RNA–Protein interactions for RNA: ENST00000483290.5

COMMD6-210, Transcript of COMM domain containing 6, humanhuman

TSL 2

Gene COMMD6, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-210ENST00000483290 ANKRD13AQ8IZ07 590 aa7.42□□□□□ -1.22
COMMD6-210ENST00000483290 CCDC82Q8N4S0 544 aa7.42□□□□□ -1.22
COMMD6-210ENST00000483290 MKRN1Q9UHC7 482 aaKnown RBP7.42□□□□□ -1.22
COMMD6-210ENST00000483290 C8AP07357 584 aa7.41□□□□□ -1.22
COMMD6-210ENST00000483290 CNGB1Q14028 1251 aaPredicted RBP7.41□□□□□ -1.22
COMMD6-210ENST00000483290 FAM50AQ14320 339 aaKnown RBP7.41□□□□□ -1.22
COMMD6-210ENST00000483290 CLEC10AQ8IUN9 316 aa7.41□□□□□ -1.22
COMMD6-210ENST00000483290 GIMAP7Q8NHV1 300 aa7.41□□□□□ -1.22
COMMD6-210ENST00000483290 SHKBP1Q8TBC3 707 aa7.41□□□□□ -1.22
COMMD6-210ENST00000483290 MYRFLQ96LU7 910 aa7.41□□□□□ -1.22
COMMD6-210ENST00000483290 ACIN1Q9UKV3 1341 aaKnown RBP7.41□□□□□ -1.22
COMMD6-210ENST00000483290 SART1O43290 800 aaKnown RBP7.4□□□□□ -1.22
COMMD6-210ENST00000483290 CD68P34810 354 aaPredicted RBP7.4□□□□□ -1.22
COMMD6-210ENST00000483290 SEC13P55735 322 aa7.4□□□□□ -1.22
COMMD6-210ENST00000483290 ABI1Q8IZP0 508 aa7.4□□□□□ -1.22
COMMD6-210ENST00000483290 POU5F2Q8N7G0 328 aa7.4□□□□□ -1.22
COMMD6-210ENST00000483290 NSUN5Q96P11 429 aaKnown RBP7.4□□□□□ -1.22
COMMD6-210ENST00000483290 KCNF1Q9H3M0 494 aa7.4□□□□□ -1.22
COMMD6-210ENST00000483290 MYH16Q9H6N6 1097 aa7.4□□□□□ -1.22
COMMD6-210ENST00000483290 KLK14Q9P0G3 267 aa7.4□□□□□ -1.22
COMMD6-210ENST00000483290 CADPSQ9ULU8 1353 aa7.39□□□□□ -1.23
COMMD6-210ENST00000483290 HMGB1P1B2RPK0 211 aaPredicted RBP7.39□□□□□ -1.23
COMMD6-210ENST00000483290 MICAL2O94851 1124 aa7.39□□□□□ -1.23
COMMD6-210ENST00000483290 SOX18P35713 384 aa7.39□□□□□ -1.23
COMMD6-210ENST00000483290 DGKZQ13574 1117 aa7.39□□□□□ -1.23
COMMD6-210ENST00000483290 FAM46AQ96IP4 442 aaKnown RBP7.39□□□□□ -1.23
COMMD6-210ENST00000483290 HINFPQ9BQA5 517 aa7.39□□□□□ -1.23
COMMD6-210ENST00000483290 KRTAP4-2Q9BYR5 136 aa7.39□□□□□ -1.23
COMMD6-210ENST00000483290 ATP9BO43861 1147 aa7.38□□□□□ -1.23
COMMD6-210ENST00000483290 XYLBO75191 536 aa7.38□□□□□ -1.23
COMMD6-210ENST00000483290 EGFRP00533 1210 aa7.38□□□□□ -1.23
COMMD6-210ENST00000483290 FAM83CQ9BQN1 747 aa7.38□□□□□ -1.23
COMMD6-210ENST00000483290 TRIM33Q9UPN9 1127 aa7.38□□□□□ -1.23
COMMD6-210ENST00000483290 RIPOR2Q9Y4F9 1068 aa7.38□□□□□ -1.23
COMMD6-210ENST00000483290 LAS1LQ9Y4W2 734 aaKnown RBP7.38□□□□□ -1.23
COMMD6-210ENST00000483290 PATL2C9JE40 543 aaKnown RBP7.37□□□□□ -1.23
COMMD6-210ENST00000483290 LINC01387J3KSC0 135 aa7.37□□□□□ -1.23
COMMD6-210ENST00000483290 CLGNO14967 610 aa7.37□□□□□ -1.23
COMMD6-210ENST00000483290 WISP1O95388 367 aa7.37□□□□□ -1.23
COMMD6-210ENST00000483290 FAM117BQ6P1L5 589 aa7.37□□□□□ -1.23
COMMD6-210ENST00000483290 FAM43BQ6ZT52 329 aaPredicted RBP7.37□□□□□ -1.23
COMMD6-210ENST00000483290 FAM20CQ8IXL6 584 aa7.37□□□□□ -1.23
COMMD6-210ENST00000483290 ZNF622Q969S3 477 aaKnown RBP eCLIP7.37□□□□□ -1.23
COMMD6-210ENST00000483290 CHMP4BQ9H444 224 aaKnown RBP7.37□□□□□ -1.23
COMMD6-210ENST00000483290 COG6Q9Y2V7 657 aa7.37□□□□□ -1.23
COMMD6-210ENST00000483290 RTCBQ9Y3I0 505 aaKnown RBP7.37□□□□□ -1.23
COMMD6-210ENST00000483290 WDR64B1ANS9 1081 aa7.36□□□□□ -1.23
COMMD6-210ENST00000483290 IGFBP4P22692 258 aa7.36□□□□□ -1.23
COMMD6-210ENST00000483290 MCM6Q14566 821 aa7.36□□□□□ -1.23
COMMD6-210ENST00000483290 DUOXA2Q1HG44 320 aa7.36□□□□□ -1.23
COMMD6-210ENST00000483290 BEND4Q6ZU67 534 aa7.36□□□□□ -1.23
COMMD6-210ENST00000483290 GALNT11Q8NCW6 608 aa7.36□□□□□ -1.23
COMMD6-210ENST00000483290 VTI1AQ96AJ9 217 aa7.36□□□□□ -1.23
COMMD6-210ENST00000483290 PIM2Q9P1W9 311 aa7.36□□□□□ -1.23
COMMD6-210ENST00000483290 FAM177BA6PVY3 158 aa7.35□□□□□ -1.23
COMMD6-210ENST00000483290 HOXD8P13378 290 aaPredicted RBP7.35□□□□□ -1.23
COMMD6-210ENST00000483290 JUNBP17275 347 aaPredicted RBP7.35□□□□□ -1.23
COMMD6-210ENST00000483290 C11orf91Q3C1V1 193 aa7.35□□□□□ -1.23
COMMD6-210ENST00000483290 SPTY2D1Q68D10 685 aaPredicted RBP7.35□□□□□ -1.23
COMMD6-210ENST00000483290 FAM9BQ8IZU0 186 aa7.35□□□□□ -1.23
COMMD6-210ENST00000483290 CMTR1Q8N1G2 835 aaKnown RBP7.35□□□□□ -1.23
COMMD6-210ENST00000483290 KLHL23Q8NBE8 558 aa7.35□□□□□ -1.23
COMMD6-210ENST00000483290 FBXL18Q96ME1 805 aa7.35□□□□□ -1.23
COMMD6-210ENST00000483290 ATG3Q9NT62 314 aa7.35□□□□□ -1.23
COMMD6-210ENST00000483290 HIF3AQ9Y2N7 669 aa7.35□□□□□ -1.23
COMMD6-210ENST00000483290 SMARCA5O60264 1052 aaPredicted RBP7.34□□□□□ -1.23
COMMD6-210ENST00000483290 MMP20O60882 483 aa7.34□□□□□ -1.23
COMMD6-210ENST00000483290 BMP3P12645 472 aa7.34□□□□□ -1.23
COMMD6-210ENST00000483290 GORABQ5T7V8 394 aa7.34□□□□□ -1.23
COMMD6-210ENST00000483290 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.34□□□□□ -1.23
COMMD6-210ENST00000483290 TMTC2Q8N394 836 aa7.34□□□□□ -1.23
COMMD6-210ENST00000483290 ANP32BQ92688 251 aaKnown RBP7.34□□□□□ -1.23
COMMD6-210ENST00000483290 LEMD3Q9Y2U8 911 aa7.34□□□□□ -1.23
COMMD6-210ENST00000483290 DKK1O94907 266 aa7.33□□□□□ -1.24
COMMD6-210ENST00000483290 AXDND1Q5T1B0 1012 aaPredicted RBP7.33□□□□□ -1.24
COMMD6-210ENST00000483290 ANKRD34AQ69YU3 496 aa7.33□□□□□ -1.24
COMMD6-210ENST00000483290 KIAA1211Q6ZU35 1233 aa7.33□□□□□ -1.24
COMMD6-210ENST00000483290 TP53INP2Q8IXH6 220 aa7.33□□□□□ -1.24
COMMD6-210ENST00000483290 RGL4Q8IZJ4 473 aa7.33□□□□□ -1.24
COMMD6-210ENST00000483290 SPACA7Q96KW9 195 aa7.33□□□□□ -1.24
COMMD6-210ENST00000483290 SMNDC1O75940 238 aaKnown RBP eCLIP7.32□□□□□ -1.24
COMMD6-210ENST00000483290 CDC27P30260 824 aa7.32□□□□□ -1.24
COMMD6-210ENST00000483290 HOXA10P31260 410 aaPredicted RBP7.32□□□□□ -1.24
COMMD6-210ENST00000483290 TXNDC11Q6PKC3 985 aa7.32□□□□□ -1.24
COMMD6-210ENST00000483290 VSIG10LQ86VR7 867 aa7.32□□□□□ -1.24
COMMD6-210ENST00000483290 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.32□□□□□ -1.24
COMMD6-210ENST00000483290 USP20Q9Y2K6 914 aa7.32□□□□□ -1.24
COMMD6-210ENST00000483290 MARCH6O60337 910 aa7.31□□□□□ -1.24
COMMD6-210ENST00000483290 CPSF6Q16630 551 aaKnown RBP eCLIP7.31□□□□□ -1.24
COMMD6-210ENST00000483290 LARP1Q6PKG0 1096 aaKnown RBP7.31□□□□□ -1.24
COMMD6-210ENST00000483290 MFSD14AQ96MC6 490 aa7.31□□□□□ -1.24
COMMD6-210ENST00000483290 CARD10Q9BWT7 1032 aa7.31□□□□□ -1.24
COMMD6-210ENST00000483290 OSBPL1AQ9BXW6 950 aa7.31□□□□□ -1.24
COMMD6-210ENST00000483290 LACRTQ9GZZ8 138 aa7.31□□□□□ -1.24
COMMD6-210ENST00000483290 QTRT2Q9H974 415 aaKnown RBP7.31□□□□□ -1.24
COMMD6-210ENST00000483290 KCNK4Q9NYG8 393 aa7.31□□□□□ -1.24
COMMD6-210ENST00000483290 CCDC39Q9UFE4 941 aa7.31□□□□□ -1.24
COMMD6-210ENST00000483290 FSCN2O14926 492 aa7.3□□□□□ -1.24
COMMD6-210ENST00000483290 TPD52L2O43399 206 aaKnown RBP7.3□□□□□ -1.24
COMMD6-210ENST00000483290 GAS2O43903 313 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms