RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 RHPN1Q8TCX5 695 aa22.01■■□□□ 1.11
CPNE1-224ENST00000483359 DCTPP1Q9H773 170 aa22.01■■□□□ 1.11
CPNE1-224ENST00000483359 ZNF609O15014 1411 aa22.01■■□□□ 1.11
CPNE1-224ENST00000483359 FGFR2P21802 821 aa22.01■■□□□ 1.11
CPNE1-224ENST00000483359 TIMM10P62072 90 aa22.01■■□□□ 1.11
CPNE1-224ENST00000483359 RWDD1Q9H446 243 aaPredicted RBP22.01■■□□□ 1.11
CPNE1-224ENST00000483359 A0A1B0GUL7 405 aa22■■□□□ 1.11
CPNE1-224ENST00000483359 G3V3G9 751 aa22■■□□□ 1.11
CPNE1-224ENST00000483359 SLC5A1P13866 664 aa22■■□□□ 1.11
CPNE1-224ENST00000483359 GYG1P46976 350 aa22■■□□□ 1.11
CPNE1-224ENST00000483359 DCAF8Q5TAQ9 597 aa22■■□□□ 1.11
CPNE1-224ENST00000483359 JDP2Q8WYK2 163 aa22■■□□□ 1.11
CPNE1-224ENST00000483359 LPIN2Q92539 896 aa22■■□□□ 1.11
CPNE1-224ENST00000483359 NEUROD6Q96NK8 337 aa22■■□□□ 1.11
CPNE1-224ENST00000483359 IRS2Q9Y4H2 1338 aa22■■□□□ 1.11
CPNE1-224ENST00000483359 DICER1Q9UPY3 1922 aaKnown RBP22■■□□□ 1.11
CPNE1-224ENST00000483359 IFIT1P09914 478 aaKnown RBP21.99■■□□□ 1.11
CPNE1-224ENST00000483359 NIM1KQ8IY84 436 aa21.99■■□□□ 1.11
CPNE1-224ENST00000483359 SMARCA5O60264 1052 aaPredicted RBP21.99■■□□□ 1.11
CPNE1-224ENST00000483359 ADORA1P30542 326 aa21.99■■□□□ 1.11
CPNE1-224ENST00000483359 TNNI3KQ59H18 835 aa21.99■■□□□ 1.11
CPNE1-224ENST00000483359 KIF1BPQ96EK5 621 aa21.99■■□□□ 1.11
CPNE1-224ENST00000483359 AKAP2Q9Y2D5 859 aa21.99■■□□□ 1.11
CPNE1-224ENST00000483359 FPGT-TNNI3KV9GXZ4 949 aa21.99■■□□□ 1.11
CPNE1-224ENST00000483359 ARAP2Q8WZ64 1704 aa21.98■■□□□ 1.11
CPNE1-224ENST00000483359 RAB11FIP3O75154 756 aa21.98■■□□□ 1.11
CPNE1-224ENST00000483359 CHD4Q14839 1912 aa21.98■■□□□ 1.11
CPNE1-224ENST00000483359 ECE2O60344 883 aa21.98■■□□□ 1.11
CPNE1-224ENST00000483359 LRRCC1Q9C099 1032 aa21.98■■□□□ 1.11
CPNE1-224ENST00000483359 VPS37DQ86XT2 251 aa21.97■■□□□ 1.11
CPNE1-224ENST00000483359 VPS33BQ9H267 617 aa21.97■■□□□ 1.11
CPNE1-224ENST00000483359 BCAMP50895 628 aa21.96■■□□□ 1.11
CPNE1-224ENST00000483359 ZNF804AQ7Z570 1209 aa21.96■■□□□ 1.11
CPNE1-224ENST00000483359 AACSQ86V21 672 aa21.96■■□□□ 1.11
CPNE1-224ENST00000483359 EAF2Q96CJ1 260 aaPredicted RBP21.96■■□□□ 1.11
CPNE1-224ENST00000483359 FAM84BQ96KN1 310 aaPredicted RBP21.96■■□□□ 1.11
CPNE1-224ENST00000483359 CCDC8Q9H0W5 538 aaPredicted RBP21.96■■□□□ 1.11
CPNE1-224ENST00000483359 TLR7Q9NYK1 1049 aaKnown RBP21.96■■□□□ 1.11
CPNE1-224ENST00000483359 CAVIN4Q5BKX8 364 aa21.96■■□□□ 1.11
CPNE1-224ENST00000483359 B4GALNT3Q6L9W6 998 aa21.96■■□□□ 1.11
CPNE1-224ENST00000483359 XAGE2Q96GT9 111 aa21.96■■□□□ 1.11
CPNE1-224ENST00000483359 IQSEC3Q9UPP2 1182 aaPredicted RBP21.96■■□□□ 1.11
CPNE1-224ENST00000483359 YDJCA8MPS7 323 aa21.95■■□□□ 1.1
CPNE1-224ENST00000483359 C15orf52Q6ZUT6 534 aaKnown RBP21.95■■□□□ 1.1
CPNE1-224ENST00000483359 GCC1Q96CN9 775 aa21.95■■□□□ 1.1
CPNE1-224ENST00000483359 KCNQ5Q9NR82 932 aa21.95■■□□□ 1.1
CPNE1-224ENST00000483359 HIBADHP31937 336 aaKnown RBP21.94■■□□□ 1.1
CPNE1-224ENST00000483359 CLASRPQ8N2M8 674 aaKnown RBP21.94■■□□□ 1.1
CPNE1-224ENST00000483359 DBNDD2Q9BQY9 259 aa21.94■■□□□ 1.1
CPNE1-224ENST00000483359 COA1Q9GZY4 146 aa21.94■■□□□ 1.1
CPNE1-224ENST00000483359 GPR108Q9NPR9 543 aa21.94■■□□□ 1.1
CPNE1-224ENST00000483359 ZNRF3Q9ULT6 936 aa21.94■■□□□ 1.1
CPNE1-224ENST00000483359 ZNF541Q9H0D2 1346 aa21.94■■□□□ 1.1
CPNE1-224ENST00000483359 FBXW7Q969H0 707 aa21.94■■□□□ 1.1
CPNE1-224ENST00000483359 CD209Q9NNX6 404 aa21.94■■□□□ 1.1
CPNE1-224ENST00000483359 JAG2Q9Y219 1238 aa21.94■■□□□ 1.1
CPNE1-224ENST00000483359 SCN9AQ15858 1988 aa21.93■■□□□ 1.1
CPNE1-224ENST00000483359 RAD17O75943 681 aa21.93■■□□□ 1.1
CPNE1-224ENST00000483359 GORABQ5T7V8 394 aa21.93■■□□□ 1.1
CPNE1-224ENST00000483359 ANKRD45Q5TZF3 282 aa21.93■■□□□ 1.1
CPNE1-224ENST00000483359 DBNLQ9UJU6 430 aaKnown RBP21.93■■□□□ 1.1
CPNE1-224ENST00000483359 FZD9O00144 591 aa21.92■■□□□ 1.1
CPNE1-224ENST00000483359 PHKA1P46020 1223 aa21.92■■□□□ 1.1
CPNE1-224ENST00000483359 CCDC102BQ68D86 513 aa21.92■■□□□ 1.1
CPNE1-224ENST00000483359 FRAT2O75474 233 aaPredicted RBP21.91■■□□□ 1.1
CPNE1-224ENST00000483359 IFIT2P09913 472 aaKnown RBP21.91■■□□□ 1.1
CPNE1-224ENST00000483359 EIF6P56537 245 aaKnown RBP21.91■■□□□ 1.1
CPNE1-224ENST00000483359 PODNQ7Z5L7 613 aa21.91■■□□□ 1.1
CPNE1-224ENST00000483359 FBXO33Q7Z6M2 555 aa21.91■■□□□ 1.1
CPNE1-224ENST00000483359 SMC5Q8IY18 1101 aa21.91■■□□□ 1.1
CPNE1-224ENST00000483359 CCDC136Q96JN2 1154 aa21.91■■□□□ 1.1
CPNE1-224ENST00000483359 ZBTB47Q9UFB7 747 aaPredicted RBP21.9■■□□□ 1.1
CPNE1-224ENST00000483359 CXCL9Q07325 125 aa21.9■■□□□ 1.1
CPNE1-224ENST00000483359 GJA3Q9Y6H8 435 aa21.9■■□□□ 1.1
CPNE1-224ENST00000483359 IL1R1P14778 569 aa21.89■■□□□ 1.09
CPNE1-224ENST00000483359 MYH13Q9UKX3 1938 aa21.89■■□□□ 1.09
CPNE1-224ENST00000483359 GTF2IP78347 998 aa21.88■■□□□ 1.09
CPNE1-224ENST00000483359 CHAF1AQ13111 956 aaPredicted RBP21.88■■□□□ 1.09
CPNE1-224ENST00000483359 PSMD14O00487 310 aa21.88■■□□□ 1.09
CPNE1-224ENST00000483359 CIAPIN1Q6FI81 312 aa21.88■■□□□ 1.09
CPNE1-224ENST00000483359 C16orf71Q8IYS4 520 aaPredicted RBP21.88■■□□□ 1.09
CPNE1-224ENST00000483359 LNPKQ9C0E8 428 aa21.88■■□□□ 1.09
CPNE1-224ENST00000483359 COL1A1P02452 1464 aaPredicted RBP21.88■■□□□ 1.09
CPNE1-224ENST00000483359 ZC3H4Q9UPT8 1303 aaKnown RBP21.87■■□□□ 1.09
CPNE1-224ENST00000483359 DDNO94850 711 aaPredicted RBP21.87■■□□□ 1.09
CPNE1-224ENST00000483359 TTC39AQ5SRH9 613 aa21.87■■□□□ 1.09
CPNE1-224ENST00000483359 TDRD7Q8NHU6 1098 aaKnown RBP21.87■■□□□ 1.09
CPNE1-224ENST00000483359 ZNF526Q8TF50 670 aaPredicted RBP21.87■■□□□ 1.09
CPNE1-224ENST00000483359 MXD3Q9BW11 206 aa21.87■■□□□ 1.09
CPNE1-224ENST00000483359 CCDC158Q5M9N0 1113 aa21.87■■□□□ 1.09
CPNE1-224ENST00000483359 OTUD7AQ8TE49 926 aaPredicted RBP21.87■■□□□ 1.09
CPNE1-224ENST00000483359 GNL3LQ9NVN8 582 aaKnown RBP21.87■■□□□ 1.09
CPNE1-224ENST00000483359 PSME4Q14997 1843 aa21.86■■□□□ 1.09
CPNE1-224ENST00000483359 TTLL5Q6EMB2 1281 aa21.86■■□□□ 1.09
CPNE1-224ENST00000483359 ZBTB12Q9Y330 459 aaPredicted RBP21.86■■□□□ 1.09
CPNE1-224ENST00000483359 ZNF646O15015 1829 aaPredicted RBP21.86■■□□□ 1.09
CPNE1-224ENST00000483359 USP17L3A6NCW0 530 aa21.85■■□□□ 1.09
CPNE1-224ENST00000483359 USP17L4A6NCW7 530 aa21.85■■□□□ 1.09
CPNE1-224ENST00000483359 RASGRF1Q13972 1273 aa21.85■■□□□ 1.09
CPNE1-224ENST00000483359 TSHZ3Q63HK5 1081 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms