RNA–Protein interactions for RNA: ENST00000481460.1

TRAPPC10-209, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-209ENST00000481460 TJP1Q07157 1748 aa7.2□□□□□ -1.26
TRAPPC10-209ENST00000481460 TCF20Q9UGU0 1960 aaKnown RBP7.2□□□□□ -1.26
TRAPPC10-209ENST00000481460 SOS1Q07889 1333 aaPredicted RBP7.2□□□□□ -1.26
TRAPPC10-209ENST00000481460 ZNF318Q5VUA4 2279 aa7.2□□□□□ -1.26
TRAPPC10-209ENST00000481460 TONSLQ96HA7 1378 aa7.2□□□□□ -1.26
TRAPPC10-209ENST00000481460 ACACBO00763 2458 aa7.19□□□□□ -1.26
TRAPPC10-209ENST00000481460 GMPSP49915 693 aaPredicted RBP7.19□□□□□ -1.26
TRAPPC10-209ENST00000481460 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.19□□□□□ -1.26
TRAPPC10-209ENST00000481460 EPHX3Q9H6B9 360 aa7.19□□□□□ -1.26
TRAPPC10-209ENST00000481460 FLNBO75369 2602 aaKnown RBP7.19□□□□□ -1.26
TRAPPC10-209ENST00000481460 GJB1P08034 283 aa7.18□□□□□ -1.26
TRAPPC10-209ENST00000481460 CAPN2P17655 700 aa7.18□□□□□ -1.26
TRAPPC10-209ENST00000481460 ERMP1Q7Z2K6 904 aa7.18□□□□□ -1.26
TRAPPC10-209ENST00000481460 USP38Q8NB14 1042 aa7.18□□□□□ -1.26
TRAPPC10-209ENST00000481460 KCNH6Q9H252 994 aa7.18□□□□□ -1.26
TRAPPC10-209ENST00000481460 TIMELESSQ9UNS1 1208 aa7.18□□□□□ -1.26
TRAPPC10-209ENST00000481460 NPC1L1Q9UHC9 1359 aa7.18□□□□□ -1.26
TRAPPC10-209ENST00000481460 MYO9BQ13459 2157 aa7.18□□□□□ -1.26
TRAPPC10-209ENST00000481460 RIMBP2O15034 1052 aa7.17□□□□□ -1.26
TRAPPC10-209ENST00000481460 NPR1P16066 1061 aa7.17□□□□□ -1.26
TRAPPC10-209ENST00000481460 MAGEA10P43363 369 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC10-209ENST00000481460 INHBEP58166 350 aa7.17□□□□□ -1.26
TRAPPC10-209ENST00000481460 CXCL9Q07325 125 aa7.17□□□□□ -1.26
TRAPPC10-209ENST00000481460 CC2D2BQ6DHV5 1058 aa7.17□□□□□ -1.26
TRAPPC10-209ENST00000481460 ZNF710Q8N1W2 664 aa7.17□□□□□ -1.26
TRAPPC10-209ENST00000481460 USHBP1Q8N6Y0 703 aa7.17□□□□□ -1.26
TRAPPC10-209ENST00000481460 MYLIPQ8WY64 445 aa7.17□□□□□ -1.26
TRAPPC10-209ENST00000481460 YTHDC1Q96MU7 727 aaKnown RBP7.17□□□□□ -1.26
TRAPPC10-209ENST00000481460 KTN1Q86UP2 1357 aaKnown RBP7.17□□□□□ -1.26
TRAPPC10-209ENST00000481460 RIF1Q5UIP0 2472 aaKnown RBP7.17□□□□□ -1.26
TRAPPC10-209ENST00000481460 ERVV-2B6SEH9 535 aa7.16□□□□□ -1.26
TRAPPC10-209ENST00000481460 ADM5C9JUS6 153 aa7.16□□□□□ -1.26
TRAPPC10-209ENST00000481460 NUDT7P0C024 238 aa7.16□□□□□ -1.26
TRAPPC10-209ENST00000481460 HOXB1P14653 301 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC10-209ENST00000481460 FOSL2P15408 326 aa7.16□□□□□ -1.26
TRAPPC10-209ENST00000481460 ITGB8P26012 769 aa7.16□□□□□ -1.26
TRAPPC10-209ENST00000481460 RBM10P98175 930 aaKnown RBP7.16□□□□□ -1.26
TRAPPC10-209ENST00000481460 SP3Q02447 781 aa7.16□□□□□ -1.26
TRAPPC10-209ENST00000481460 GRIPAP1Q4V328 841 aa7.16□□□□□ -1.26
TRAPPC10-209ENST00000481460 NME9Q86XW9 330 aa7.16□□□□□ -1.26
TRAPPC10-209ENST00000481460 LARGE2Q8N3Y3 721 aa7.16□□□□□ -1.26
TRAPPC10-209ENST00000481460 STAC3Q96MF2 364 aa7.16□□□□□ -1.26
TRAPPC10-209ENST00000481460 UBE2OQ9C0C9 1292 aaKnown RBP7.16□□□□□ -1.26
TRAPPC10-209ENST00000481460 VPS33BQ9H267 617 aa7.16□□□□□ -1.26
TRAPPC10-209ENST00000481460 CNOT7Q9UIV1 285 aaKnown RBP7.16□□□□□ -1.26
TRAPPC10-209ENST00000481460 RAB3GAP2Q9H2M9 1393 aa7.16□□□□□ -1.26
TRAPPC10-209ENST00000481460 FAM208BQ5VWN6 2430 aa7.16□□□□□ -1.26
TRAPPC10-209ENST00000481460 NAV2Q8IVL1 2488 aa7.15□□□□□ -1.26
TRAPPC10-209ENST00000481460 FARP2O94887 1054 aaPredicted RBP7.15□□□□□ -1.26
TRAPPC10-209ENST00000481460 MRPS5P82675 430 aaKnown RBP7.15□□□□□ -1.26
TRAPPC10-209ENST00000481460 ARHGEF6Q15052 776 aa7.15□□□□□ -1.26
TRAPPC10-209ENST00000481460 MTFR1Q15390 333 aa7.15□□□□□ -1.26
TRAPPC10-209ENST00000481460 SH3TC2Q8TF17 1288 aa7.15□□□□□ -1.26
TRAPPC10-209ENST00000481460 DDX12PQ92771 950 aa7.15□□□□□ -1.26
TRAPPC10-209ENST00000481460 DCPSQ96C86 337 aaKnown RBP7.15□□□□□ -1.26
TRAPPC10-209ENST00000481460 CDCA5Q96FF9 252 aa7.15□□□□□ -1.26
TRAPPC10-209ENST00000481460 SBNO2Q9Y2G9 1366 aa7.15□□□□□ -1.26
TRAPPC10-209ENST00000481460 LAMB2P55268 1798 aa7.15□□□□□ -1.27
TRAPPC10-209ENST00000481460 ZFHX2Q9C0A1 2572 aaPredicted RBP7.14□□□□□ -1.27
TRAPPC10-209ENST00000481460 H7C1D1 291 aa7.14□□□□□ -1.27
TRAPPC10-209ENST00000481460 SMIM22K7EJ46 135 aa7.14□□□□□ -1.27
TRAPPC10-209ENST00000481460 MYCP01106 439 aaPredicted RBP7.14□□□□□ -1.27
TRAPPC10-209ENST00000481460 OSBPP22059 807 aa7.14□□□□□ -1.27
TRAPPC10-209ENST00000481460 BRD2P25440 801 aaKnown RBP7.14□□□□□ -1.27
TRAPPC10-209ENST00000481460 COL15A1P39059 1388 aa7.14□□□□□ -1.27
TRAPPC10-209ENST00000481460 COL9A2Q14055 689 aaPredicted RBP7.14□□□□□ -1.27
TRAPPC10-209ENST00000481460 NCAPD2Q15021 1401 aa7.14□□□□□ -1.27
TRAPPC10-209ENST00000481460 KIF24Q5T7B8 1368 aa7.14□□□□□ -1.27
TRAPPC10-209ENST00000481460 TBC1D9BQ66K14 1250 aa7.14□□□□□ -1.27
TRAPPC10-209ENST00000481460 NIM1KQ8IY84 436 aa7.14□□□□□ -1.27
TRAPPC10-209ENST00000481460 TTYH1Q9H313 450 aaPredicted RBP7.14□□□□□ -1.27
TRAPPC10-209ENST00000481460 SPG7Q9UQ90 795 aa7.14□□□□□ -1.27
TRAPPC10-209ENST00000481460 FAM186AA6NE01 2351 aa7.13□□□□□ -1.27
TRAPPC10-209ENST00000481460 TAF1P21675 1872 aa7.13□□□□□ -1.27
TRAPPC10-209ENST00000481460 RTL1A6NKG5 1358 aa7.13□□□□□ -1.27
TRAPPC10-209ENST00000481460 FAM205AQ6ZU69 1335 aa7.13□□□□□ -1.27
TRAPPC10-209ENST00000481460 GRXCR2A6NFK2 248 aa7.13□□□□□ -1.27
TRAPPC10-209ENST00000481460 PHKG2P15735 406 aa7.13□□□□□ -1.27
TRAPPC10-209ENST00000481460 SMYD5Q6GMV2 418 aa7.13□□□□□ -1.27
TRAPPC10-209ENST00000481460 DPF2Q92785 391 aa7.13□□□□□ -1.27
TRAPPC10-209ENST00000481460 ZNRF3Q9ULT6 936 aa7.13□□□□□ -1.27
TRAPPC10-209ENST00000481460 NCOR2Q9Y618 2525 aa7.12□□□□□ -1.27
TRAPPC10-209ENST00000481460 COL3A1P02461 1466 aaPredicted RBP7.12□□□□□ -1.27
TRAPPC10-209ENST00000481460 A0A1W2PP64 1363 aa7.12□□□□□ -1.27
TRAPPC10-209ENST00000481460 SHTN1A0MZ66 631 aa7.12□□□□□ -1.27
TRAPPC10-209ENST00000481460 BMP1P13497 986 aa7.12□□□□□ -1.27
TRAPPC10-209ENST00000481460 ALDH1B1P30837 517 aa7.12□□□□□ -1.27
TRAPPC10-209ENST00000481460 CRHR2Q13324 411 aa7.12□□□□□ -1.27
TRAPPC10-209ENST00000481460 RBM26Q5T8P6 1007 aaKnown RBP7.12□□□□□ -1.27
TRAPPC10-209ENST00000481460 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.12□□□□□ -1.27
TRAPPC10-209ENST00000481460 IFNL2Q8IZJ0 200 aa7.12□□□□□ -1.27
TRAPPC10-209ENST00000481460 CNBD1Q8NA66 436 aa7.12□□□□□ -1.27
TRAPPC10-209ENST00000481460 THEGQ9P2T0 379 aa7.12□□□□□ -1.27
TRAPPC10-209ENST00000481460 DACH1Q9UI36 760 aa7.12□□□□□ -1.27
TRAPPC10-209ENST00000481460 PCDHGA10Q9Y5H3 936 aa7.12□□□□□ -1.27
TRAPPC10-209ENST00000481460 CACNA1HO95180 2353 aa7.11□□□□□ -1.27
TRAPPC10-209ENST00000481460 WASHC2AQ641Q2 1341 aa7.11□□□□□ -1.27
TRAPPC10-209ENST00000481460 MANSC4A6NHS7 340 aaPredicted RBP7.11□□□□□ -1.27
TRAPPC10-209ENST00000481460 UBE2Q2LH0YL09 131 aa7.11□□□□□ -1.27
TRAPPC10-209ENST00000481460 IGF2BP3O00425 579 aaKnown RBP eCLIP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms