RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 FRAT1Q92837 279 aaPredicted RBP18.59■□□□□ 0.57
OPTN-210ENST00000482140 HDAC5Q9UQL6 1122 aa18.59■□□□□ 0.57
OPTN-210ENST00000482140 CEP350Q5VT06 3117 aa18.59■□□□□ 0.57
OPTN-210ENST00000482140 TBC1D10BQ4KMP7 808 aaPredicted RBP18.58■□□□□ 0.56
OPTN-210ENST00000482140 TXNRD3Q86VQ6 643 aa18.58■□□□□ 0.56
OPTN-210ENST00000482140 AGBL3Q8NEM8 1001 aa18.58■□□□□ 0.56
OPTN-210ENST00000482140 TRPM7Q96QT4 1865 aa18.57■□□□□ 0.56
OPTN-210ENST00000482140 TMEM88BA6NKF7 163 aa18.57■□□□□ 0.56
OPTN-210ENST00000482140 SNAP23O00161 211 aa18.57■□□□□ 0.56
OPTN-210ENST00000482140 BCAR3O75815 825 aa18.57■□□□□ 0.56
OPTN-210ENST00000482140 KLRK1P26718 216 aa18.57■□□□□ 0.56
OPTN-210ENST00000482140 RBM26Q5T8P6 1007 aaKnown RBP18.57■□□□□ 0.56
OPTN-210ENST00000482140 SAMD7Q7Z3H4 446 aa18.57■□□□□ 0.56
OPTN-210ENST00000482140 ZC3H15Q8WU90 426 aaKnown RBP18.57■□□□□ 0.56
OPTN-210ENST00000482140 HIRAP54198 1017 aaPredicted RBP18.56■□□□□ 0.56
OPTN-210ENST00000482140 ZNF804AQ7Z570 1209 aa18.56■□□□□ 0.56
OPTN-210ENST00000482140 PUS3Q9BZE2 481 aaKnown RBP18.56■□□□□ 0.56
OPTN-210ENST00000482140 ZNF609O15014 1411 aa18.56■□□□□ 0.56
OPTN-210ENST00000482140 MROH5Q6ZUA9 1318 aa18.55■□□□□ 0.56
OPTN-210ENST00000482140 KIF4BQ2VIQ3 1234 aa18.55■□□□□ 0.56
OPTN-210ENST00000482140 STRIP1Q5VSL9 837 aa18.55■□□□□ 0.56
OPTN-210ENST00000482140 ATF7IPQ6VMQ6 1270 aa18.55■□□□□ 0.56
OPTN-210ENST00000482140 C15orf52Q6ZUT6 534 aaKnown RBP18.55■□□□□ 0.56
OPTN-210ENST00000482140 MYO3BQ8WXR4 1341 aa18.54■□□□□ 0.56
OPTN-210ENST00000482140 USP17L8P0C7I0 530 aa18.54■□□□□ 0.56
OPTN-210ENST00000482140 TRIM27P14373 513 aa18.54■□□□□ 0.56
OPTN-210ENST00000482140 METTL24Q5JXM2 366 aa18.54■□□□□ 0.56
OPTN-210ENST00000482140 INTS3Q68E01 1043 aaKnown RBP18.54■□□□□ 0.56
OPTN-210ENST00000482140 TTLL5Q6EMB2 1281 aa18.54■□□□□ 0.56
OPTN-210ENST00000482140 GLIS2Q9BZE0 524 aaPredicted RBP18.54■□□□□ 0.56
OPTN-210ENST00000482140 CD209Q9NNX6 404 aa18.54■□□□□ 0.56
OPTN-210ENST00000482140 PGAP2Q9UHJ9 254 aa18.54■□□□□ 0.56
OPTN-210ENST00000482140 TRAF5O00463 557 aa18.53■□□□□ 0.56
OPTN-210ENST00000482140 GTF2IP78347 998 aa18.53■□□□□ 0.56
OPTN-210ENST00000482140 UBE4AQ14139 1066 aa18.53■□□□□ 0.56
OPTN-210ENST00000482140 LRRC24Q50LG9 513 aa18.53■□□□□ 0.56
OPTN-210ENST00000482140 DACT2Q5SW24 774 aa18.53■□□□□ 0.56
OPTN-210ENST00000482140 ZKSCAN2Q63HK3 967 aa18.53■□□□□ 0.56
OPTN-210ENST00000482140 CDC37L1Q7L3B6 337 aa18.53■□□□□ 0.56
OPTN-210ENST00000482140 KLHDC4Q8TBB5 520 aa18.53■□□□□ 0.56
OPTN-210ENST00000482140 MEIS3Q99687 375 aa18.53■□□□□ 0.56
OPTN-210ENST00000482140 MKRN1Q9UHC7 482 aaKnown RBP18.53■□□□□ 0.56
OPTN-210ENST00000482140 RIPOR2Q9Y4F9 1068 aa18.53■□□□□ 0.56
OPTN-210ENST00000482140 LRRFIP2Q9Y608 721 aaKnown RBP18.53■□□□□ 0.56
OPTN-210ENST00000482140 POLR2AP24928 1970 aaKnown RBP18.53■□□□□ 0.56
OPTN-210ENST00000482140 ZNF646O15015 1829 aaPredicted RBP18.53■□□□□ 0.56
OPTN-210ENST00000482140 EGFRP00533 1210 aa18.52■□□□□ 0.56
OPTN-210ENST00000482140 GNAI3P08754 354 aa18.52■□□□□ 0.56
OPTN-210ENST00000482140 ZNF280AP59817 542 aaPredicted RBP18.52■□□□□ 0.56
OPTN-210ENST00000482140 OGFOD1Q8N543 542 aa18.52■□□□□ 0.56
OPTN-210ENST00000482140 CLUAP1Q96AJ1 413 aa18.52■□□□□ 0.56
OPTN-210ENST00000482140 DCPSQ96C86 337 aaKnown RBP18.52■□□□□ 0.56
OPTN-210ENST00000482140 GMLQ99445 158 aa18.52■□□□□ 0.56
OPTN-210ENST00000482140 MXD3Q9BW11 206 aa18.52■□□□□ 0.56
OPTN-210ENST00000482140 ABT1Q9ULW3 272 aaKnown RBP18.52■□□□□ 0.56
OPTN-210ENST00000482140 IRS2Q9Y4H2 1338 aa18.51■□□□□ 0.55
OPTN-210ENST00000482140 FMR1Q06787 632 aaKnown RBP eCLIP18.51■□□□□ 0.55
OPTN-210ENST00000482140 MYOZ2Q9NPC6 264 aa18.51■□□□□ 0.55
OPTN-210ENST00000482140 USP48Q86UV5 1035 aa18.5■□□□□ 0.55
OPTN-210ENST00000482140 GGA3Q9NZ52 723 aa18.5■□□□□ 0.55
OPTN-210ENST00000482140 HDAC9Q9UKV0 1011 aa18.5■□□□□ 0.55
OPTN-210ENST00000482140 TNNQ9UQP3 1299 aa18.5■□□□□ 0.55
OPTN-210ENST00000482140 CNTNAP1P78357 1384 aa18.5■□□□□ 0.55
OPTN-210ENST00000482140 EYA2O00167 538 aa18.49■□□□□ 0.55
OPTN-210ENST00000482140 CELF2O95319 508 aaKnown RBP18.49■□□□□ 0.55
OPTN-210ENST00000482140 IL1R1P14778 569 aa18.49■□□□□ 0.55
OPTN-210ENST00000482140 HIBADHP31937 336 aaKnown RBP18.49■□□□□ 0.55
OPTN-210ENST00000482140 RFX5P48382 616 aaPredicted RBP18.49■□□□□ 0.55
OPTN-210ENST00000482140 KRT26Q7Z3Y9 468 aa18.49■□□□□ 0.55
OPTN-210ENST00000482140 VPS37DQ86XT2 251 aa18.49■□□□□ 0.55
OPTN-210ENST00000482140 FTSJ3Q8IY81 847 aaKnown RBP18.49■□□□□ 0.55
OPTN-210ENST00000482140 JMYQ8N9B5 988 aa18.49■□□□□ 0.55
OPTN-210ENST00000482140 ZNF408Q9H9D4 720 aa18.49■□□□□ 0.55
OPTN-210ENST00000482140 PDE8BO95263 885 aa18.48■□□□□ 0.55
OPTN-210ENST00000482140 GYG1P46976 350 aa18.48■□□□□ 0.55
OPTN-210ENST00000482140 MMP14P50281 582 aa18.48■□□□□ 0.55
OPTN-210ENST00000482140 PTPN12Q05209 780 aaKnown RBP18.48■□□□□ 0.55
OPTN-210ENST00000482140 SCARF1Q14162 830 aa18.48■□□□□ 0.55
OPTN-210ENST00000482140 KIAA0825Q8IV33 1275 aa18.48■□□□□ 0.55
OPTN-210ENST00000482140 SULF1Q8IWU6 871 aa18.48■□□□□ 0.55
OPTN-210ENST00000482140 SIL1Q9H173 461 aa18.48■□□□□ 0.55
OPTN-210ENST00000482140 DEFB115Q30KQ5 88 aa18.47■□□□□ 0.55
OPTN-210ENST00000482140 CAVIN4Q5BKX8 364 aa18.47■□□□□ 0.55
OPTN-210ENST00000482140 PAXIP1Q6ZW49 1069 aaPredicted RBP18.47■□□□□ 0.55
OPTN-210ENST00000482140 TMEM57Q8N5G2 664 aa18.47■□□□□ 0.55
OPTN-210ENST00000482140 RASSF10A6NK89 507 aa18.46■□□□□ 0.55
OPTN-210ENST00000482140 FRAT2O75474 233 aaPredicted RBP18.46■□□□□ 0.55
OPTN-210ENST00000482140 IFIT1P09914 478 aaKnown RBP18.46■□□□□ 0.55
OPTN-210ENST00000482140 PUM3Q15397 648 aaKnown RBP18.46■□□□□ 0.55
OPTN-210ENST00000482140 ANGEL2Q5VTE6 544 aaKnown RBP18.46■□□□□ 0.55
OPTN-210ENST00000482140 CST9Q5W186 159 aa18.46■□□□□ 0.55
OPTN-210ENST00000482140 VGLL2Q8N8G2 317 aa18.46■□□□□ 0.55
OPTN-210ENST00000482140 FAM84BQ96KN1 310 aaPredicted RBP18.46■□□□□ 0.55
OPTN-210ENST00000482140 FBXO3Q9UK99 471 aa18.46■□□□□ 0.55
OPTN-210ENST00000482140 JAG2Q9Y219 1238 aa18.46■□□□□ 0.55
OPTN-210ENST00000482140 ASTN2O75129 1339 aaPredicted RBP18.46■□□□□ 0.55
OPTN-210ENST00000482140 ADM5C9JUS6 153 aa18.45■□□□□ 0.54
OPTN-210ENST00000482140 SASH1O94885 1247 aa18.45■□□□□ 0.54
OPTN-210ENST00000482140 GNAI2P04899 355 aa18.45■□□□□ 0.54
OPTN-210ENST00000482140 SLC5A1P13866 664 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms