RNA–Protein interactions for RNA: ENST00000482424.1

CLIP2-205, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 5

Gene CLIP2, Length 971 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-205ENST00000482424 RIPOR2Q9Y4F9 1068 aa25.18■■□□□ 1.62
CLIP2-205ENST00000482424 USP17L3A6NCW0 530 aa25.17■■□□□ 1.62
CLIP2-205ENST00000482424 USP17L4A6NCW7 530 aa25.17■■□□□ 1.62
CLIP2-205ENST00000482424 SNAP23O00161 211 aa25.17■■□□□ 1.62
CLIP2-205ENST00000482424 KCNJ4P48050 445 aa25.17■■□□□ 1.62
CLIP2-205ENST00000482424 ATF7IPQ6VMQ6 1270 aa25.17■■□□□ 1.62
CLIP2-205ENST00000482424 USP17L1Q7RTZ2 530 aa25.17■■□□□ 1.62
CLIP2-205ENST00000482424 AGBL3Q8NEM8 1001 aa25.17■■□□□ 1.62
CLIP2-205ENST00000482424 ZC3H15Q8WU90 426 aaKnown RBP25.17■■□□□ 1.62
CLIP2-205ENST00000482424 GMLQ99445 158 aa25.17■■□□□ 1.62
CLIP2-205ENST00000482424 PUS3Q9BZE2 481 aaKnown RBP25.17■■□□□ 1.62
CLIP2-205ENST00000482424 UBTFL1P0CB47 393 aaPredicted RBP25.16■■□□□ 1.62
CLIP2-205ENST00000482424 TRIM27P14373 513 aa25.16■■□□□ 1.62
CLIP2-205ENST00000482424 TRPM4Q8TD43 1214 aa25.16■■□□□ 1.62
CLIP2-205ENST00000482424 ZNF646O15015 1829 aaPredicted RBP25.16■■□□□ 1.62
CLIP2-205ENST00000482424 CREBZFQ9NS37 354 aa25.15■■□□□ 1.62
CLIP2-205ENST00000482424 STRIP1Q5VSL9 837 aa25.14■■□□□ 1.62
CLIP2-205ENST00000482424 HDAC5Q9UQL6 1122 aa25.14■■□□□ 1.62
CLIP2-205ENST00000482424 RFX5P48382 616 aaPredicted RBP25.13■■□□□ 1.61
CLIP2-205ENST00000482424 ZNF280AP59817 542 aaPredicted RBP25.13■■□□□ 1.61
CLIP2-205ENST00000482424 DACT2Q5SW24 774 aa25.13■■□□□ 1.61
CLIP2-205ENST00000482424 SAMD7Q7Z3H4 446 aa25.13■■□□□ 1.61
CLIP2-205ENST00000482424 FRAT1Q92837 279 aaPredicted RBP25.13■■□□□ 1.61
CLIP2-205ENST00000482424 KLRG1Q96E93 195 aa25.13■■□□□ 1.61
CLIP2-205ENST00000482424 CD209Q9NNX6 404 aa25.13■■□□□ 1.61
CLIP2-205ENST00000482424 MROH5Q6ZUA9 1318 aa25.12■■□□□ 1.61
CLIP2-205ENST00000482424 PLIN1O60240 522 aa25.12■■□□□ 1.61
CLIP2-205ENST00000482424 EGFRP00533 1210 aa25.12■■□□□ 1.61
CLIP2-205ENST00000482424 UBE4AQ14139 1066 aa25.12■■□□□ 1.61
CLIP2-205ENST00000482424 LRRC24Q50LG9 513 aa25.12■■□□□ 1.61
CLIP2-205ENST00000482424 MEIS3Q99687 375 aa25.12■■□□□ 1.61
CLIP2-205ENST00000482424 TNNQ9UQP3 1299 aa25.12■■□□□ 1.61
CLIP2-205ENST00000482424 TBC1D10BQ4KMP7 808 aaPredicted RBP25.11■■□□□ 1.61
CLIP2-205ENST00000482424 ZKSCAN2Q63HK3 967 aa25.11■■□□□ 1.61
CLIP2-205ENST00000482424 TMEM88BA6NKF7 163 aa25.1■■□□□ 1.61
CLIP2-205ENST00000482424 IL1R1P14778 569 aa25.1■■□□□ 1.61
CLIP2-205ENST00000482424 PTPN12Q05209 780 aaKnown RBP25.1■■□□□ 1.61
CLIP2-205ENST00000482424 TTLL5Q6EMB2 1281 aa25.1■■□□□ 1.61
CLIP2-205ENST00000482424 KLHDC4Q8TBB5 520 aa25.1■■□□□ 1.61
CLIP2-205ENST00000482424 MYO3BQ8WXR4 1341 aa25.1■■□□□ 1.61
CLIP2-205ENST00000482424 GNAI3P08754 354 aa25.09■■□□□ 1.61
CLIP2-205ENST00000482424 USP17L8P0C7I0 530 aa25.09■■□□□ 1.61
CLIP2-205ENST00000482424 VGLL2Q8N8G2 317 aa25.09■■□□□ 1.61
CLIP2-205ENST00000482424 LRRFIP2Q9Y608 721 aaKnown RBP25.09■■□□□ 1.61
CLIP2-205ENST00000482424 KIF4BQ2VIQ3 1234 aa25.08■■□□□ 1.61
CLIP2-205ENST00000482424 ZNF804AQ7Z570 1209 aa25.08■■□□□ 1.61
CLIP2-205ENST00000482424 JMYQ8N9B5 988 aa25.08■■□□□ 1.61
CLIP2-205ENST00000482424 PDE8BO95263 885 aa25.07■■□□□ 1.6
CLIP2-205ENST00000482424 MMP14P50281 582 aa25.07■■□□□ 1.6
CLIP2-205ENST00000482424 GTF2IP78347 998 aa25.07■■□□□ 1.6
CLIP2-205ENST00000482424 FMR1Q06787 632 aaKnown RBP eCLIP25.07■■□□□ 1.6
CLIP2-205ENST00000482424 CDC37L1Q7L3B6 337 aa25.07■■□□□ 1.6
CLIP2-205ENST00000482424 CLUAP1Q96AJ1 413 aa25.07■■□□□ 1.6
CLIP2-205ENST00000482424 MXD3Q9BW11 206 aa25.07■■□□□ 1.6
CLIP2-205ENST00000482424 FBXO3Q9UK99 471 aa25.07■■□□□ 1.6
CLIP2-205ENST00000482424 TRPM7Q96QT4 1865 aa25.06■■□□□ 1.6
CLIP2-205ENST00000482424 EYA2O00167 538 aa25.06■■□□□ 1.6
CLIP2-205ENST00000482424 TRAF5O00463 557 aa25.06■■□□□ 1.6
CLIP2-205ENST00000482424 METTL24Q5JXM2 366 aa25.06■■□□□ 1.6
CLIP2-205ENST00000482424 RBM26Q5T8P6 1007 aaKnown RBP25.06■■□□□ 1.6
CLIP2-205ENST00000482424 FAM84BQ96KN1 310 aaPredicted RBP25.05■■□□□ 1.6
CLIP2-205ENST00000482424 GLIS2Q9BZE0 524 aaPredicted RBP25.05■■□□□ 1.6
CLIP2-205ENST00000482424 MYOZ2Q9NPC6 264 aa25.05■■□□□ 1.6
CLIP2-205ENST00000482424 POLR2AP24928 1970 aaKnown RBP25.04■■□□□ 1.6
CLIP2-205ENST00000482424 MTX1Q13505 466 aa25.04■■□□□ 1.6
CLIP2-205ENST00000482424 CST9Q5W186 159 aa25.04■■□□□ 1.6
CLIP2-205ENST00000482424 ATG9AQ7Z3C6 839 aa25.04■■□□□ 1.6
CLIP2-205ENST00000482424 TMEM57Q8N5G2 664 aa25.04■■□□□ 1.6
CLIP2-205ENST00000482424 TDRD7Q8NHU6 1098 aaKnown RBP25.04■■□□□ 1.6
CLIP2-205ENST00000482424 FBXW7Q969H0 707 aa25.04■■□□□ 1.6
CLIP2-205ENST00000482424 CIAO1O76071 339 aa25.03■■□□□ 1.6
CLIP2-205ENST00000482424 FKBP1AP62942 108 aaKnown RBP25.03■■□□□ 1.6
CLIP2-205ENST00000482424 SASH1O94885 1247 aa25.02■■□□□ 1.6
CLIP2-205ENST00000482424 FGFR2P21802 821 aa25.02■■□□□ 1.6
CLIP2-205ENST00000482424 HIBADHP31937 336 aaKnown RBP25.02■■□□□ 1.6
CLIP2-205ENST00000482424 GYG1P46976 350 aa25.02■■□□□ 1.6
CLIP2-205ENST00000482424 FBXO33Q7Z6M2 555 aa25.02■■□□□ 1.6
CLIP2-205ENST00000482424 OGFOD1Q8N543 542 aa25.02■■□□□ 1.6
CLIP2-205ENST00000482424 COPRSQ9NQ92 184 aa25.02■■□□□ 1.6
CLIP2-205ENST00000482424 CNTNAP1P78357 1384 aa25.02■■□□□ 1.6
CLIP2-205ENST00000482424 SCARF1Q14162 830 aa25.01■■□□□ 1.59
CLIP2-205ENST00000482424 CERS5Q8N5B7 392 aa25.01■■□□□ 1.59
CLIP2-205ENST00000482424 DCPSQ96C86 337 aaKnown RBP25.01■■□□□ 1.59
CLIP2-205ENST00000482424 FAM205AQ6ZU69 1335 aa25.01■■□□□ 1.59
CLIP2-205ENST00000482424 RASSF10A6NK89 507 aa25■■□□□ 1.59
CLIP2-205ENST00000482424 GNAI2P04899 355 aa25■■□□□ 1.59
CLIP2-205ENST00000482424 USP48Q86UV5 1035 aa25■■□□□ 1.59
CLIP2-205ENST00000482424 DZIP1LQ8IYY4 767 aaKnown RBP25■■□□□ 1.59
CLIP2-205ENST00000482424 MKRN1Q9UHC7 482 aaKnown RBP25■■□□□ 1.59
CLIP2-205ENST00000482424 ASTN2O75129 1339 aaPredicted RBP24.99■■□□□ 1.59
CLIP2-205ENST00000482424 PUM3Q15397 648 aaKnown RBP24.99■■□□□ 1.59
CLIP2-205ENST00000482424 KRT26Q7Z3Y9 468 aa24.99■■□□□ 1.59
CLIP2-205ENST00000482424 KIAA0825Q8IV33 1275 aa24.99■■□□□ 1.59
CLIP2-205ENST00000482424 GGA3Q9NZ52 723 aa24.99■■□□□ 1.59
CLIP2-205ENST00000482424 PITPNM2Q9BZ72 1349 aa24.98■■□□□ 1.59
CLIP2-205ENST00000482424 RLBP1P12271 317 aa24.98■■□□□ 1.59
CLIP2-205ENST00000482424 HDAC9Q9UKV0 1011 aa24.98■■□□□ 1.59
CLIP2-205ENST00000482424 PA2G4Q9UQ80 394 aaKnown RBP24.98■■□□□ 1.59
CLIP2-205ENST00000482424 WNT10BO00744 389 aa24.97■■□□□ 1.59
CLIP2-205ENST00000482424 SRGAP3O43295 1099 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms