RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 HOXB4P17483 251 aaPredicted RBP5.59□□□□□ -1.51
CLCC1-209ENST00000482889 DNAJA1P31689 397 aaKnown RBP5.59□□□□□ -1.51
CLCC1-209ENST00000482889 ZNF438Q7Z4V0 828 aa5.59□□□□□ -1.51
CLCC1-209ENST00000482889 USP48Q86UV5 1035 aa5.59□□□□□ -1.51
CLCC1-209ENST00000482889 GLIS3Q8NEA6 775 aa5.59□□□□□ -1.51
CLCC1-209ENST00000482889 BCO2Q9BYV7 579 aa5.59□□□□□ -1.51
CLCC1-209ENST00000482889 GSX2Q9BZM3 304 aa5.59□□□□□ -1.51
CLCC1-209ENST00000482889 BCL11AQ9H165 835 aa5.59□□□□□ -1.51
CLCC1-209ENST00000482889 LATS2Q9NRM7 1088 aa5.59□□□□□ -1.51
CLCC1-209ENST00000482889 GGT7Q9UJ14 662 aa5.59□□□□□ -1.51
CLCC1-209ENST00000482889 MKL2Q9ULH7 1088 aa5.59□□□□□ -1.51
CLCC1-209ENST00000482889 PIK3R2O00459 728 aa5.58□□□□□ -1.52
CLCC1-209ENST00000482889 GTF2F1P35269 517 aaKnown RBP eCLIP5.58□□□□□ -1.52
CLCC1-209ENST00000482889 DGKGP49619 791 aa5.58□□□□□ -1.52
CLCC1-209ENST00000482889 RASSF7Q02833 373 aa5.58□□□□□ -1.52
CLCC1-209ENST00000482889 CCINQ13939 588 aa5.58□□□□□ -1.52
CLCC1-209ENST00000482889 TAF1CQ15572 869 aaPredicted RBP5.58□□□□□ -1.52
CLCC1-209ENST00000482889 CHSY3Q70JA7 882 aa5.58□□□□□ -1.52
CLCC1-209ENST00000482889 SPATA32Q96LK8 384 aa5.58□□□□□ -1.52
CLCC1-209ENST00000482889 FRMD6Q96NE9 622 aa5.58□□□□□ -1.52
CLCC1-209ENST00000482889 TRIM56Q9BRZ2 755 aaKnown RBP5.58□□□□□ -1.52
CLCC1-209ENST00000482889 PIF1Q9H611 641 aa5.58□□□□□ -1.52
CLCC1-209ENST00000482889 SPG7Q9UQ90 795 aa5.58□□□□□ -1.52
CLCC1-209ENST00000482889 CNTNAP5Q8WYK1 1306 aa5.57□□□□□ -1.52
CLCC1-209ENST00000482889 PHACTR2O75167 634 aa5.57□□□□□ -1.52
CLCC1-209ENST00000482889 EGFRP00533 1210 aa5.57□□□□□ -1.52
CLCC1-209ENST00000482889 ATP2B1P20020 1258 aa5.57□□□□□ -1.52
CLCC1-209ENST00000482889 ALAS2P22557 587 aa5.57□□□□□ -1.52
CLCC1-209ENST00000482889 AMPD1P23109 780 aa5.57□□□□□ -1.52
CLCC1-209ENST00000482889 SNRPNP63162 240 aaKnown RBP5.57□□□□□ -1.52
CLCC1-209ENST00000482889 GRM2Q14416 872 aa5.57□□□□□ -1.52
CLCC1-209ENST00000482889 PDE12Q6L8Q7 609 aaKnown RBP5.57□□□□□ -1.52
CLCC1-209ENST00000482889 LINC00114Q6XXX2 140 aa5.57□□□□□ -1.52
CLCC1-209ENST00000482889 ZNF662Q6ZS27 426 aa5.57□□□□□ -1.52
CLCC1-209ENST00000482889 MCF2L2Q86YR7 1114 aa5.57□□□□□ -1.52
CLCC1-209ENST00000482889 GALNT12Q8IXK2 581 aa5.57□□□□□ -1.52
CLCC1-209ENST00000482889 ZNF654Q8IZM8 581 aa5.57□□□□□ -1.52
CLCC1-209ENST00000482889 SNX29Q8TEQ0 813 aa5.57□□□□□ -1.52
CLCC1-209ENST00000482889 FAM13BQ9NYF5 915 aa5.57□□□□□ -1.52
CLCC1-209ENST00000482889 XYLBO75191 536 aa5.56□□□□□ -1.52
CLCC1-209ENST00000482889 MAP3K6O95382 1288 aa5.56□□□□□ -1.52
CLCC1-209ENST00000482889 RPLP1P05386 114 aaKnown RBP5.56□□□□□ -1.52
CLCC1-209ENST00000482889 NEFLP07196 543 aa5.56□□□□□ -1.52
CLCC1-209ENST00000482889 ACPPP15309 386 aa5.56□□□□□ -1.52
CLCC1-209ENST00000482889 RBL2Q08999 1139 aa5.56□□□□□ -1.52
CLCC1-209ENST00000482889 PAK2Q13177 524 aa5.56□□□□□ -1.52
CLCC1-209ENST00000482889 CCDC144BQ3MJ40 725 aa5.56□□□□□ -1.52
CLCC1-209ENST00000482889 PEAR1Q5VY43 1037 aaPredicted RBP5.56□□□□□ -1.52
CLCC1-209ENST00000482889 ERMP1Q7Z2K6 904 aa5.56□□□□□ -1.52
CLCC1-209ENST00000482889 RAB44Q7Z6P3 723 aaPredicted RBP5.56□□□□□ -1.52
CLCC1-209ENST00000482889 ALYREFQ86V81 257 aaKnown RBP5.56□□□□□ -1.52
CLCC1-209ENST00000482889 C3orf58Q8NDZ4 430 aa5.56□□□□□ -1.52
CLCC1-209ENST00000482889 TTC16Q8NEE8 873 aa5.56□□□□□ -1.52
CLCC1-209ENST00000482889 BHMTQ93088 406 aa5.56□□□□□ -1.52
CLCC1-209ENST00000482889 INPP5FQ9Y2H2 1132 aa5.56□□□□□ -1.52
CLCC1-209ENST00000482889 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.56□□□□□ -1.52
CLCC1-209ENST00000482889 A0A1W2PP55 124 aa5.55□□□□□ -1.52
CLCC1-209ENST00000482889 GADD45BO75293 160 aaPredicted RBP5.55□□□□□ -1.52
CLCC1-209ENST00000482889 TRPA1O75762 1119 aa5.55□□□□□ -1.52
CLCC1-209ENST00000482889 SASH3O75995 380 aa5.55□□□□□ -1.52
CLCC1-209ENST00000482889 TARSP26639 723 aaKnown RBP5.55□□□□□ -1.52
CLCC1-209ENST00000482889 ADH7P40394 386 aa5.55□□□□□ -1.52
CLCC1-209ENST00000482889 XP32Q5T750 250 aa5.55□□□□□ -1.52
CLCC1-209ENST00000482889 COL13A1Q5TAT6 717 aaPredicted RBP5.55□□□□□ -1.52
CLCC1-209ENST00000482889 GPAT2Q6NUI2 795 aa5.55□□□□□ -1.52
CLCC1-209ENST00000482889 PMFBP1Q8TBY8 1022 aa5.55□□□□□ -1.52
CLCC1-209ENST00000482889 PNMA5Q96PV4 448 aa5.55□□□□□ -1.52
CLCC1-209ENST00000482889 RRAGCQ9HB90 399 aa5.55□□□□□ -1.52
CLCC1-209ENST00000482889 PRDM6Q9NQX0 595 aa5.55□□□□□ -1.52
CLCC1-209ENST00000482889 KBTBD4Q9NVX7 518 aa5.55□□□□□ -1.52
CLCC1-209ENST00000482889 NLRP2Q9NX02 1062 aa5.55□□□□□ -1.52
CLCC1-209ENST00000482889 KANSL3Q9P2N6 904 aa5.55□□□□□ -1.52
CLCC1-209ENST00000482889 SALL4Q9UJQ4 1053 aa5.55□□□□□ -1.52
CLCC1-209ENST00000482889 GNB5O14775 395 aa5.54□□□□□ -1.52
CLCC1-209ENST00000482889 FGRP09769 529 aa5.54□□□□□ -1.52
CLCC1-209ENST00000482889 ATF4P18848 351 aaPredicted RBP5.54□□□□□ -1.52
CLCC1-209ENST00000482889 NFKB1P19838 968 aa5.54□□□□□ -1.52
CLCC1-209ENST00000482889 ARID5AQ03989 594 aa5.54□□□□□ -1.52
CLCC1-209ENST00000482889 PCSK7Q16549 785 aa5.54□□□□□ -1.52
CLCC1-209ENST00000482889 HS2ST1Q7LGA3 356 aa5.54□□□□□ -1.52
CLCC1-209ENST00000482889 SUV39H2Q9H5I1 410 aa5.54□□□□□ -1.52
CLCC1-209ENST00000482889 FAM8A1Q9UBU6 413 aa5.54□□□□□ -1.52
CLCC1-209ENST00000482889 ADAMTS1Q9UHI8 967 aa5.54□□□□□ -1.52
CLCC1-209ENST00000482889 GIPC1O14908 333 aa5.53□□□□□ -1.52
CLCC1-209ENST00000482889 GJA8P48165 433 aa5.53□□□□□ -1.52
CLCC1-209ENST00000482889 ST13P50502 369 aaKnown RBP5.53□□□□□ -1.52
CLCC1-209ENST00000482889 KIAA0319Q5VV43 1072 aa5.53□□□□□ -1.52
CLCC1-209ENST00000482889 C20orf204Q6ZNR8 217 aa5.53□□□□□ -1.52
CLCC1-209ENST00000482889 KRT25Q7Z3Z0 450 aa5.53□□□□□ -1.52
CLCC1-209ENST00000482889 NLRP13Q86W25 1043 aa5.53□□□□□ -1.52
CLCC1-209ENST00000482889 UBE2OQ9C0C9 1292 aaKnown RBP5.53□□□□□ -1.52
CLCC1-209ENST00000482889 ABI2Q9NYB9 513 aaPredicted RBP5.53□□□□□ -1.52
CLCC1-209ENST00000482889 NOP53Q9NZM5 478 aaKnown RBP5.53□□□□□ -1.52
CLCC1-209ENST00000482889 ZFATQ9P243 1243 aa5.53□□□□□ -1.52
CLCC1-209ENST00000482889 FNDC3AQ9Y2H6 1198 aaKnown RBP5.53□□□□□ -1.52
CLCC1-209ENST00000482889 STARD13Q9Y3M8 1113 aa5.53□□□□□ -1.52
CLCC1-209ENST00000482889 MINDY4BA8MYZ0 360 aa5.52□□□□□ -1.53
CLCC1-209ENST00000482889 MMP20O60882 483 aa5.52□□□□□ -1.53
CLCC1-209ENST00000482889 FBXO24O75426 580 aa5.52□□□□□ -1.53
CLCC1-209ENST00000482889 IGHA1P01876 353 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms