RNA–Protein interactions for RNA: ENST00000482183.1

CAPN8-208, Transcript of calpain 8, human

TSL 2

Gene CAPN8, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN8-208	ENST00000482183	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.79	□□□□□ -0.52
CAPN8-208	ENST00000482183	DDX17	Q92841	729 aa	Known RBP	11.79	□□□□□ -0.52
CAPN8-208	ENST00000482183	SMARCC1	Q92922	1105 aa	Predicted RBP	11.79	□□□□□ -0.52
CAPN8-208	ENST00000482183	MAP7D2	Q96T17	732 aa		11.79	□□□□□ -0.52
CAPN8-208	ENST00000482183	TNMD	Q9H2S6	317 aa		11.79	□□□□□ -0.52
CAPN8-208	ENST00000482183	CNNM2	Q9H8M5	875 aa		11.79	□□□□□ -0.52
CAPN8-208	ENST00000482183	CNNM1	Q9NRU3	951 aa		11.79	□□□□□ -0.52
CAPN8-208	ENST00000482183	ZNF652	Q9Y2D9	606 aa		11.79	□□□□□ -0.52
CAPN8-208	ENST00000482183	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	11.79	□□□□□ -0.52
CAPN8-208	ENST00000482183	GLI3	P10071	1580 aa		11.79	□□□□□ -0.52
CAPN8-208	ENST00000482183	CTSW	P56202	376 aa		11.78	□□□□□ -0.52
CAPN8-208	ENST00000482183	WASHC4	Q2M389	1173 aa		11.78	□□□□□ -0.52
CAPN8-208	ENST00000482183	CCDC73	Q6ZRK6	1079 aa		11.78	□□□□□ -0.52
CAPN8-208	ENST00000482183	TMTC2	Q8N394	836 aa		11.78	□□□□□ -0.52
CAPN8-208	ENST00000482183	JMY	Q8N9B5	988 aa		11.78	□□□□□ -0.52
CAPN8-208	ENST00000482183	LPIN2	Q92539	896 aa		11.78	□□□□□ -0.52
CAPN8-208	ENST00000482183	WASF1	Q92558	559 aa		11.78	□□□□□ -0.52
CAPN8-208	ENST00000482183	XAGE2	Q96GT9	111 aa		11.78	□□□□□ -0.52
CAPN8-208	ENST00000482183	TMEM87B	Q96K49	555 aa		11.78	□□□□□ -0.52
CAPN8-208	ENST00000482183	BCL9	O00512	1426 aa		11.77	□□□□□ -0.52
CAPN8-208	ENST00000482183	ABCA3	Q99758	1704 aa		11.77	□□□□□ -0.52
CAPN8-208	ENST00000482183		E7EWF7	191 aa		11.77	□□□□□ -0.53
CAPN8-208	ENST00000482183	CPLX1	O14810	134 aa		11.77	□□□□□ -0.53
CAPN8-208	ENST00000482183	NEMF	O60524	1076 aa		11.77	□□□□□ -0.53
CAPN8-208	ENST00000482183	SLC5A1	P13866	664 aa		11.77	□□□□□ -0.53
CAPN8-208	ENST00000482183	TPM4	P67936	248 aa		11.77	□□□□□ -0.53
CAPN8-208	ENST00000482183	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
CAPN8-208	ENST00000482183	PPP2R5B	Q15173	497 aa		11.77	□□□□□ -0.53
CAPN8-208	ENST00000482183	PUM3	Q15397	648 aa	Known RBP	11.77	□□□□□ -0.53
CAPN8-208	ENST00000482183	NLRP10	Q86W26	655 aa		11.77	□□□□□ -0.53
CAPN8-208	ENST00000482183	NECAB1	Q8N987	351 aa		11.77	□□□□□ -0.53
CAPN8-208	ENST00000482183	BICD2	Q8TD16	824 aa		11.77	□□□□□ -0.53
CAPN8-208	ENST00000482183	KCNG4	Q8TDN1	519 aa		11.77	□□□□□ -0.53
CAPN8-208	ENST00000482183	LEO1	Q8WVC0	666 aa	Predicted RBP	11.77	□□□□□ -0.53
CAPN8-208	ENST00000482183	BRF1	Q92994	677 aa		11.77	□□□□□ -0.53
CAPN8-208	ENST00000482183	CDC5L	Q99459	802 aa	Known RBP	11.77	□□□□□ -0.53
CAPN8-208	ENST00000482183	NACAP1	Q9BZK3	213 aa		11.77	□□□□□ -0.53
CAPN8-208	ENST00000482183	XIRP1	Q702N8	1843 aa	Known RBP	11.76	□□□□□ -0.53
CAPN8-208	ENST00000482183	PLCH1	Q4KWH8	1693 aa		11.76	□□□□□ -0.53
CAPN8-208	ENST00000482183	GADD45B	O75293	160 aa	Predicted RBP	11.76	□□□□□ -0.53
CAPN8-208	ENST00000482183	PDE8B	O95263	885 aa		11.76	□□□□□ -0.53
CAPN8-208	ENST00000482183	LARGE1	O95461	756 aa		11.76	□□□□□ -0.53
CAPN8-208	ENST00000482183	RCAN1	P53805	252 aa		11.76	□□□□□ -0.53
CAPN8-208	ENST00000482183	TIMM10	P62072	90 aa		11.76	□□□□□ -0.53
CAPN8-208	ENST00000482183	MAP3K12	Q12852	859 aa		11.76	□□□□□ -0.53
CAPN8-208	ENST00000482183	CHAF1A	Q13111	956 aa	Predicted RBP	11.76	□□□□□ -0.53
CAPN8-208	ENST00000482183	SART3	Q15020	963 aa	Known RBP	11.76	□□□□□ -0.53
CAPN8-208	ENST00000482183	ALX1	Q15699	326 aa		11.76	□□□□□ -0.53
CAPN8-208	ENST00000482183	GLIPR1L2	Q4G1C9	344 aa		11.76	□□□□□ -0.53
CAPN8-208	ENST00000482183	SYNE3	Q6ZMZ3	975 aa		11.76	□□□□□ -0.53
CAPN8-208	ENST00000482183	RBM43	Q6ZSC3	357 aa	Known RBP	11.76	□□□□□ -0.53
CAPN8-208	ENST00000482183	PIGB	Q92521	554 aa		11.76	□□□□□ -0.53
CAPN8-208	ENST00000482183	CCDC34	Q96HJ3	373 aa		11.76	□□□□□ -0.53
CAPN8-208	ENST00000482183	CLSTN2	Q9H4D0	955 aa		11.76	□□□□□ -0.53
CAPN8-208	ENST00000482183	BTG4	Q9NY30	223 aa		11.76	□□□□□ -0.53
CAPN8-208	ENST00000482183	TRMT112	Q9UI30	125 aa	Known RBP	11.76	□□□□□ -0.53
CAPN8-208	ENST00000482183	RCOR1	Q9UKL0	485 aa		11.76	□□□□□ -0.53
CAPN8-208	ENST00000482183	RTL9	Q8NET4	1388 aa		11.76	□□□□□ -0.53
CAPN8-208	ENST00000482183	DISP2	A7MBM2	1401 aa		11.76	□□□□□ -0.53
CAPN8-208	ENST00000482183	ATRN	O75882	1429 aa		11.76	□□□□□ -0.53
CAPN8-208	ENST00000482183	CCDC196	A0A1B0GTZ2	297 aa		11.75	□□□□□ -0.53
CAPN8-208	ENST00000482183	GOLGA6L19	H0YKK7	550 aa		11.75	□□□□□ -0.53
CAPN8-208	ENST00000482183	IRS4	O14654	1257 aa	Predicted RBP	11.75	□□□□□ -0.53
CAPN8-208	ENST00000482183	NRDC	O43847	1150 aa		11.75	□□□□□ -0.53
CAPN8-208	ENST00000482183	KIN	O60870	393 aa	Known RBP	11.75	□□□□□ -0.53
CAPN8-208	ENST00000482183	PC	P11498	1178 aa	Known RBP	11.75	□□□□□ -0.53
CAPN8-208	ENST00000482183	CYP19A1	P11511	503 aa	Predicted RBP	11.75	□□□□□ -0.53
CAPN8-208	ENST00000482183	CPA1	P15085	419 aa		11.75	□□□□□ -0.53
CAPN8-208	ENST00000482183	ITGA6	P23229	1130 aa		11.75	□□□□□ -0.53
CAPN8-208	ENST00000482183	CCDC152	Q4G0S7	254 aa		11.75	□□□□□ -0.53
CAPN8-208	ENST00000482183	TTLL11	Q8NHH1	800 aa		11.75	□□□□□ -0.53
CAPN8-208	ENST00000482183	KRT23	Q9C075	422 aa		11.75	□□□□□ -0.53
CAPN8-208	ENST00000482183	RNF41	Q9H4P4	317 aa	Predicted RBP	11.75	□□□□□ -0.53
CAPN8-208	ENST00000482183	GDPD2	Q9HCC8	539 aa		11.75	□□□□□ -0.53
CAPN8-208	ENST00000482183	GNL3L	Q9NVN8	582 aa	Known RBP	11.75	□□□□□ -0.53
CAPN8-208	ENST00000482183	RIPOR2	Q9Y4F9	1068 aa		11.75	□□□□□ -0.53
CAPN8-208	ENST00000482183	MAST3	O60307	1309 aa		11.75	□□□□□ -0.53
CAPN8-208	ENST00000482183		A0A1W2PQ27	194 aa		11.74	□□□□□ -0.53
CAPN8-208	ENST00000482183		A0A1W2PQ64	194 aa		11.74	□□□□□ -0.53
CAPN8-208	ENST00000482183		A0A1W2PQD8	194 aa		11.74	□□□□□ -0.53
CAPN8-208	ENST00000482183	PTPDC1	A2A3K4	754 aa		11.74	□□□□□ -0.53
CAPN8-208	ENST00000482183	YEATS4	O95619	227 aa		11.74	□□□□□ -0.53
CAPN8-208	ENST00000482183	ARID4A	P29374	1257 aa	Predicted RBP	11.74	□□□□□ -0.53
CAPN8-208	ENST00000482183	IGHMBP2	P38935	993 aa	Known RBP	11.74	□□□□□ -0.53
CAPN8-208	ENST00000482183	REST	Q13127	1097 aa		11.74	□□□□□ -0.53
CAPN8-208	ENST00000482183	TRIM29	Q14134	588 aa		11.74	□□□□□ -0.53
CAPN8-208	ENST00000482183	LRRC24	Q50LG9	513 aa		11.74	□□□□□ -0.53
CAPN8-208	ENST00000482183	CLEC4G	Q6UXB4	293 aa		11.74	□□□□□ -0.53
CAPN8-208	ENST00000482183	CDC37L1	Q7L3B6	337 aa		11.74	□□□□□ -0.53
CAPN8-208	ENST00000482183	DZIP3	Q86Y13	1208 aa	Known RBP	11.74	□□□□□ -0.53
CAPN8-208	ENST00000482183	DNAJC10	Q8IXB1	793 aa		11.74	□□□□□ -0.53
CAPN8-208	ENST00000482183	PRIMPOL	Q96LW4	560 aa		11.74	□□□□□ -0.53
CAPN8-208	ENST00000482183	MPHOSPH8	Q99549	860 aa		11.74	□□□□□ -0.53
CAPN8-208	ENST00000482183	ANO10	Q9NW15	660 aa		11.74	□□□□□ -0.53
CAPN8-208	ENST00000482183	HOOK1	Q9UJC3	728 aa	Known RBP	11.74	□□□□□ -0.53
CAPN8-208	ENST00000482183	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.74	□□□□□ -0.53
CAPN8-208	ENST00000482183	LTBP4	Q8N2S1	1624 aa		11.74	□□□□□ -0.53
CAPN8-208	ENST00000482183	TJP1	Q07157	1748 aa		11.74	□□□□□ -0.53
CAPN8-208	ENST00000482183	MYO1B	O43795	1136 aa		11.73	□□□□□ -0.53
CAPN8-208	ENST00000482183	ADCY5	O95622	1261 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms