RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 FAM84BQ96KN1 310 aaPredicted RBP19.48■□□□□ 0.71
APOE-205ENST00000485628 DBNDD2Q9BQY9 259 aa19.48■□□□□ 0.71
APOE-205ENST00000485628 OSBPL3Q9H4L5 887 aa19.48■□□□□ 0.71
APOE-205ENST00000485628 BCS1LQ9Y276 419 aa19.48■□□□□ 0.71
APOE-205ENST00000485628 MED23Q9ULK4 1368 aa19.47■□□□□ 0.71
APOE-205ENST00000485628 KLRK1P26718 216 aa19.47■□□□□ 0.71
APOE-205ENST00000485628 ADORA1P30542 326 aa19.47■□□□□ 0.71
APOE-205ENST00000485628 DPP8Q6V1X1 898 aaPredicted RBP19.47■□□□□ 0.71
APOE-205ENST00000485628 AACSQ86V21 672 aa19.47■□□□□ 0.71
APOE-205ENST00000485628 PLEKHM2Q8IWE5 1019 aa19.47■□□□□ 0.71
APOE-205ENST00000485628 ZNF512BQ96KM6 892 aaPredicted RBP19.47■□□□□ 0.71
APOE-205ENST00000485628 CCDC8Q9H0W5 538 aaPredicted RBP19.47■□□□□ 0.71
APOE-205ENST00000485628 VPS33BQ9H267 617 aa19.47■□□□□ 0.71
APOE-205ENST00000485628 NFKBIEO00221 500 aa19.46■□□□□ 0.71
APOE-205ENST00000485628 SLC5A1P13866 664 aa19.46■□□□□ 0.71
APOE-205ENST00000485628 YBX3P16989 372 aaKnown RBP eCLIP19.46■□□□□ 0.71
APOE-205ENST00000485628 FKBP4Q02790 459 aaKnown RBP eCLIP19.46■□□□□ 0.71
APOE-205ENST00000485628 AKAP11Q9UKA4 1901 aa19.45■□□□□ 0.7
APOE-205ENST00000485628 UFL1O94874 794 aa19.45■□□□□ 0.7
APOE-205ENST00000485628 IFIT1P09914 478 aaKnown RBP19.45■□□□□ 0.7
APOE-205ENST00000485628 TMX4Q9H1E5 349 aaPredicted RBP19.45■□□□□ 0.7
APOE-205ENST00000485628 ZNF219Q9P2Y4 722 aaPredicted RBP19.45■□□□□ 0.7
APOE-205ENST00000485628 PDE1AP54750 535 aa19.44■□□□□ 0.7
APOE-205ENST00000485628 SKAP1Q86WV1 359 aa19.44■□□□□ 0.7
APOE-205ENST00000485628 WWC3Q9ULE0 1092 aa19.44■□□□□ 0.7
APOE-205ENST00000485628 CHD4Q14839 1912 aa19.43■□□□□ 0.7
APOE-205ENST00000485628 IFIT2P09913 472 aaKnown RBP19.43■□□□□ 0.7
APOE-205ENST00000485628 ARID4AP29374 1257 aaPredicted RBP19.43■□□□□ 0.7
APOE-205ENST00000485628 PRELPP51888 382 aa19.43■□□□□ 0.7
APOE-205ENST00000485628 KIAA2012Q0VF49 1180 aa19.43■□□□□ 0.7
APOE-205ENST00000485628 CCDC102BQ68D86 513 aa19.43■□□□□ 0.7
APOE-205ENST00000485628 SUPT20HQ8NEM7 779 aa19.43■□□□□ 0.7
APOE-205ENST00000485628 PI4K2BQ8TCG2 481 aa19.43■□□□□ 0.7
APOE-205ENST00000485628 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.43■□□□□ 0.7
APOE-205ENST00000485628 NEUROD6Q96NK8 337 aa19.43■□□□□ 0.7
APOE-205ENST00000485628 AOX1Q06278 1338 aa19.43■□□□□ 0.7
APOE-205ENST00000485628 TTC41PQ6P2S7 1318 aa19.43■□□□□ 0.7
APOE-205ENST00000485628 SBF1O95248 1867 aa19.43■□□□□ 0.7
APOE-205ENST00000485628 COL4A5P29400 1685 aa19.43■□□□□ 0.7
APOE-205ENST00000485628 C6orf229H3BNL8 230 aa19.42■□□□□ 0.7
APOE-205ENST00000485628 IL1R1P14778 569 aa19.42■□□□□ 0.7
APOE-205ENST00000485628 ATP5JP18859 108 aa19.42■□□□□ 0.7
APOE-205ENST00000485628 MX1P20591 662 aa19.42■□□□□ 0.7
APOE-205ENST00000485628 PHKA1P46020 1223 aa19.42■□□□□ 0.7
APOE-205ENST00000485628 BCAMP50895 628 aa19.42■□□□□ 0.7
APOE-205ENST00000485628 TDRD7Q8NHU6 1098 aaKnown RBP19.42■□□□□ 0.7
APOE-205ENST00000485628 GPR101Q96P66 508 aaPredicted RBP19.42■□□□□ 0.7
APOE-205ENST00000485628 GYG1P46976 350 aa19.41■□□□□ 0.7
APOE-205ENST00000485628 KCNJ4P48050 445 aa19.41■□□□□ 0.7
APOE-205ENST00000485628 WASHC4Q2M389 1173 aa19.41■□□□□ 0.7
APOE-205ENST00000485628 EYA3Q99504 573 aa19.41■□□□□ 0.7
APOE-205ENST00000485628 ECHDC1Q9NTX5 307 aa19.41■□□□□ 0.7
APOE-205ENST00000485628 ZNF646O15015 1829 aaPredicted RBP19.41■□□□□ 0.7
APOE-205ENST00000485628 UTRNP46939 3433 aa19.4■□□□□ 0.7
APOE-205ENST00000485628 HIBADHP31937 336 aaKnown RBP19.4■□□□□ 0.7
APOE-205ENST00000485628 TAOK3Q9H2K8 898 aa19.4■□□□□ 0.7
APOE-205ENST00000485628 CD209Q9NNX6 404 aa19.4■□□□□ 0.7
APOE-205ENST00000485628 ZBTB47Q9UFB7 747 aaPredicted RBP19.4■□□□□ 0.7
APOE-205ENST00000485628 PDS5AQ29RF7 1337 aaKnown RBP19.4■□□□□ 0.7
APOE-205ENST00000485628 DICER1Q9UPY3 1922 aaKnown RBP19.39■□□□□ 0.7
APOE-205ENST00000485628 CAVIN4Q5BKX8 364 aa19.39■□□□□ 0.69
APOE-205ENST00000485628 ZC3H12CQ9C0D7 883 aaKnown RBP19.39■□□□□ 0.69
APOE-205ENST00000485628 COA1Q9GZY4 146 aa19.39■□□□□ 0.69
APOE-205ENST00000485628 CCDC88AQ3V6T2 1871 aa19.39■□□□□ 0.69
APOE-205ENST00000485628 SEMA3EO15041 775 aa19.38■□□□□ 0.69
APOE-205ENST00000485628 COL1A1P02452 1464 aaPredicted RBP19.38■□□□□ 0.69
APOE-205ENST00000485628 UQCRFS1P1P0C7P4 283 aa19.38■□□□□ 0.69
APOE-205ENST00000485628 IARSP41252 1262 aaKnown RBP19.38■□□□□ 0.69
APOE-205ENST00000485628 SCARF1Q14162 830 aa19.38■□□□□ 0.69
APOE-205ENST00000485628 SCN9AQ15858 1988 aa19.38■□□□□ 0.69
APOE-205ENST00000485628 CCDC158Q5M9N0 1113 aa19.38■□□□□ 0.69
APOE-205ENST00000485628 ZNF277Q9NRM2 450 aaPredicted RBP19.38■□□□□ 0.69
APOE-205ENST00000485628 PSME4Q14997 1843 aa19.37■□□□□ 0.69
APOE-205ENST00000485628 MCAMP43121 646 aa19.37■□□□□ 0.69
APOE-205ENST00000485628 AOC3Q16853 763 aa19.37■□□□□ 0.69
APOE-205ENST00000485628 ZNF804AQ7Z570 1209 aa19.37■□□□□ 0.69
APOE-205ENST00000485628 RIMBP2O15034 1052 aa19.36■□□□□ 0.69
APOE-205ENST00000485628 GLRX3O76003 335 aaKnown RBP19.36■□□□□ 0.69
APOE-205ENST00000485628 RASSF7Q02833 373 aa19.36■□□□□ 0.69
APOE-205ENST00000485628 RASGRF1Q13972 1273 aa19.36■□□□□ 0.69
APOE-205ENST00000485628 TSHZ3Q63HK5 1081 aa19.36■□□□□ 0.69
APOE-205ENST00000485628 PODNQ7Z5L7 613 aa19.36■□□□□ 0.69
APOE-205ENST00000485628 HAUS7Q99871 368 aa19.36■□□□□ 0.69
APOE-205ENST00000485628 HMG20BQ9P0W2 317 aa19.36■□□□□ 0.69
APOE-205ENST00000485628 FAM205AQ6ZU69 1335 aa19.35■□□□□ 0.69
APOE-205ENST00000485628 YDJCA8MPS7 323 aa19.35■□□□□ 0.69
APOE-205ENST00000485628 PPIP5K2O43314 1243 aa19.35■□□□□ 0.69
APOE-205ENST00000485628 MYH13Q9UKX3 1938 aa19.35■□□□□ 0.69
APOE-205ENST00000485628 ERC2O15083 957 aa19.34■□□□□ 0.69
APOE-205ENST00000485628 GRIN3BO60391 1043 aa19.34■□□□□ 0.69
APOE-205ENST00000485628 GSPT1P15170 499 aaKnown RBP19.34■□□□□ 0.69
APOE-205ENST00000485628 TTC39AQ5SRH9 613 aa19.34■□□□□ 0.69
APOE-205ENST00000485628 GORABQ5T7V8 394 aa19.34■□□□□ 0.69
APOE-205ENST00000485628 TTC22Q5TAA0 569 aa19.34■□□□□ 0.69
APOE-205ENST00000485628 ARHGAP27Q6ZUM4 889 aa19.34■□□□□ 0.69
APOE-205ENST00000485628 GPATCH3Q96I76 525 aa19.34■□□□□ 0.69
APOE-205ENST00000485628 GNL3LQ9NVN8 582 aaKnown RBP19.34■□□□□ 0.69
APOE-205ENST00000485628 SALL1Q9NSC2 1324 aa19.33■□□□□ 0.69
APOE-205ENST00000485628 DOK7Q18PE1 504 aa19.33■□□□□ 0.68
APOE-205ENST00000485628 PI16Q6UXB8 463 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms