RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 USP17L1Q7RTZ2 530 aa23.49■■□□□ 1.35
HSPG2-210ENST00000481644 DNAJC5GQ8N7S2 189 aa23.49■■□□□ 1.35
HSPG2-210ENST00000481644 TRPM4Q8TD43 1214 aa23.49■■□□□ 1.35
HSPG2-210ENST00000481644 ZNF646O15015 1829 aaPredicted RBP23.48■■□□□ 1.35
HSPG2-210ENST00000481644 TRIM27P14373 513 aa23.48■■□□□ 1.35
HSPG2-210ENST00000481644 INTS3Q68E01 1043 aaKnown RBP23.48■■□□□ 1.35
HSPG2-210ENST00000481644 ATF7IPQ6VMQ6 1270 aa23.48■■□□□ 1.35
HSPG2-210ENST00000481644 PUS3Q9BZE2 481 aaKnown RBP23.48■■□□□ 1.35
HSPG2-210ENST00000481644 ZNF609O15014 1411 aa23.48■■□□□ 1.35
HSPG2-210ENST00000481644 SAMD7Q7Z3H4 446 aa23.47■■□□□ 1.35
HSPG2-210ENST00000481644 AGBL3Q8NEM8 1001 aa23.47■■□□□ 1.35
HSPG2-210ENST00000481644 FBXW7Q969H0 707 aa23.47■■□□□ 1.35
HSPG2-210ENST00000481644 HDAC5Q9UQL6 1122 aa23.47■■□□□ 1.35
HSPG2-210ENST00000481644 HIRAP54198 1017 aaPredicted RBP23.46■■□□□ 1.35
HSPG2-210ENST00000481644 TBC1D10BQ4KMP7 808 aaPredicted RBP23.46■■□□□ 1.35
HSPG2-210ENST00000481644 MROH5Q6ZUA9 1318 aa23.46■■□□□ 1.35
HSPG2-210ENST00000481644 C15orf52Q6ZUT6 534 aaKnown RBP23.46■■□□□ 1.35
HSPG2-210ENST00000481644 MEIS3Q99687 375 aa23.46■■□□□ 1.35
HSPG2-210ENST00000481644 CREBZFQ9NS37 354 aa23.46■■□□□ 1.35
HSPG2-210ENST00000481644 RIPOR2Q9Y4F9 1068 aa23.46■■□□□ 1.35
HSPG2-210ENST00000481644 IRS2Q9Y4H2 1338 aa23.46■■□□□ 1.35
HSPG2-210ENST00000481644 KLHDC4Q8TBB5 520 aa23.45■■□□□ 1.34
HSPG2-210ENST00000481644 ZC3H15Q8WU90 426 aaKnown RBP23.45■■□□□ 1.34
HSPG2-210ENST00000481644 TNNQ9UQP3 1299 aa23.45■■□□□ 1.34
HSPG2-210ENST00000481644 LRRC24Q50LG9 513 aa23.44■■□□□ 1.34
HSPG2-210ENST00000481644 RBM26Q5T8P6 1007 aaKnown RBP23.44■■□□□ 1.34
HSPG2-210ENST00000481644 STRIP1Q5VSL9 837 aa23.44■■□□□ 1.34
HSPG2-210ENST00000481644 ZKSCAN2Q63HK3 967 aa23.44■■□□□ 1.34
HSPG2-210ENST00000481644 CLUAP1Q96AJ1 413 aa23.44■■□□□ 1.34
HSPG2-210ENST00000481644 KLRG1Q96E93 195 aa23.44■■□□□ 1.34
HSPG2-210ENST00000481644 CD209Q9NNX6 404 aa23.44■■□□□ 1.34
HSPG2-210ENST00000481644 PGAP2Q9UHJ9 254 aa23.44■■□□□ 1.34
HSPG2-210ENST00000481644 LRRFIP2Q9Y608 721 aaKnown RBP23.44■■□□□ 1.34
HSPG2-210ENST00000481644 TRPM7Q96QT4 1865 aa23.43■■□□□ 1.34
HSPG2-210ENST00000481644 TMEM88BA6NKF7 163 aa23.43■■□□□ 1.34
HSPG2-210ENST00000481644 EGFRP00533 1210 aa23.43■■□□□ 1.34
HSPG2-210ENST00000481644 UBE4AQ14139 1066 aa23.43■■□□□ 1.34
HSPG2-210ENST00000481644 METTL24Q5JXM2 366 aa23.43■■□□□ 1.34
HSPG2-210ENST00000481644 DACT2Q5SW24 774 aa23.43■■□□□ 1.34
HSPG2-210ENST00000481644 ZNF804AQ7Z570 1209 aa23.43■■□□□ 1.34
HSPG2-210ENST00000481644 GMLQ99445 158 aa23.43■■□□□ 1.34
HSPG2-210ENST00000481644 GNAI3P08754 354 aa23.42■■□□□ 1.34
HSPG2-210ENST00000481644 USP17L8P0C7I0 530 aa23.42■■□□□ 1.34
HSPG2-210ENST00000481644 KIF4BQ2VIQ3 1234 aa23.42■■□□□ 1.34
HSPG2-210ENST00000481644 TTLL5Q6EMB2 1281 aa23.42■■□□□ 1.34
HSPG2-210ENST00000481644 MYO3BQ8WXR4 1341 aa23.41■■□□□ 1.34
HSPG2-210ENST00000481644 RFX5P48382 616 aaPredicted RBP23.41■■□□□ 1.34
HSPG2-210ENST00000481644 ZNF280AP59817 542 aaPredicted RBP23.41■■□□□ 1.34
HSPG2-210ENST00000481644 GTF2IP78347 998 aa23.41■■□□□ 1.34
HSPG2-210ENST00000481644 MXD3Q9BW11 206 aa23.41■■□□□ 1.34
HSPG2-210ENST00000481644 TRAF5O00463 557 aa23.4■■□□□ 1.34
HSPG2-210ENST00000481644 FMR1Q06787 632 aaKnown RBP eCLIP23.4■■□□□ 1.34
HSPG2-210ENST00000481644 GLIS2Q9BZE0 524 aaPredicted RBP23.4■■□□□ 1.34
HSPG2-210ENST00000481644 IL1R1P14778 569 aa23.39■■□□□ 1.33
HSPG2-210ENST00000481644 PTPN12Q05209 780 aaKnown RBP23.39■■□□□ 1.33
HSPG2-210ENST00000481644 POLR2AP24928 1970 aaKnown RBP23.38■■□□□ 1.33
HSPG2-210ENST00000481644 EYA2O00167 538 aa23.38■■□□□ 1.33
HSPG2-210ENST00000481644 CDC37L1Q7L3B6 337 aa23.38■■□□□ 1.33
HSPG2-210ENST00000481644 TMEM57Q8N5G2 664 aa23.38■■□□□ 1.33
HSPG2-210ENST00000481644 VGLL2Q8N8G2 317 aa23.38■■□□□ 1.33
HSPG2-210ENST00000481644 MYOZ2Q9NPC6 264 aa23.38■■□□□ 1.33
HSPG2-210ENST00000481644 PDE8BO95263 885 aa23.37■■□□□ 1.33
HSPG2-210ENST00000481644 FTSJ3Q8IY81 847 aaKnown RBP23.37■■□□□ 1.33
HSPG2-210ENST00000481644 OGFOD1Q8N543 542 aa23.37■■□□□ 1.33
HSPG2-210ENST00000481644 MKRN1Q9UHC7 482 aaKnown RBP23.37■■□□□ 1.33
HSPG2-210ENST00000481644 HIBADHP31937 336 aaKnown RBP23.36■■□□□ 1.33
HSPG2-210ENST00000481644 GYG1P46976 350 aa23.36■■□□□ 1.33
HSPG2-210ENST00000481644 DCPSQ96C86 337 aaKnown RBP23.36■■□□□ 1.33
HSPG2-210ENST00000481644 SIL1Q9H173 461 aa23.36■■□□□ 1.33
HSPG2-210ENST00000481644 USP48Q86UV5 1035 aa23.35■■□□□ 1.33
HSPG2-210ENST00000481644 KIAA0825Q8IV33 1275 aa23.35■■□□□ 1.33
HSPG2-210ENST00000481644 FAM84BQ96KN1 310 aaPredicted RBP23.35■■□□□ 1.33
HSPG2-210ENST00000481644 GGA3Q9NZ52 723 aa23.35■■□□□ 1.33
HSPG2-210ENST00000481644 FBXO3Q9UK99 471 aa23.35■■□□□ 1.33
HSPG2-210ENST00000481644 ABT1Q9ULW3 272 aaKnown RBP23.35■■□□□ 1.33
HSPG2-210ENST00000481644 CNTNAP1P78357 1384 aa23.35■■□□□ 1.33
HSPG2-210ENST00000481644 CIAO1O76071 339 aa23.34■■□□□ 1.33
HSPG2-210ENST00000481644 GNAI2P04899 355 aa23.34■■□□□ 1.33
HSPG2-210ENST00000481644 SCARF1Q14162 830 aa23.34■■□□□ 1.33
HSPG2-210ENST00000481644 PUM3Q15397 648 aaKnown RBP23.34■■□□□ 1.33
HSPG2-210ENST00000481644 KRT26Q7Z3Y9 468 aa23.34■■□□□ 1.33
HSPG2-210ENST00000481644 DZIP1LQ8IYY4 767 aaKnown RBP23.34■■□□□ 1.33
HSPG2-210ENST00000481644 JMYQ8N9B5 988 aa23.34■■□□□ 1.33
HSPG2-210ENST00000481644 ASTN2O75129 1339 aaPredicted RBP23.33■■□□□ 1.33
HSPG2-210ENST00000481644 CELF2O95319 508 aaKnown RBP23.33■■□□□ 1.33
HSPG2-210ENST00000481644 MMP14P50281 582 aa23.33■■□□□ 1.33
HSPG2-210ENST00000481644 CAVIN4Q5BKX8 364 aa23.33■■□□□ 1.33
HSPG2-210ENST00000481644 CST9Q5W186 159 aa23.33■■□□□ 1.33
HSPG2-210ENST00000481644 ATG9AQ7Z3C6 839 aa23.33■■□□□ 1.33
HSPG2-210ENST00000481644 VPS37DQ86XT2 251 aa23.33■■□□□ 1.33
HSPG2-210ENST00000481644 TDRD7Q8NHU6 1098 aaKnown RBP23.33■■□□□ 1.33
HSPG2-210ENST00000481644 ZNF408Q9H9D4 720 aa23.33■■□□□ 1.33
HSPG2-210ENST00000481644 HDAC9Q9UKV0 1011 aa23.33■■□□□ 1.33
HSPG2-210ENST00000481644 JAG2Q9Y219 1238 aa23.33■■□□□ 1.33
HSPG2-210ENST00000481644 SRGAP3O43295 1099 aa23.32■■□□□ 1.32
HSPG2-210ENST00000481644 SASH1O94885 1247 aa23.32■■□□□ 1.32
HSPG2-210ENST00000481644 IFIT1P09914 478 aaKnown RBP23.32■■□□□ 1.32
HSPG2-210ENST00000481644 CERS5Q8N5B7 392 aa23.32■■□□□ 1.32
HSPG2-210ENST00000481644 COPRSQ9NQ92 184 aa23.32■■□□□ 1.32
HSPG2-210ENST00000481644 PA2G4Q9UQ80 394 aaKnown RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms