RNA–Protein interactions for RNA: ENST00000483560.1

SNX12-204, Transcript of sorting nexin 12, humanhuman

TSL 5

Gene SNX12, Length 700 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-204ENST00000483560 TTLL6Q8N841 843 aa8.44□□□□□ -1.06
SNX12-204ENST00000483560 NKX2-3Q8TAU0 364 aa8.44□□□□□ -1.06
SNX12-204ENST00000483560 C4BP0C0L5 1744 aa8.43□□□□□ -1.06
SNX12-204ENST00000483560 APAF1O14727 1248 aa8.43□□□□□ -1.06
SNX12-204ENST00000483560 CAMTA2O94983 1202 aa8.43□□□□□ -1.06
SNX12-204ENST00000483560 GPTP24298 496 aa8.43□□□□□ -1.06
SNX12-204ENST00000483560 MSS51Q4VC12 460 aa8.43□□□□□ -1.06
SNX12-204ENST00000483560 BRIP1Q9BX63 1249 aa8.43□□□□□ -1.06
SNX12-204ENST00000483560 PLA2G2EQ9NZK7 142 aa8.43□□□□□ -1.06
SNX12-204ENST00000483560 CARMIL3Q8ND23 1372 aa8.43□□□□□ -1.06
SNX12-204ENST00000483560 PKD1L3Q7Z443 1732 aa8.43□□□□□ -1.06
SNX12-204ENST00000483560 ANKRD26Q9UPS8 1709 aa8.43□□□□□ -1.06
SNX12-204ENST00000483560 RGPD2P0DJD1 1756 aa8.43□□□□□ -1.06
SNX12-204ENST00000483560 RTL5Q5HYW3 569 aaPredicted RBP8.42□□□□□ -1.06
SNX12-204ENST00000483560 HDGFL1Q5TGJ6 251 aa8.42□□□□□ -1.06
SNX12-204ENST00000483560 C9orf131Q5VYM1 1079 aa8.42□□□□□ -1.06
SNX12-204ENST00000483560 CLEC4GQ6UXB4 293 aa8.42□□□□□ -1.06
SNX12-204ENST00000483560 FAM160A2Q8N612 972 aaPredicted RBP8.42□□□□□ -1.06
SNX12-204ENST00000483560 PRR7Q8TB68 274 aa8.42□□□□□ -1.06
SNX12-204ENST00000483560 NYXQ9GZU5 481 aa8.42□□□□□ -1.06
SNX12-204ENST00000483560 NMRK2Q9NPI5 230 aa8.42□□□□□ -1.06
SNX12-204ENST00000483560 BABAM1Q9NWV8 329 aa8.42□□□□□ -1.06
SNX12-204ENST00000483560 RNF181Q9P0P0 153 aa8.42□□□□□ -1.06
SNX12-204ENST00000483560 PDZRN3Q9UPQ7 1066 aa8.42□□□□□ -1.06
SNX12-204ENST00000483560 ELL2O00472 640 aaPredicted RBP8.41□□□□□ -1.06
SNX12-204ENST00000483560 PRR5LQ6MZQ0 368 aa8.41□□□□□ -1.06
SNX12-204ENST00000483560 FAM9BQ8IZU0 186 aa8.41□□□□□ -1.06
SNX12-204ENST00000483560 RPGRQ92834 1020 aaKnown RBP8.41□□□□□ -1.06
SNX12-204ENST00000483560 CNKSR1Q969H4 720 aa8.41□□□□□ -1.06
SNX12-204ENST00000483560 CHMP4AQ9BY43 222 aa8.41□□□□□ -1.06
SNX12-204ENST00000483560 SLC6A16Q9GZN6 736 aa8.41□□□□□ -1.06
SNX12-204ENST00000483560 MRC1P22897 1456 aa8.4□□□□□ -1.06
SNX12-204ENST00000483560 C10orf71Q711Q0 1435 aa8.4□□□□□ -1.06
SNX12-204ENST00000483560 C21orf2O43822 256 aa8.4□□□□□ -1.06
SNX12-204ENST00000483560 GNAI1P63096 354 aa8.4□□□□□ -1.06
SNX12-204ENST00000483560 DESI1Q6ICB0 168 aa8.4□□□□□ -1.06
SNX12-204ENST00000483560 NBPF10Q6P3W6 841 aaKnown RBP8.4□□□□□ -1.06
SNX12-204ENST00000483560 PPP1R42Q7Z4L9 355 aa8.4□□□□□ -1.06
SNX12-204ENST00000483560 NBPF15Q8N660 670 aa8.4□□□□□ -1.06
SNX12-204ENST00000483560 JMYQ8N9B5 988 aa8.4□□□□□ -1.06
SNX12-204ENST00000483560 MAP2P11137 1827 aaKnown RBP8.4□□□□□ -1.07
SNX12-204ENST00000483560 TOGARAM1Q9Y4F4 1720 aa8.4□□□□□ -1.07
SNX12-204ENST00000483560 CICQ96RK0 1608 aaPredicted RBP8.4□□□□□ -1.07
SNX12-204ENST00000483560 KCPQ6ZWJ8 1503 aa8.39□□□□□ -1.07
SNX12-204ENST00000483560 MAP3K15Q6ZN16 1313 aa8.39□□□□□ -1.07
SNX12-204ENST00000483560 ERVV-1B6SEH8 477 aa8.39□□□□□ -1.07
SNX12-204ENST00000483560 CFAP99D6REC4 459 aa8.39□□□□□ -1.07
SNX12-204ENST00000483560 TCERG1O14776 1098 aaKnown RBP8.39□□□□□ -1.07
SNX12-204ENST00000483560 ANXA1P04083 346 aa8.39□□□□□ -1.07
SNX12-204ENST00000483560 GGCXP38435 758 aa8.39□□□□□ -1.07
SNX12-204ENST00000483560 RFC5P40937 340 aa8.39□□□□□ -1.07
SNX12-204ENST00000483560 HLFQ16534 295 aa8.39□□□□□ -1.07
SNX12-204ENST00000483560 HSP90AB3PQ58FF7 597 aa8.39□□□□□ -1.07
SNX12-204ENST00000483560 SOGA3Q5TF21 947 aa8.39□□□□□ -1.07
SNX12-204ENST00000483560 TTLL7Q6ZT98 887 aa8.39□□□□□ -1.07
SNX12-204ENST00000483560 COPS6Q7L5N1 327 aa8.39□□□□□ -1.07
SNX12-204ENST00000483560 XAGE3Q8WTP9 111 aa8.39□□□□□ -1.07
SNX12-204ENST00000483560 MASTLQ96GX5 879 aa8.39□□□□□ -1.07
SNX12-204ENST00000483560 PXDNLA1KZ92 1463 aa8.38□□□□□ -1.07
SNX12-204ENST00000483560 ERBB4Q15303 1308 aa8.38□□□□□ -1.07
SNX12-204ENST00000483560 KDM2BQ8NHM5 1336 aa8.38□□□□□ -1.07
SNX12-204ENST00000483560 C5P01031 1676 aa8.38□□□□□ -1.07
SNX12-204ENST00000483560 CHL1O00533 1208 aa8.38□□□□□ -1.07
SNX12-204ENST00000483560 S1PR4O95977 384 aa8.38□□□□□ -1.07
SNX12-204ENST00000483560 HSPA1AP0DMV8 641 aaKnown RBP8.38□□□□□ -1.07
SNX12-204ENST00000483560 HSPA1BP0DMV9 641 aaKnown RBP8.38□□□□□ -1.07
SNX12-204ENST00000483560 NPR1P16066 1061 aa8.38□□□□□ -1.07
SNX12-204ENST00000483560 JUNDP17535 347 aa8.38□□□□□ -1.07
SNX12-204ENST00000483560 KCNA3P22001 575 aa8.38□□□□□ -1.07
SNX12-204ENST00000483560 MMP16P51512 607 aa8.38□□□□□ -1.07
SNX12-204ENST00000483560 RASSF7Q02833 373 aa8.38□□□□□ -1.07
SNX12-204ENST00000483560 FSTL1Q12841 308 aa8.38□□□□□ -1.07
SNX12-204ENST00000483560 TMEM259Q4ZIN3 620 aa8.38□□□□□ -1.07
SNX12-204ENST00000483560 PARP10Q53GL7 1025 aa8.38□□□□□ -1.07
SNX12-204ENST00000483560 DUSP27Q5VZP5 1158 aa8.38□□□□□ -1.07
SNX12-204ENST00000483560 STYK1Q6J9G0 422 aa8.38□□□□□ -1.07
SNX12-204ENST00000483560 HELBQ8NG08 1087 aaPredicted RBP8.38□□□□□ -1.07
SNX12-204ENST00000483560 ZNF428Q96B54 188 aa8.38□□□□□ -1.07
SNX12-204ENST00000483560 RBM17Q96I25 401 aaKnown RBP8.38□□□□□ -1.07
SNX12-204ENST00000483560 UTP14AQ9BVJ6 771 aaKnown RBP8.38□□□□□ -1.07
SNX12-204ENST00000483560 STK31Q9BXU1 1019 aa8.38□□□□□ -1.07
SNX12-204ENST00000483560 IFT57Q9NWB7 429 aa8.38□□□□□ -1.07
SNX12-204ENST00000483560 CHPF2Q9P2E5 772 aa8.38□□□□□ -1.07
SNX12-204ENST00000483560 DBF4Q9UBU7 674 aaPredicted RBP8.38□□□□□ -1.07
SNX12-204ENST00000483560 QSER1Q2KHR3 1735 aa8.37□□□□□ -1.07
SNX12-204ENST00000483560 DXOO77932 396 aaKnown RBP8.37□□□□□ -1.07
SNX12-204ENST00000483560 DDX58O95786 925 aaKnown RBP8.37□□□□□ -1.07
SNX12-204ENST00000483560 LMNB1P20700 586 aa8.37□□□□□ -1.07
SNX12-204ENST00000483560 ALDH1B1P30837 517 aa8.37□□□□□ -1.07
SNX12-204ENST00000483560 KRT24Q2M2I5 525 aa8.37□□□□□ -1.07
SNX12-204ENST00000483560 ERFEQ4G0M1 354 aa8.37□□□□□ -1.07
SNX12-204ENST00000483560 PRPF40BQ6NWY9 871 aaKnown RBP8.37□□□□□ -1.07
SNX12-204ENST00000483560 TSC1Q92574 1164 aa8.37□□□□□ -1.07
SNX12-204ENST00000483560 NLRP3Q96P20 1036 aa8.37□□□□□ -1.07
SNX12-204ENST00000483560 DDX21Q9NR30 783 aaKnown RBP eCLIP8.37□□□□□ -1.07
SNX12-204ENST00000483560 MBIPQ9NS73 344 aa8.37□□□□□ -1.07
SNX12-204ENST00000483560 HYPKQ9NX55 129 aa8.37□□□□□ -1.07
SNX12-204ENST00000483560 TRMT112Q9UI30 125 aaKnown RBP8.37□□□□□ -1.07
SNX12-204ENST00000483560 PROSER3Q2NL68 480 aa8.36□□□□□ -1.07
SNX12-204ENST00000483560 CCDC93Q567U6 631 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms