RNA–Protein interactions for RNA: ENST00000485610.5

SMARCD3-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best)

Gene SMARCD3, Length 1,480 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-212ENST00000485610 SNAP23O00161 211 aa21.71■■□□□ 1.07
SMARCD3-212ENST00000485610 ADORA1P30542 326 aa21.71■■□□□ 1.07
SMARCD3-212ENST00000485610 DALRD3Q5D0E6 543 aaKnown RBP21.71■■□□□ 1.07
SMARCD3-212ENST00000485610 ECHDC1Q9NTX5 307 aa21.71■■□□□ 1.07
SMARCD3-212ENST00000485610 UFL1O94874 794 aa21.7■■□□□ 1.06
SMARCD3-212ENST00000485610 GRIPAP1Q4V328 841 aa21.7■■□□□ 1.06
SMARCD3-212ENST00000485610 GORABQ5T7V8 394 aa21.7■■□□□ 1.06
SMARCD3-212ENST00000485610 OLFM4Q6UX06 510 aa21.7■■□□□ 1.06
SMARCD3-212ENST00000485610 MPNDQ8N594 471 aa21.7■■□□□ 1.06
SMARCD3-212ENST00000485610 ERC2O15083 957 aa21.69■■□□□ 1.06
SMARCD3-212ENST00000485610 SOGA3Q5TF21 947 aa21.69■■□□□ 1.06
SMARCD3-212ENST00000485610 DPP8Q6V1X1 898 aaPredicted RBP21.69■■□□□ 1.06
SMARCD3-212ENST00000485610 ZNF219Q9P2Y4 722 aaPredicted RBP21.69■■□□□ 1.06
SMARCD3-212ENST00000485610 C21orf2O43822 256 aa21.68■■□□□ 1.06
SMARCD3-212ENST00000485610 CCDC93Q567U6 631 aa21.68■■□□□ 1.06
SMARCD3-212ENST00000485610 TSHZ3Q63HK5 1081 aa21.68■■□□□ 1.06
SMARCD3-212ENST00000485610 TBC1D16Q8TBP0 767 aa21.68■■□□□ 1.06
SMARCD3-212ENST00000485610 MED23Q9ULK4 1368 aa21.67■■□□□ 1.06
SMARCD3-212ENST00000485610 GLRX3O76003 335 aaKnown RBP21.67■■□□□ 1.06
SMARCD3-212ENST00000485610 CCDC158Q5M9N0 1113 aa21.67■■□□□ 1.06
SMARCD3-212ENST00000485610 C15orf52Q6ZUT6 534 aaKnown RBP21.67■■□□□ 1.06
SMARCD3-212ENST00000485610 PI4K2BQ8TCG2 481 aa21.67■■□□□ 1.06
SMARCD3-212ENST00000485610 IRS2Q9Y4H2 1338 aa21.67■■□□□ 1.06
SMARCD3-212ENST00000485610 MYH7P12883 1935 aa21.66■■□□□ 1.06
SMARCD3-212ENST00000485610 WTIPA6NIX2 430 aaPredicted RBP21.66■■□□□ 1.06
SMARCD3-212ENST00000485610 TTC22Q5TAA0 569 aa21.66■■□□□ 1.06
SMARCD3-212ENST00000485610 POLLQ9UGP5 575 aa21.66■■□□□ 1.06
SMARCD3-212ENST00000485610 C6orf229H3BNL8 230 aa21.65■■□□□ 1.06
SMARCD3-212ENST00000485610 ATP5JP18859 108 aa21.65■■□□□ 1.06
SMARCD3-212ENST00000485610 KLRK1P26718 216 aa21.65■■□□□ 1.06
SMARCD3-212ENST00000485610 CAVIN4Q5BKX8 364 aa21.65■■□□□ 1.06
SMARCD3-212ENST00000485610 TTC39AQ5SRH9 613 aa21.65■■□□□ 1.06
SMARCD3-212ENST00000485610 CCDC102BQ68D86 513 aa21.65■■□□□ 1.06
SMARCD3-212ENST00000485610 RTKN2Q8IZC4 609 aa21.65■■□□□ 1.06
SMARCD3-212ENST00000485610 CHD4Q14839 1912 aa21.65■■□□□ 1.06
SMARCD3-212ENST00000485610 PHKA1P46020 1223 aa21.64■■□□□ 1.06
SMARCD3-212ENST00000485610 SYT17Q9BSW7 474 aa21.64■■□□□ 1.06
SMARCD3-212ENST00000485610 RTFDC1Q9BY42 306 aaPredicted RBP21.64■■□□□ 1.06
SMARCD3-212ENST00000485610 WWC3Q9ULE0 1092 aa21.64■■□□□ 1.06
SMARCD3-212ENST00000485610 BCS1LQ9Y276 419 aa21.64■■□□□ 1.06
SMARCD3-212ENST00000485610 UQCRFS1P1P0C7P4 283 aa21.64■■□□□ 1.05
SMARCD3-212ENST00000485610 ARID4AP29374 1257 aaPredicted RBP21.64■■□□□ 1.05
SMARCD3-212ENST00000485610 GYG1P46976 350 aa21.64■■□□□ 1.05
SMARCD3-212ENST00000485610 SUPT20HQ8NEM7 779 aa21.64■■□□□ 1.05
SMARCD3-212ENST00000485610 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.64■■□□□ 1.05
SMARCD3-212ENST00000485610 ZNF512BQ96KM6 892 aaPredicted RBP21.64■■□□□ 1.05
SMARCD3-212ENST00000485610 EYA3Q99504 573 aa21.64■■□□□ 1.05
SMARCD3-212ENST00000485610 DOCK2Q92608 1830 aa21.63■■□□□ 1.05
SMARCD3-212ENST00000485610 CCDC88AQ3V6T2 1871 aa21.63■■□□□ 1.05
SMARCD3-212ENST00000485610 MYO5AQ9Y4I1 1855 aaKnown RBP21.63■■□□□ 1.05
SMARCD3-212ENST00000485610 BMP2KLQ5H9B9 411 aa21.63■■□□□ 1.05
SMARCD3-212ENST00000485610 VPS37DQ86XT2 251 aa21.63■■□□□ 1.05
SMARCD3-212ENST00000485610 GPR101Q96P66 508 aaPredicted RBP21.63■■□□□ 1.05
SMARCD3-212ENST00000485610 GSPT1P15170 499 aaKnown RBP21.62■■□□□ 1.05
SMARCD3-212ENST00000485610 BCAMP50895 628 aa21.62■■□□□ 1.05
SMARCD3-212ENST00000485610 ZNF804AQ7Z570 1209 aa21.62■■□□□ 1.05
SMARCD3-212ENST00000485610 FBXO33Q7Z6M2 555 aa21.62■■□□□ 1.05
SMARCD3-212ENST00000485610 FAM84BQ96KN1 310 aaPredicted RBP21.62■■□□□ 1.05
SMARCD3-212ENST00000485610 PSMD1Q99460 953 aa21.62■■□□□ 1.05
SMARCD3-212ENST00000485610 GNL3LQ9NVN8 582 aaKnown RBP21.62■■□□□ 1.05
SMARCD3-212ENST00000485610 PSME4Q14997 1843 aa21.61■■□□□ 1.05
SMARCD3-212ENST00000485610 HIBADHP31937 336 aaKnown RBP21.61■■□□□ 1.05
SMARCD3-212ENST00000485610 TXNRD3Q86VQ6 643 aa21.61■■□□□ 1.05
SMARCD3-212ENST00000485610 BOLA2Q9H3K6 86 aa21.61■■□□□ 1.05
SMARCD3-212ENST00000485610 HAUS7Q99871 368 aa21.6■■□□□ 1.05
SMARCD3-212ENST00000485610 SEMA3EO15041 775 aa21.59■■□□□ 1.05
SMARCD3-212ENST00000485610 ZBTB22O15209 634 aa21.59■■□□□ 1.05
SMARCD3-212ENST00000485610 FKBP4Q02790 459 aaKnown RBP eCLIP21.59■■□□□ 1.05
SMARCD3-212ENST00000485610 WASHC4Q2M389 1173 aa21.59■■□□□ 1.05
SMARCD3-212ENST00000485610 ZC3H12CQ9C0D7 883 aaKnown RBP21.59■■□□□ 1.05
SMARCD3-212ENST00000485610 DICER1Q9UPY3 1922 aaKnown RBP21.58■■□□□ 1.05
SMARCD3-212ENST00000485610 MCAMP43121 646 aa21.58■■□□□ 1.05
SMARCD3-212ENST00000485610 RASGRF1Q13972 1273 aa21.58■■□□□ 1.05
SMARCD3-212ENST00000485610 COL1A1P02452 1464 aaPredicted RBP21.58■■□□□ 1.05
SMARCD3-212ENST00000485610 SCARF1Q14162 830 aa21.58■■□□□ 1.04
SMARCD3-212ENST00000485610 DNAJC2Q99543 621 aaKnown RBP21.58■■□□□ 1.04
SMARCD3-212ENST00000485610 SCN9AQ15858 1988 aa21.57■■□□□ 1.04
SMARCD3-212ENST00000485610 SBF1O95248 1867 aa21.57■■□□□ 1.04
SMARCD3-212ENST00000485610 ZNF646O15015 1829 aaPredicted RBP21.57■■□□□ 1.04
SMARCD3-212ENST00000485610 MAST2Q6P0Q8 1798 aa21.57■■□□□ 1.04
SMARCD3-212ENST00000485610 PDS5AQ29RF7 1337 aaKnown RBP21.57■■□□□ 1.04
SMARCD3-212ENST00000485610 LTBP3Q9NS15 1303 aa21.57■■□□□ 1.04
SMARCD3-212ENST00000485610 TRIM6-TRIM34B2RNG4 842 aa21.57■■□□□ 1.04
SMARCD3-212ENST00000485610 RIMBP2O15034 1052 aa21.57■■□□□ 1.04
SMARCD3-212ENST00000485610 COA1Q9GZY4 146 aa21.57■■□□□ 1.04
SMARCD3-212ENST00000485610 TAOK3Q9H2K8 898 aa21.57■■□□□ 1.04
SMARCD3-212ENST00000485610 SDSP20132 328 aa21.56■■□□□ 1.04
SMARCD3-212ENST00000485610 KIAA2012Q0VF49 1180 aa21.56■■□□□ 1.04
SMARCD3-212ENST00000485610 CNTROBQ8N137 903 aa21.56■■□□□ 1.04
SMARCD3-212ENST00000485610 SPATA5Q8NB90 893 aa21.56■■□□□ 1.04
SMARCD3-212ENST00000485610 CD209Q9NNX6 404 aa21.56■■□□□ 1.04
SMARCD3-212ENST00000485610 HMG20BQ9P0W2 317 aa21.56■■□□□ 1.04
SMARCD3-212ENST00000485610 DENND2AQ9ULE3 1009 aa21.56■■□□□ 1.04
SMARCD3-212ENST00000485610 IQSEC3Q9UPP2 1182 aaPredicted RBP21.56■■□□□ 1.04
SMARCD3-212ENST00000485610 MAP4K4O95819 1239 aaPredicted RBP21.55■■□□□ 1.04
SMARCD3-212ENST00000485610 IL1R1P14778 569 aa21.55■■□□□ 1.04
SMARCD3-212ENST00000485610 PI16Q6UXB8 463 aa21.55■■□□□ 1.04
SMARCD3-212ENST00000485610 PELP1Q8IZL8 1130 aaKnown RBP21.55■■□□□ 1.04
SMARCD3-212ENST00000485610 TDRD7Q8NHU6 1098 aaKnown RBP21.55■■□□□ 1.04
SMARCD3-212ENST00000485610 EVI5LQ96CN4 794 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms