■□□□□ 0.08
PTCD1-205ENST00000485746 LPIN2Q92539 896 aa15.53■□□□□ 0.08
PTCD1-205ENST00000485746 COPRSQ9NQ92 184 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms