RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 NUDT16Q96DE0 195 aaKnown RBP13.72□□□□□ -0.21
VTI1A-205ENST00000483122 PLEKHG2Q9H7P9 1386 aa13.71□□□□□ -0.21
VTI1A-205ENST00000483122 PEAK1Q9H792 1746 aa13.71□□□□□ -0.21
VTI1A-205ENST00000483122 FOXR1Q6PIV2 292 aa13.71□□□□□ -0.21
VTI1A-205ENST00000483122 CLASRPQ8N2M8 674 aaKnown RBP13.71□□□□□ -0.21
VTI1A-205ENST00000483122 GPR161Q8N6U8 529 aaKnown RBP13.71□□□□□ -0.21
VTI1A-205ENST00000483122 PARD6BQ9BYG5 372 aa13.71□□□□□ -0.21
VTI1A-205ENST00000483122 ARFGAP3Q9NP61 516 aa13.71□□□□□ -0.21
VTI1A-205ENST00000483122 GEMIN8Q9NWZ8 242 aaKnown RBP13.71□□□□□ -0.21
VTI1A-205ENST00000483122 SOX12O15370 315 aa13.71□□□□□ -0.22
VTI1A-205ENST00000483122 NRDCO43847 1150 aa13.71□□□□□ -0.22
VTI1A-205ENST00000483122 CTR9Q6PD62 1173 aa13.71□□□□□ -0.22
VTI1A-205ENST00000483122 C14orf37Q86TY3 774 aa13.71□□□□□ -0.22
VTI1A-205ENST00000483122 DCCP43146 1447 aa13.7□□□□□ -0.22
VTI1A-205ENST00000483122 LOC102724159A0A0B4J2E5 919 aa13.7□□□□□ -0.22
VTI1A-205ENST00000483122 PWP2Q15269 919 aaKnown RBP13.7□□□□□ -0.22
VTI1A-205ENST00000483122 PACS2Q86VP3 889 aa13.7□□□□□ -0.22
VTI1A-205ENST00000483122 UTP14AQ9BVJ6 771 aaKnown RBP13.7□□□□□ -0.22
VTI1A-205ENST00000483122 PA2G4Q9UQ80 394 aaKnown RBP13.7□□□□□ -0.22
VTI1A-205ENST00000483122 FMN2Q9NZ56 1722 aa13.7□□□□□ -0.22
VTI1A-205ENST00000483122 VWA3AA6NCI4 1184 aa13.7□□□□□ -0.22
VTI1A-205ENST00000483122 BIN1O00499 593 aa13.7□□□□□ -0.22
VTI1A-205ENST00000483122 CHRM1P11229 460 aaPredicted RBP13.7□□□□□ -0.22
VTI1A-205ENST00000483122 HSP90B1P14625 803 aaKnown RBP13.7□□□□□ -0.22
VTI1A-205ENST00000483122 ME1P48163 572 aa13.7□□□□□ -0.22
VTI1A-205ENST00000483122 TSGA10IPQ3SY00 556 aa13.7□□□□□ -0.22
VTI1A-205ENST00000483122 HSP90AB4PQ58FF6 505 aa13.7□□□□□ -0.22
VTI1A-205ENST00000483122 RSRC2Q7L4I2 434 aaKnown RBP13.7□□□□□ -0.22
VTI1A-205ENST00000483122 ZNF589Q86UQ0 364 aaPredicted RBP13.7□□□□□ -0.22
VTI1A-205ENST00000483122 SDF4Q9BRK5 362 aa13.7□□□□□ -0.22
VTI1A-205ENST00000483122 CACNA1FO60840 1977 aa13.69□□□□□ -0.22
VTI1A-205ENST00000483122 A0A1B0GVL5 298 aa13.69□□□□□ -0.22
VTI1A-205ENST00000483122 CCP110O43303 1012 aa13.69□□□□□ -0.22
VTI1A-205ENST00000483122 PPP2R3AQ06190 1150 aa13.69□□□□□ -0.22
VTI1A-205ENST00000483122 NCAPHQ15003 741 aa13.69□□□□□ -0.22
VTI1A-205ENST00000483122 PTPN21Q16825 1174 aa13.69□□□□□ -0.22
VTI1A-205ENST00000483122 LONRF2Q1L5Z9 754 aa13.69□□□□□ -0.22
VTI1A-205ENST00000483122 FMR1NBQ8N0W7 255 aaPredicted RBP13.69□□□□□ -0.22
VTI1A-205ENST00000483122 RBM33Q96EV2 1170 aaKnown RBP13.69□□□□□ -0.22
VTI1A-205ENST00000483122 WDR24Q96S15 920 aa13.69□□□□□ -0.22
VTI1A-205ENST00000483122 LMOD1P29536 600 aaPredicted RBP13.69□□□□□ -0.22
VTI1A-205ENST00000483122 FANCCQ00597 558 aa13.69□□□□□ -0.22
VTI1A-205ENST00000483122 PSME1Q06323 249 aa13.69□□□□□ -0.22
VTI1A-205ENST00000483122 SCRN1Q12765 414 aa13.69□□□□□ -0.22
VTI1A-205ENST00000483122 Q6ZUG5 572 aa13.69□□□□□ -0.22
VTI1A-205ENST00000483122 LRRC2Q9BYS8 371 aa13.69□□□□□ -0.22
VTI1A-205ENST00000483122 C19orf44Q9H6X5 657 aa13.69□□□□□ -0.22
VTI1A-205ENST00000483122 TOMM22Q9NS69 142 aa13.69□□□□□ -0.22
VTI1A-205ENST00000483122 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.69□□□□□ -0.22
VTI1A-205ENST00000483122 A0A1B0GUL7 405 aa13.68□□□□□ -0.22
VTI1A-205ENST00000483122 PPFIA3O75145 1194 aa13.68□□□□□ -0.22
VTI1A-205ENST00000483122 ATP1A3P13637 1013 aa13.68□□□□□ -0.22
VTI1A-205ENST00000483122 MAP3K9P80192 1104 aa13.68□□□□□ -0.22
VTI1A-205ENST00000483122 AACSQ86V21 672 aa13.68□□□□□ -0.22
VTI1A-205ENST00000483122 DPF2Q92785 391 aa13.68□□□□□ -0.22
VTI1A-205ENST00000483122 GPATCH3Q96I76 525 aa13.68□□□□□ -0.22
VTI1A-205ENST00000483122 SIL1Q9H173 461 aa13.68□□□□□ -0.22
VTI1A-205ENST00000483122 KIAA1468Q9P260 1216 aa13.68□□□□□ -0.22
VTI1A-205ENST00000483122 TAF7Q15545 349 aaPredicted RBP13.68□□□□□ -0.22
VTI1A-205ENST00000483122 TTC31Q49AM3 519 aaPredicted RBP13.68□□□□□ -0.22
VTI1A-205ENST00000483122 GOLGA6L1Q8N7Z2 621 aa13.68□□□□□ -0.22
VTI1A-205ENST00000483122 SECISBP2LQ93073 1101 aaKnown RBP13.68□□□□□ -0.22
VTI1A-205ENST00000483122 BPIFA3Q9BQP9 254 aa13.68□□□□□ -0.22
VTI1A-205ENST00000483122 SNRKQ9NRH2 765 aa13.68□□□□□ -0.22
VTI1A-205ENST00000483122 VPS18Q9P253 973 aa13.68□□□□□ -0.22
VTI1A-205ENST00000483122 PCDHA7Q9UN72 937 aa13.68□□□□□ -0.22
VTI1A-205ENST00000483122 JRKLQ9Y4A0 524 aa13.68□□□□□ -0.22
VTI1A-205ENST00000483122 NEDD4P46934 1319 aa13.67□□□□□ -0.22
VTI1A-205ENST00000483122 GUCY2CP25092 1073 aa13.67□□□□□ -0.22
VTI1A-205ENST00000483122 NDUFA8P51970 172 aa13.67□□□□□ -0.22
VTI1A-205ENST00000483122 GUCY1B3Q02153 619 aa13.67□□□□□ -0.22
VTI1A-205ENST00000483122 HDGFL1Q5TGJ6 251 aa13.67□□□□□ -0.22
VTI1A-205ENST00000483122 LEKR1Q6ZMV7 388 aa13.67□□□□□ -0.22
VTI1A-205ENST00000483122 ILDR1Q86SU0 546 aaPredicted RBP13.67□□□□□ -0.22
VTI1A-205ENST00000483122 SMARCC2Q8TAQ2 1214 aa13.67□□□□□ -0.22
VTI1A-205ENST00000483122 MRPS27Q92552 414 aaKnown RBP13.67□□□□□ -0.22
VTI1A-205ENST00000483122 PDE11AQ9HCR9 933 aa13.67□□□□□ -0.22
VTI1A-205ENST00000483122 MRFAP1Q9Y605 127 aa13.67□□□□□ -0.22
VTI1A-205ENST00000483122 CCDC61Q9Y6R9 512 aa13.67□□□□□ -0.22
VTI1A-205ENST00000483122 AKAP12Q02952 1782 aa13.67□□□□□ -0.22
VTI1A-205ENST00000483122 MED23Q9ULK4 1368 aa13.67□□□□□ -0.22
VTI1A-205ENST00000483122 MAP2K7O14733 419 aa13.66□□□□□ -0.22
VTI1A-205ENST00000483122 MAGEA9P43362 315 aa13.66□□□□□ -0.22
VTI1A-205ENST00000483122 GNG11P61952 73 aa13.66□□□□□ -0.22
VTI1A-205ENST00000483122 NBPF6Q5VWK0 638 aa13.66□□□□□ -0.22
VTI1A-205ENST00000483122 ISM2Q6H9L7 571 aa13.66□□□□□ -0.22
VTI1A-205ENST00000483122 NBPF4Q96M43 638 aa13.66□□□□□ -0.22
VTI1A-205ENST00000483122 DRC1Q96MC2 740 aa13.66□□□□□ -0.22
VTI1A-205ENST00000483122 SEC62Q99442 399 aaKnown RBP13.66□□□□□ -0.22
VTI1A-205ENST00000483122 MPHOSPH8Q99549 860 aa13.66□□□□□ -0.22
VTI1A-205ENST00000483122 CCDC8Q9H0W5 538 aaPredicted RBP13.66□□□□□ -0.22
VTI1A-205ENST00000483122 NUTM2FA1L443 756 aa13.66□□□□□ -0.22
VTI1A-205ENST00000483122 ANKRD65E5RJM6 399 aa13.66□□□□□ -0.22
VTI1A-205ENST00000483122 HIP1O00291 1037 aa13.66□□□□□ -0.22
VTI1A-205ENST00000483122 ZRSR1Q15695 479 aaKnown RBP13.66□□□□□ -0.22
VTI1A-205ENST00000483122 BEND3Q5T5X7 828 aa13.66□□□□□ -0.22
VTI1A-205ENST00000483122 NUTM2GQ5VZR2 741 aa13.66□□□□□ -0.22
VTI1A-205ENST00000483122 NAA16Q6N069 864 aaPredicted RBP13.66□□□□□ -0.22
VTI1A-205ENST00000483122 NSUN7Q8NE18 718 aaKnown RBP13.66□□□□□ -0.22
VTI1A-205ENST00000483122 RABGGTAQ92696 567 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms