RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 F8W031 263 aaPredicted RBP10.83□□□□□ -0.68
GARNL3-216ENST00000481242 KIF4AO95239 1232 aa10.83□□□□□ -0.68
GARNL3-216ENST00000481242 HIBADHP31937 336 aaKnown RBP10.83□□□□□ -0.68
GARNL3-216ENST00000481242 NAPAP54920 295 aa10.83□□□□□ -0.68
GARNL3-216ENST00000481242 IQSEC3Q9UPP2 1182 aaPredicted RBP10.83□□□□□ -0.68
GARNL3-216ENST00000481242 SYCE3A1L190 88 aa10.83□□□□□ -0.68
GARNL3-216ENST00000481242 TBC1D22AQ8WUA7 517 aa10.83□□□□□ -0.68
GARNL3-216ENST00000481242 SNX21Q969T3 373 aa10.83□□□□□ -0.68
GARNL3-216ENST00000481242 FERMT2Q96AC1 680 aa10.83□□□□□ -0.68
GARNL3-216ENST00000481242 TIGD1Q96MW7 591 aa10.83□□□□□ -0.68
GARNL3-216ENST00000481242 RBM28Q9NW13 759 aaKnown RBP10.83□□□□□ -0.68
GARNL3-216ENST00000481242 ANKRD62A6NC57 917 aa10.83□□□□□ -0.68
GARNL3-216ENST00000481242 ALDH1B1P30837 517 aa10.83□□□□□ -0.68
GARNL3-216ENST00000481242 PAFAH1B1P43034 410 aa10.83□□□□□ -0.68
GARNL3-216ENST00000481242 PICALMQ13492 652 aa10.83□□□□□ -0.68
GARNL3-216ENST00000481242 CWF19L2Q2TBE0 894 aaKnown RBP10.83□□□□□ -0.68
GARNL3-216ENST00000481242 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.83□□□□□ -0.68
GARNL3-216ENST00000481242 TRIM75PA6NK02 468 aa10.82□□□□□ -0.68
GARNL3-216ENST00000481242 PRC1O43663 620 aa10.82□□□□□ -0.68
GARNL3-216ENST00000481242 TCERG1LQ5VWI1 586 aa10.82□□□□□ -0.68
GARNL3-216ENST00000481242 DRC1Q96MC2 740 aa10.82□□□□□ -0.68
GARNL3-216ENST00000481242 EXOC1Q9NV70 894 aa10.82□□□□□ -0.68
GARNL3-216ENST00000481242 PCDHB15Q9Y5E8 787 aa10.82□□□□□ -0.68
GARNL3-216ENST00000481242 CAMK4Q16566 473 aa10.82□□□□□ -0.68
GARNL3-216ENST00000481242 KLHL40Q2TBA0 621 aa10.82□□□□□ -0.68
GARNL3-216ENST00000481242 CKAP2LQ8IYA6 745 aa10.82□□□□□ -0.68
GARNL3-216ENST00000481242 RTL1A6NKG5 1358 aa10.82□□□□□ -0.68
GARNL3-216ENST00000481242 EIF6P56537 245 aaKnown RBP10.82□□□□□ -0.68
GARNL3-216ENST00000481242 TDRD12Q587J7 1177 aaKnown RBP10.82□□□□□ -0.68
GARNL3-216ENST00000481242 SMC5Q8IY18 1101 aa10.82□□□□□ -0.68
GARNL3-216ENST00000481242 PPP2R5BQ15173 497 aa10.82□□□□□ -0.68
GARNL3-216ENST00000481242 CTAGE1Q96RT6 745 aa10.82□□□□□ -0.68
GARNL3-216ENST00000481242 PLVAPQ9BX97 442 aa10.82□□□□□ -0.68
GARNL3-216ENST00000481242 ZBTB40Q9NUA8 1239 aa10.82□□□□□ -0.68
GARNL3-216ENST00000481242 AOX1Q06278 1338 aa10.81□□□□□ -0.68
GARNL3-216ENST00000481242 MYCNP04198 464 aaPredicted RBP10.81□□□□□ -0.68
GARNL3-216ENST00000481242 SYKP43405 635 aa10.81□□□□□ -0.68
GARNL3-216ENST00000481242 IFI16Q16666 785 aaKnown RBP10.81□□□□□ -0.68
GARNL3-216ENST00000481242 DHX32Q7L7V1 743 aaKnown RBP10.81□□□□□ -0.68
GARNL3-216ENST00000481242 HEATR3Q7Z4Q2 680 aa10.81□□□□□ -0.68
GARNL3-216ENST00000481242 CCDC144CPQ8IYA2 1237 aa10.81□□□□□ -0.68
GARNL3-216ENST00000481242 UBXN4Q92575 508 aa10.81□□□□□ -0.68
GARNL3-216ENST00000481242 CCDC171Q6TFL3 1326 aa10.81□□□□□ -0.68
GARNL3-216ENST00000481242 GOLGA6L7A0A1B0GV03 622 aa10.81□□□□□ -0.68
GARNL3-216ENST00000481242 UFL1O94874 794 aa10.81□□□□□ -0.68
GARNL3-216ENST00000481242 ZSCAN22P10073 491 aaPredicted RBP10.81□□□□□ -0.68
GARNL3-216ENST00000481242 PRIM1P49642 420 aaKnown RBP10.81□□□□□ -0.68
GARNL3-216ENST00000481242 KRT79Q5XKE5 535 aa10.81□□□□□ -0.68
GARNL3-216ENST00000481242 ATL3Q6DD88 541 aa10.81□□□□□ -0.68
GARNL3-216ENST00000481242 TMX3Q96JJ7 454 aa10.81□□□□□ -0.68
GARNL3-216ENST00000481242 ARHGEF5Q12774 1597 aa10.81□□□□□ -0.68
GARNL3-216ENST00000481242 IBSPP21815 317 aaPredicted RBP10.81□□□□□ -0.68
GARNL3-216ENST00000481242 MAP9Q49MG5 647 aa10.81□□□□□ -0.68
GARNL3-216ENST00000481242 APBB1IPQ7Z5R6 666 aaPredicted RBP10.81□□□□□ -0.68
GARNL3-216ENST00000481242 MAGEB6Q8N7X4 407 aa10.81□□□□□ -0.68
GARNL3-216ENST00000481242 NUP88Q99567 741 aaPredicted RBP10.81□□□□□ -0.68
GARNL3-216ENST00000481242 H0YHG0 523 aa10.81□□□□□ -0.68
GARNL3-216ENST00000481242 KRT13P13646 458 aa10.81□□□□□ -0.68
GARNL3-216ENST00000481242 UVSSAQ2YD98 709 aa10.81□□□□□ -0.68
GARNL3-216ENST00000481242 LEKR1Q6ZMV7 388 aa10.81□□□□□ -0.68
GARNL3-216ENST00000481242 TEX11Q8IYF3 940 aa10.81□□□□□ -0.68
GARNL3-216ENST00000481242 BCCIPQ9P287 314 aaKnown RBP eCLIP10.81□□□□□ -0.68
GARNL3-216ENST00000481242 PA2G4Q9UQ80 394 aaKnown RBP10.81□□□□□ -0.68
GARNL3-216ENST00000481242 PLXNC1O60486 1568 aa10.8□□□□□ -0.68
GARNL3-216ENST00000481242 PSMA7O14818 248 aa10.8□□□□□ -0.68
GARNL3-216ENST00000481242 ITGA6P23229 1130 aa10.8□□□□□ -0.68
GARNL3-216ENST00000481242 SSFA2P28290 1259 aa10.8□□□□□ -0.68
GARNL3-216ENST00000481242 TFCP2Q12800 502 aa10.8□□□□□ -0.68
GARNL3-216ENST00000481242 NMIQ13287 307 aaPredicted RBP10.8□□□□□ -0.68
GARNL3-216ENST00000481242 FAM98CQ17RN3 349 aaKnown RBP10.8□□□□□ -0.68
GARNL3-216ENST00000481242 SKAP1Q86WV1 359 aa10.8□□□□□ -0.68
GARNL3-216ENST00000481242 EHBP1Q8NDI1 1231 aa10.8□□□□□ -0.68
GARNL3-216ENST00000481242 LPIN2Q92539 896 aa10.8□□□□□ -0.68
GARNL3-216ENST00000481242 ALS2CR12Q96Q35 445 aa10.8□□□□□ -0.68
GARNL3-216ENST00000481242 TAOK3Q9H2K8 898 aa10.8□□□□□ -0.68
GARNL3-216ENST00000481242 BICC1Q9H694 974 aaKnown RBP10.8□□□□□ -0.68
GARNL3-216ENST00000481242 PLEKHG1Q9ULL1 1385 aa10.8□□□□□ -0.68
GARNL3-216ENST00000481242 BRAPQ7Z569 592 aa10.8□□□□□ -0.68
GARNL3-216ENST00000481242 BICD1Q96G01 975 aa10.8□□□□□ -0.68
GARNL3-216ENST00000481242 TMEM87BQ96K49 555 aa10.8□□□□□ -0.68
GARNL3-216ENST00000481242 TFIP11Q9UBB9 837 aaKnown RBP10.8□□□□□ -0.68
GARNL3-216ENST00000481242 KIAA0232Q92628 1395 aa10.8□□□□□ -0.68
GARNL3-216ENST00000481242 STAT6P42226 847 aa10.8□□□□□ -0.68
GARNL3-216ENST00000481242 PTPN14Q15678 1187 aa10.8□□□□□ -0.68
GARNL3-216ENST00000481242 BRDTQ58F21 947 aaPredicted RBP10.8□□□□□ -0.68
GARNL3-216ENST00000481242 FMNL3Q8IVF7 1028 aa10.8□□□□□ -0.68
GARNL3-216ENST00000481242 FAM177A1Q8N128 213 aaPredicted RBP10.8□□□□□ -0.68
GARNL3-216ENST00000481242 TSPYL6Q8N831 410 aa10.8□□□□□ -0.68
GARNL3-216ENST00000481242 ARHGEF10LQ9HCE6 1279 aa10.8□□□□□ -0.68
GARNL3-216ENST00000481242 MROH5Q6ZUA9 1318 aa10.8□□□□□ -0.68
GARNL3-216ENST00000481242 YEATS2Q9ULM3 1422 aa10.8□□□□□ -0.68
GARNL3-216ENST00000481242 DPP8Q6V1X1 898 aaPredicted RBP10.79□□□□□ -0.68
GARNL3-216ENST00000481242 KIF18AQ8NI77 898 aa10.79□□□□□ -0.68
GARNL3-216ENST00000481242 NAA15Q9BXJ9 866 aaKnown RBP10.79□□□□□ -0.68
GARNL3-216ENST00000481242 IMPG2Q9BZV3 1241 aa10.79□□□□□ -0.68
GARNL3-216ENST00000481242 PPP1R2P41236 205 aa10.79□□□□□ -0.68
GARNL3-216ENST00000481242 ZNF165P49910 485 aa10.79□□□□□ -0.68
GARNL3-216ENST00000481242 Q6ZUG5 572 aa10.79□□□□□ -0.68
GARNL3-216ENST00000481242 HOOK3Q86VS8 718 aa10.79□□□□□ -0.68
GARNL3-216ENST00000481242 MRPS27Q92552 414 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms