RNA–Protein interactions for RNA: ENST00000482071.1

NCK1-208, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-208ENST00000482071 FOXJ1Q92949 421 aa8.04□□□□□ -1.12
NCK1-208ENST00000482071 BCL2L13Q9BXK5 485 aa8.04□□□□□ -1.12
NCK1-208ENST00000482071 ZBTB40Q9NUA8 1239 aa8.04□□□□□ -1.12
NCK1-208ENST00000482071 BCL9O00512 1426 aa8.03□□□□□ -1.12
NCK1-208ENST00000482071 PXDNLA1KZ92 1463 aa8.03□□□□□ -1.12
NCK1-208ENST00000482071 H3BM21 787 aa8.03□□□□□ -1.12
NCK1-208ENST00000482071 ADAMTS2O95450 1211 aa8.03□□□□□ -1.12
NCK1-208ENST00000482071 WDR4P57081 412 aaKnown RBP8.03□□□□□ -1.12
NCK1-208ENST00000482071 C4orf48Q5BLP8 95 aa8.03□□□□□ -1.12
NCK1-208ENST00000482071 MYSM1Q5VVJ2 828 aa8.03□□□□□ -1.12
NCK1-208ENST00000482071 LRP10Q7Z4F1 713 aa8.03□□□□□ -1.12
NCK1-208ENST00000482071 TMEM57Q8N5G2 664 aa8.03□□□□□ -1.12
NCK1-208ENST00000482071 FRAT1Q92837 279 aaPredicted RBP8.03□□□□□ -1.12
NCK1-208ENST00000482071 CLUAP1Q96AJ1 413 aa8.03□□□□□ -1.12
NCK1-208ENST00000482071 API5Q9BZZ5 524 aaKnown RBP8.03□□□□□ -1.12
NCK1-208ENST00000482071 LIMD1Q9UGP4 676 aa8.03□□□□□ -1.12
NCK1-208ENST00000482071 DDX19BQ9UMR2 479 aa8.03□□□□□ -1.12
NCK1-208ENST00000482071 COG6Q9Y2V7 657 aa8.03□□□□□ -1.12
NCK1-208ENST00000482071 EXOC5O00471 708 aa8.02□□□□□ -1.13
NCK1-208ENST00000482071 LORP23490 312 aaPredicted RBP8.02□□□□□ -1.13
NCK1-208ENST00000482071 GMPRP36959 345 aa8.02□□□□□ -1.13
NCK1-208ENST00000482071 QPCTQ16769 361 aa8.02□□□□□ -1.13
NCK1-208ENST00000482071 B4GALNT3Q6L9W6 998 aa8.02□□□□□ -1.13
NCK1-208ENST00000482071 G2E3Q7L622 706 aa8.02□□□□□ -1.13
NCK1-208ENST00000482071 IRF7Q92985 503 aa8.02□□□□□ -1.13
NCK1-208ENST00000482071 ZNF496Q96IT1 587 aaPredicted RBP8.02□□□□□ -1.13
NCK1-208ENST00000482071 DOT1LQ8TEK3 1739 aa8.02□□□□□ -1.13
NCK1-208ENST00000482071 ATRNO75882 1429 aa8.02□□□□□ -1.13
NCK1-208ENST00000482071 RREB1Q92766 1687 aa8.02□□□□□ -1.13
NCK1-208ENST00000482071 SBF2Q86WG5 1849 aa8.01□□□□□ -1.13
NCK1-208ENST00000482071 LILRB3O75022 631 aa8.01□□□□□ -1.13
NCK1-208ENST00000482071 CABP4P57796 275 aa8.01□□□□□ -1.13
NCK1-208ENST00000482071 PDE4DQ08499 809 aa8.01□□□□□ -1.13
NCK1-208ENST00000482071 CCDC136Q96JN2 1154 aa8.01□□□□□ -1.13
NCK1-208ENST00000482071 DDX21Q9NR30 783 aaKnown RBP eCLIP8.01□□□□□ -1.13
NCK1-208ENST00000482071 DBF4Q9UBU7 674 aaPredicted RBP8.01□□□□□ -1.13
NCK1-208ENST00000482071 ERBB4Q15303 1308 aa8.01□□□□□ -1.13
NCK1-208ENST00000482071 NUTM2BA6NNL0 878 aaPredicted RBP8□□□□□ -1.13
NCK1-208ENST00000482071 NUTM2EB1AL46 878 aaPredicted RBP8□□□□□ -1.13
NCK1-208ENST00000482071 NR3C2P08235 984 aa8□□□□□ -1.13
NCK1-208ENST00000482071 SNRPA1P09661 255 aaKnown RBP8□□□□□ -1.13
NCK1-208ENST00000482071 GRM5P41594 1212 aa8□□□□□ -1.13
NCK1-208ENST00000482071 VEGFBP49765 207 aa8□□□□□ -1.13
NCK1-208ENST00000482071 FLIIQ13045 1269 aa8□□□□□ -1.13
NCK1-208ENST00000482071 HDAC1Q13547 482 aaPredicted RBP8□□□□□ -1.13
NCK1-208ENST00000482071 CSPP1Q1MSJ5 1256 aa8□□□□□ -1.13
NCK1-208ENST00000482071 HDGFL1Q5TGJ6 251 aa8□□□□□ -1.13
NCK1-208ENST00000482071 NUTM2AQ8IVF1 878 aaPredicted RBP8□□□□□ -1.13
NCK1-208ENST00000482071 MARCH10Q8NA82 808 aaPredicted RBP8□□□□□ -1.13
NCK1-208ENST00000482071 NGLY1Q96IV0 654 aa8□□□□□ -1.13
NCK1-208ENST00000482071 FMNL2Q96PY5 1086 aa8□□□□□ -1.13
NCK1-208ENST00000482071 CHMP4BQ9H444 224 aaKnown RBP8□□□□□ -1.13
NCK1-208ENST00000482071 ATP10DQ9P241 1426 aa8□□□□□ -1.13
NCK1-208ENST00000482071 TJP1Q07157 1748 aa8□□□□□ -1.13
NCK1-208ENST00000482071 TCERG1O14776 1098 aaKnown RBP7.99□□□□□ -1.13
NCK1-208ENST00000482071 IGHDP01880 384 aa7.99□□□□□ -1.13
NCK1-208ENST00000482071 NR5A1Q13285 461 aa7.99□□□□□ -1.13
NCK1-208ENST00000482071 SLC39A6Q13433 755 aa7.99□□□□□ -1.13
NCK1-208ENST00000482071 SCARF1Q14162 830 aa7.99□□□□□ -1.13
NCK1-208ENST00000482071 DDB1Q16531 1140 aa7.99□□□□□ -1.13
NCK1-208ENST00000482071 CENPQQ7L2Z9 268 aaPredicted RBP7.99□□□□□ -1.13
NCK1-208ENST00000482071 SH3RF1Q7Z6J0 888 aa7.99□□□□□ -1.13
NCK1-208ENST00000482071 BPHLQ86WA6 291 aaPredicted RBP7.99□□□□□ -1.13
NCK1-208ENST00000482071 DDX54Q8TDD1 881 aaKnown RBP7.99□□□□□ -1.13
NCK1-208ENST00000482071 PIGBQ92521 554 aa7.99□□□□□ -1.13
NCK1-208ENST00000482071 PURBQ96QR8 312 aaKnown RBP7.99□□□□□ -1.13
NCK1-208ENST00000482071 C1QTNF2Q9BXJ5 285 aa7.99□□□□□ -1.13
NCK1-208ENST00000482071 STK31Q9BXU1 1019 aa7.99□□□□□ -1.13
NCK1-208ENST00000482071 ATG3Q9NT62 314 aa7.99□□□□□ -1.13
NCK1-208ENST00000482071 NUP188Q5SRE5 1749 aa7.98□□□□□ -1.13
NCK1-208ENST00000482071 PRAMEF22A3QJZ6 481 aa7.98□□□□□ -1.13
NCK1-208ENST00000482071 CANXP27824 592 aaKnown RBP7.98□□□□□ -1.13
NCK1-208ENST00000482071 CCT4P50991 539 aaKnown RBP7.98□□□□□ -1.13
NCK1-208ENST00000482071 FTSJ3Q8IY81 847 aaKnown RBP7.98□□□□□ -1.13
NCK1-208ENST00000482071 ITPKCQ96DU7 683 aa7.98□□□□□ -1.13
NCK1-208ENST00000482071 PHAXQ9H814 394 aaKnown RBP7.98□□□□□ -1.13
NCK1-208ENST00000482071 ZFAND3Q9H8U3 227 aa7.98□□□□□ -1.13
NCK1-208ENST00000482071 HYPKQ9NX55 129 aa7.98□□□□□ -1.13
NCK1-208ENST00000482071 CHPF2Q9P2E5 772 aa7.98□□□□□ -1.13
NCK1-208ENST00000482071 USP21Q9UK80 565 aa7.98□□□□□ -1.13
NCK1-208ENST00000482071 USP16Q9Y5T5 823 aa7.98□□□□□ -1.13
NCK1-208ENST00000482071 NHSQ6T4R5 1651 aa7.98□□□□□ -1.13
NCK1-208ENST00000482071 COL5A3P25940 1745 aaPredicted RBP7.98□□□□□ -1.13
NCK1-208ENST00000482071 ADCY9O60503 1353 aa7.97□□□□□ -1.13
NCK1-208ENST00000482071 ARFGEF2Q9Y6D5 1785 aa7.97□□□□□ -1.13
NCK1-208ENST00000482071 ZIC2O95409 532 aaPredicted RBP7.97□□□□□ -1.13
NCK1-208ENST00000482071 VSIG8P0DPA2 414 aa7.97□□□□□ -1.13
NCK1-208ENST00000482071 ARID5BQ14865 1188 aa7.97□□□□□ -1.13
NCK1-208ENST00000482071 SMC5Q8IY18 1101 aa7.97□□□□□ -1.13
NCK1-208ENST00000482071 GJD4Q96KN9 370 aaPredicted RBP7.97□□□□□ -1.13
NCK1-208ENST00000482071 C8orf37Q96NL8 207 aa7.97□□□□□ -1.13
NCK1-208ENST00000482071 SLC4A9Q96Q91 983 aa7.97□□□□□ -1.13
NCK1-208ENST00000482071 TEX13AQ9BXU3 409 aaPredicted RBP7.97□□□□□ -1.13
NCK1-208ENST00000482071 USP35Q9P2H5 1018 aa7.97□□□□□ -1.13
NCK1-208ENST00000482071 LY75O60449 1722 aa7.97□□□□□ -1.13
NCK1-208ENST00000482071 UTYO14607 1347 aa7.97□□□□□ -1.13
NCK1-208ENST00000482071 AGERQ15109 404 aa7.96□□□□□ -1.14
NCK1-208ENST00000482071 PROSER3Q2NL68 480 aa7.96□□□□□ -1.14
NCK1-208ENST00000482071 BEND3Q5T5X7 828 aa7.96□□□□□ -1.14
NCK1-208ENST00000482071 NBPF14Q5TI25 921 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms