RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 CENPFP49454 3210 aa8.44□□□□□ -1.06
CAPN13-206ENST00000485248 TESPA1A2RU30 521 aaPredicted RBP8.44□□□□□ -1.06
CAPN13-206ENST00000485248 GNRH1P01148 92 aa8.44□□□□□ -1.06
CAPN13-206ENST00000485248 BCAMP50895 628 aa8.44□□□□□ -1.06
CAPN13-206ENST00000485248 PRMT2P55345 433 aa8.44□□□□□ -1.06
CAPN13-206ENST00000485248 PTPN12Q05209 780 aaKnown RBP8.44□□□□□ -1.06
CAPN13-206ENST00000485248 MAP3K12Q12852 859 aa8.44□□□□□ -1.06
CAPN13-206ENST00000485248 ZNF697Q5TEC3 545 aa8.44□□□□□ -1.06
CAPN13-206ENST00000485248 MAFAQ8NHW3 353 aaPredicted RBP8.44□□□□□ -1.06
CAPN13-206ENST00000485248 TESK2Q96S53 571 aa8.44□□□□□ -1.06
CAPN13-206ENST00000485248 MYOZ2Q9NPC6 264 aa8.44□□□□□ -1.06
CAPN13-206ENST00000485248 ZNF646O15015 1829 aaPredicted RBP8.44□□□□□ -1.06
CAPN13-206ENST00000485248 ASTN2O75129 1339 aaPredicted RBP8.44□□□□□ -1.06
CAPN13-206ENST00000485248 BTBD11A6QL63 1104 aa8.43□□□□□ -1.06
CAPN13-206ENST00000485248 IGF2BP3O00425 579 aaKnown RBP eCLIP8.43□□□□□ -1.06
CAPN13-206ENST00000485248 SEMA3EO15041 775 aa8.43□□□□□ -1.06
CAPN13-206ENST00000485248 GPTP24298 496 aa8.43□□□□□ -1.06
CAPN13-206ENST00000485248 GJA8P48165 433 aa8.43□□□□□ -1.06
CAPN13-206ENST00000485248 PRAMEF18Q5VWM3 479 aa8.43□□□□□ -1.06
CAPN13-206ENST00000485248 RAET1EQ8TD07 263 aa8.43□□□□□ -1.06
CAPN13-206ENST00000485248 SHISA4Q96DD7 197 aa8.43□□□□□ -1.06
CAPN13-206ENST00000485248 FAM161BQ96MY7 647 aa8.43□□□□□ -1.06
CAPN13-206ENST00000485248 UBE2OQ9C0C9 1292 aaKnown RBP8.43□□□□□ -1.06
CAPN13-206ENST00000485248 RNF208Q9H0X6 261 aa8.43□□□□□ -1.06
CAPN13-206ENST00000485248 NSFL1CQ9UNZ2 370 aaKnown RBP8.43□□□□□ -1.06
CAPN13-206ENST00000485248 PPP1R12BO60237 982 aaPredicted RBP8.42□□□□□ -1.06
CAPN13-206ENST00000485248 GJB1P08034 283 aa8.42□□□□□ -1.06
CAPN13-206ENST00000485248 SNRPA1P09661 255 aaKnown RBP8.42□□□□□ -1.06
CAPN13-206ENST00000485248 USP17L8P0C7I0 530 aa8.42□□□□□ -1.06
CAPN13-206ENST00000485248 PRR29P0C7W0 189 aa8.42□□□□□ -1.06
CAPN13-206ENST00000485248 CAPN2P17655 700 aa8.42□□□□□ -1.06
CAPN13-206ENST00000485248 HOXD10P28358 340 aa8.42□□□□□ -1.06
CAPN13-206ENST00000485248 TAF1CQ15572 869 aaPredicted RBP8.42□□□□□ -1.06
CAPN13-206ENST00000485248 HLFQ16534 295 aa8.42□□□□□ -1.06
CAPN13-206ENST00000485248 DOK7Q18PE1 504 aa8.42□□□□□ -1.06
CAPN13-206ENST00000485248 TJAP1Q5JTD0 557 aa8.42□□□□□ -1.06
CAPN13-206ENST00000485248 SLC51AQ86UW1 340 aa8.42□□□□□ -1.06
CAPN13-206ENST00000485248 OGFOD1Q8N543 542 aa8.42□□□□□ -1.06
CAPN13-206ENST00000485248 AGBL3Q8NEM8 1001 aa8.42□□□□□ -1.06
CAPN13-206ENST00000485248 IL27Q8NEV9 243 aa8.42□□□□□ -1.06
CAPN13-206ENST00000485248 WNK4Q96J92 1243 aa8.42□□□□□ -1.06
CAPN13-206ENST00000485248 TRIM47Q96LD4 638 aa8.42□□□□□ -1.06
CAPN13-206ENST00000485248 TAF1P21675 1872 aa8.42□□□□□ -1.06
CAPN13-206ENST00000485248 CCL5P13501 91 aa8.41□□□□□ -1.06
CAPN13-206ENST00000485248 MTFR1Q15390 333 aa8.41□□□□□ -1.06
CAPN13-206ENST00000485248 E2F4Q16254 413 aa8.41□□□□□ -1.06
CAPN13-206ENST00000485248 APOBEC3FQ8IUX4 373 aaKnown RBP8.41□□□□□ -1.06
CAPN13-206ENST00000485248 C7orf61Q8IZ16 206 aa8.41□□□□□ -1.06
CAPN13-206ENST00000485248 NGEFQ8N5V2 710 aa8.41□□□□□ -1.06
CAPN13-206ENST00000485248 SIN3AQ96ST3 1273 aa8.41□□□□□ -1.06
CAPN13-206ENST00000485248 CARD14Q9BXL6 1004 aa8.41□□□□□ -1.06
CAPN13-206ENST00000485248 ZC3H12CQ9C0D7 883 aaKnown RBP8.41□□□□□ -1.06
CAPN13-206ENST00000485248 SCAF8Q9UPN6 1271 aaKnown RBP8.41□□□□□ -1.06
CAPN13-206ENST00000485248 HTTP42858 3142 aa8.4□□□□□ -1.06
CAPN13-206ENST00000485248 GNAT3A8MTJ3 354 aa8.4□□□□□ -1.06
CAPN13-206ENST00000485248 ERVV-1B6SEH8 477 aa8.4□□□□□ -1.06
CAPN13-206ENST00000485248 ZMYND10O75800 440 aa8.4□□□□□ -1.06
CAPN13-206ENST00000485248 TFRCP02786 760 aaKnown RBP8.4□□□□□ -1.06
CAPN13-206ENST00000485248 HMOX1P09601 288 aa8.4□□□□□ -1.06
CAPN13-206ENST00000485248 ZNF280AP59817 542 aaPredicted RBP8.4□□□□□ -1.06
CAPN13-206ENST00000485248 GRAPQ13588 217 aa8.4□□□□□ -1.06
CAPN13-206ENST00000485248 MTHFSDQ2M296 383 aaKnown RBP8.4□□□□□ -1.06
CAPN13-206ENST00000485248 PARP10Q53GL7 1025 aa8.4□□□□□ -1.06
CAPN13-206ENST00000485248 FAM109BQ6ICB4 259 aaPredicted RBP8.4□□□□□ -1.06
CAPN13-206ENST00000485248 RSBN1LQ6PCB5 846 aaPredicted RBP8.4□□□□□ -1.06
CAPN13-206ENST00000485248 GRAPLQ8TC17 118 aaPredicted RBP8.4□□□□□ -1.06
CAPN13-206ENST00000485248 U2AF1L4Q8WU68 220 aaKnown RBP8.4□□□□□ -1.06
CAPN13-206ENST00000485248 GUCD1Q96NT3 240 aa8.4□□□□□ -1.06
CAPN13-206ENST00000485248 GDF15Q99988 308 aa8.4□□□□□ -1.06
CAPN13-206ENST00000485248 ZMYND8Q9ULU4 1186 aaPredicted RBP8.4□□□□□ -1.06
CAPN13-206ENST00000485248 USP16Q9Y5T5 823 aa8.4□□□□□ -1.06
CAPN13-206ENST00000485248 NUP98P52948 1817 aa8.4□□□□□ -1.07
CAPN13-206ENST00000485248 RANBP2P49792 3224 aaKnown RBP8.39□□□□□ -1.07
CAPN13-206ENST00000485248 RTL9Q8NET4 1388 aa8.39□□□□□ -1.07
CAPN13-206ENST00000485248 VIL1P09327 827 aaKnown RBP8.39□□□□□ -1.07
CAPN13-206ENST00000485248 GRK4P32298 578 aa8.39□□□□□ -1.07
CAPN13-206ENST00000485248 IREB2P48200 963 aaKnown RBP8.39□□□□□ -1.07
CAPN13-206ENST00000485248 SUSD4Q5VX71 490 aa8.39□□□□□ -1.07
CAPN13-206ENST00000485248 ZNF467Q7Z7K2 595 aaPredicted RBP8.39□□□□□ -1.07
CAPN13-206ENST00000485248 C1QTNF1Q9BXJ1 281 aa8.39□□□□□ -1.07
CAPN13-206ENST00000485248 MFRPQ9BY79 579 aa8.39□□□□□ -1.07
CAPN13-206ENST00000485248 LAMB1P07942 1786 aa8.39□□□□□ -1.07
CAPN13-206ENST00000485248 SIPA1L3O60292 1781 aaPredicted RBP8.38□□□□□ -1.07
CAPN13-206ENST00000485248 MAP3K15Q6ZN16 1313 aa8.38□□□□□ -1.07
CAPN13-206ENST00000485248 SYNGAP1Q96PV0 1343 aa8.38□□□□□ -1.07
CAPN13-206ENST00000485248 PDAP1Q13442 181 aaKnown RBP8.38□□□□□ -1.07
CAPN13-206ENST00000485248 LDLRAD1Q5T700 205 aa8.38□□□□□ -1.07
CAPN13-206ENST00000485248 NECAB2Q7Z6G3 386 aa8.38□□□□□ -1.07
CAPN13-206ENST00000485248 GAS2L2Q8NHY3 880 aa8.38□□□□□ -1.07
CAPN13-206ENST00000485248 FBXW7Q969H0 707 aa8.38□□□□□ -1.07
CAPN13-206ENST00000485248 UTP14AQ9BVJ6 771 aaKnown RBP8.38□□□□□ -1.07
CAPN13-206ENST00000485248 ARIH1Q9Y4X5 557 aaPredicted RBP8.38□□□□□ -1.07
CAPN13-206ENST00000485248 COL1A1P02452 1464 aaPredicted RBP8.38□□□□□ -1.07
CAPN13-206ENST00000485248 ANKRD36CQ5JPF3 1778 aa8.38□□□□□ -1.07
CAPN13-206ENST00000485248 FAM205AQ6ZU69 1335 aa8.37□□□□□ -1.07
CAPN13-206ENST00000485248 DUOX1Q9NRD9 1551 aa8.37□□□□□ -1.07
CAPN13-206ENST00000485248 UNCXA6NJT0 531 aa8.37□□□□□ -1.07
CAPN13-206ENST00000485248 SGPL1O95470 568 aa8.37□□□□□ -1.07
CAPN13-206ENST00000485248 NTSR2O95665 410 aa8.37□□□□□ -1.07
CAPN13-206ENST00000485248 FOSL2P15408 326 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms