RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 CCDC146Q8IYE0 955 aa12.3□□□□□ -0.44
SMARCE1-210ENST00000481231 MXD3Q9BW11 206 aa12.3□□□□□ -0.44
SMARCE1-210ENST00000481231 ANGEL1Q9UNK9 670 aaKnown RBP12.3□□□□□ -0.44
SMARCE1-210ENST00000481231 PTCH2Q9Y6C5 1203 aa12.3□□□□□ -0.44
SMARCE1-210ENST00000481231 LAMA3Q16787 3333 aa12.3□□□□□ -0.44
SMARCE1-210ENST00000481231 SASH1O94885 1247 aa12.29□□□□□ -0.44
SMARCE1-210ENST00000481231 NEUROD2Q15784 382 aa12.29□□□□□ -0.44
SMARCE1-210ENST00000481231 SLC9C1Q4G0N8 1177 aa12.29□□□□□ -0.44
SMARCE1-210ENST00000481231 RTL5Q5HYW3 569 aaPredicted RBP12.29□□□□□ -0.44
SMARCE1-210ENST00000481231 CLMNQ96JQ2 1002 aa12.29□□□□□ -0.44
SMARCE1-210ENST00000481231 CHPF2Q9P2E5 772 aa12.29□□□□□ -0.44
SMARCE1-210ENST00000481231 SOX1O00570 391 aaPredicted RBP12.28□□□□□ -0.44
SMARCE1-210ENST00000481231 WNT10BO00744 389 aa12.28□□□□□ -0.44
SMARCE1-210ENST00000481231 MNX1P50219 401 aaPredicted RBP12.28□□□□□ -0.44
SMARCE1-210ENST00000481231 SP3Q02447 781 aa12.28□□□□□ -0.44
SMARCE1-210ENST00000481231 SF3B3Q15393 1217 aaKnown RBP12.28□□□□□ -0.44
SMARCE1-210ENST00000481231 FAM89AQ96GI7 184 aa12.28□□□□□ -0.44
SMARCE1-210ENST00000481231 ANKIB1Q9P2G1 1089 aa12.28□□□□□ -0.44
SMARCE1-210ENST00000481231 GGA1Q9UJY5 639 aa12.28□□□□□ -0.44
SMARCE1-210ENST00000481231 TRIM35Q9UPQ4 493 aa12.28□□□□□ -0.44
SMARCE1-210ENST00000481231 USP17L3A6NCW0 530 aa12.27□□□□□ -0.45
SMARCE1-210ENST00000481231 USP17L4A6NCW7 530 aa12.27□□□□□ -0.45
SMARCE1-210ENST00000481231 WTIPA6NIX2 430 aaPredicted RBP12.27□□□□□ -0.45
SMARCE1-210ENST00000481231 INHBEP58166 350 aa12.27□□□□□ -0.45
SMARCE1-210ENST00000481231 HDGFL1Q5TGJ6 251 aa12.27□□□□□ -0.45
SMARCE1-210ENST00000481231 USP17L1Q7RTZ2 530 aa12.27□□□□□ -0.45
SMARCE1-210ENST00000481231 SH3TC2Q8TF17 1288 aa12.27□□□□□ -0.45
SMARCE1-210ENST00000481231 DPF3Q92784 378 aa12.27□□□□□ -0.45
SMARCE1-210ENST00000481231 SLC10A4Q96EP9 437 aa12.27□□□□□ -0.45
SMARCE1-210ENST00000481231 LRCH3Q96II8 777 aa12.27□□□□□ -0.45
SMARCE1-210ENST00000481231 WNK4Q96J92 1243 aa12.27□□□□□ -0.45
SMARCE1-210ENST00000481231 PRO3102Q9H379 93 aa12.27□□□□□ -0.45
SMARCE1-210ENST00000481231 PODXL2Q9NZ53 605 aa12.27□□□□□ -0.45
SMARCE1-210ENST00000481231 LAS1LQ9Y4W2 734 aaKnown RBP12.27□□□□□ -0.45
SMARCE1-210ENST00000481231 MYBBP1AQ9BQG0 1328 aaKnown RBP12.27□□□□□ -0.45
SMARCE1-210ENST00000481231 SSC5DA1L4H1 1573 aa12.26□□□□□ -0.45
SMARCE1-210ENST00000481231 RPS8P62241 208 aaKnown RBP12.26□□□□□ -0.45
SMARCE1-210ENST00000481231 PLBD2Q8NHP8 589 aa12.26□□□□□ -0.45
SMARCE1-210ENST00000481231 RUNDC1Q96C34 613 aa12.26□□□□□ -0.45
SMARCE1-210ENST00000481231 SHISA4Q96DD7 197 aa12.26□□□□□ -0.45
SMARCE1-210ENST00000481231 SEC31BQ9NQW1 1179 aa12.26□□□□□ -0.45
SMARCE1-210ENST00000481231 ATP5J2-PTCD1G3V325 749 aa12.25□□□□□ -0.45
SMARCE1-210ENST00000481231 HOXB7P09629 217 aa12.25□□□□□ -0.45
SMARCE1-210ENST00000481231 ZBTB48P10074 688 aaPredicted RBP12.25□□□□□ -0.45
SMARCE1-210ENST00000481231 GJA5P36382 358 aa12.25□□□□□ -0.45
SMARCE1-210ENST00000481231 DDX10Q13206 875 aaKnown RBP12.25□□□□□ -0.45
SMARCE1-210ENST00000481231 NBPF11Q86T75 865 aa12.25□□□□□ -0.45
SMARCE1-210ENST00000481231 FBXW7Q969H0 707 aa12.25□□□□□ -0.45
SMARCE1-210ENST00000481231 PTPN18Q99952 460 aa12.25□□□□□ -0.45
SMARCE1-210ENST00000481231 ISCA1Q9BUE6 129 aa12.25□□□□□ -0.45
SMARCE1-210ENST00000481231 PSME4Q14997 1843 aa12.25□□□□□ -0.45
SMARCE1-210ENST00000481231 WDR43Q15061 677 aaKnown RBP eCLIP12.24□□□□□ -0.45
SMARCE1-210ENST00000481231 ANKRD13DQ6ZTN6 518 aa12.24□□□□□ -0.45
SMARCE1-210ENST00000481231 UNC80Q8N2C7 3258 aa12.24□□□□□ -0.45
SMARCE1-210ENST00000481231 IRS4O14654 1257 aaPredicted RBP12.23□□□□□ -0.45
SMARCE1-210ENST00000481231 DACT2Q5SW24 774 aa12.23□□□□□ -0.45
SMARCE1-210ENST00000481231 DUSP27Q5VZP5 1158 aa12.23□□□□□ -0.45
SMARCE1-210ENST00000481231 APOBEC3FQ8IUX4 373 aaKnown RBP12.23□□□□□ -0.45
SMARCE1-210ENST00000481231 OGFOD1Q8N543 542 aa12.23□□□□□ -0.45
SMARCE1-210ENST00000481231 DBF4Q9UBU7 674 aaPredicted RBP12.23□□□□□ -0.45
SMARCE1-210ENST00000481231 ADAMTS8Q9UP79 889 aa12.23□□□□□ -0.45
SMARCE1-210ENST00000481231 TRIM28Q13263 835 aaKnown RBP12.22□□□□□ -0.45
SMARCE1-210ENST00000481231 OTUD7BQ6GQQ9 843 aa12.22□□□□□ -0.45
SMARCE1-210ENST00000481231 PODNQ7Z5L7 613 aa12.22□□□□□ -0.45
SMARCE1-210ENST00000481231 COL25A1Q9BXS0 654 aaPredicted RBP12.22□□□□□ -0.45
SMARCE1-210ENST00000481231 ARHGAP39Q9C0H5 1083 aa12.22□□□□□ -0.45
SMARCE1-210ENST00000481231 MBIPQ9NS73 344 aa12.22□□□□□ -0.45
SMARCE1-210ENST00000481231 HYPKQ9NX55 129 aa12.22□□□□□ -0.45
SMARCE1-210ENST00000481231 LAMB1P07942 1786 aa12.21□□□□□ -0.45
SMARCE1-210ENST00000481231 XDHP47989 1333 aa12.21□□□□□ -0.45
SMARCE1-210ENST00000481231 MTFR1Q15390 333 aa12.21□□□□□ -0.45
SMARCE1-210ENST00000481231 MAP3K11Q16584 847 aa12.21□□□□□ -0.45
SMARCE1-210ENST00000481231 CCDC85AQ96PX6 553 aaPredicted RBP12.21□□□□□ -0.45
SMARCE1-210ENST00000481231 DEFB129Q9H1M3 183 aa12.21□□□□□ -0.45
SMARCE1-210ENST00000481231 ZSWIM8A7E2V4 1837 aa12.21□□□□□ -0.46
SMARCE1-210ENST00000481231 ZNF646O15015 1829 aaPredicted RBP12.21□□□□□ -0.46
SMARCE1-210ENST00000481231 ECM2O94769 699 aaPredicted RBP12.2□□□□□ -0.46
SMARCE1-210ENST00000481231 ZNF853P0CG23 659 aa12.2□□□□□ -0.46
SMARCE1-210ENST00000481231 KIAA0825Q8IV33 1275 aa12.2□□□□□ -0.46
SMARCE1-210ENST00000481231 COL1A1P02452 1464 aaPredicted RBP12.2□□□□□ -0.46
SMARCE1-210ENST00000481231 TESPA1A2RU30 521 aaPredicted RBP12.19□□□□□ -0.46
SMARCE1-210ENST00000481231 PPP1R12BO60237 982 aaPredicted RBP12.19□□□□□ -0.46
SMARCE1-210ENST00000481231 GOLGA2Q08379 1002 aa12.19□□□□□ -0.46
SMARCE1-210ENST00000481231 TAF1CQ15572 869 aaPredicted RBP12.19□□□□□ -0.46
SMARCE1-210ENST00000481231 Q7L0L9 218 aa12.19□□□□□ -0.46
SMARCE1-210ENST00000481231 ZBED3Q96IU2 234 aaPredicted RBP12.19□□□□□ -0.46
SMARCE1-210ENST00000481231 MYO3BQ8WXR4 1341 aa12.18□□□□□ -0.46
SMARCE1-210ENST00000481231 ZBTB7BO15156 539 aaPredicted RBP12.18□□□□□ -0.46
SMARCE1-210ENST00000481231 ATP2B4P23634 1241 aa12.18□□□□□ -0.46
SMARCE1-210ENST00000481231 ARHGEF6Q15052 776 aa12.18□□□□□ -0.46
SMARCE1-210ENST00000481231 STRIP1Q5VSL9 837 aa12.18□□□□□ -0.46
SMARCE1-210ENST00000481231 RIC3Q7Z5B4 369 aa12.18□□□□□ -0.46
SMARCE1-210ENST00000481231 UBE2Q1Q7Z7E8 422 aa12.18□□□□□ -0.46
SMARCE1-210ENST00000481231 ZBTB38Q8NAP3 1195 aaPredicted RBP12.18□□□□□ -0.46
SMARCE1-210ENST00000481231 CNKSR2Q8WXI2 1034 aa12.18□□□□□ -0.46
SMARCE1-210ENST00000481231 BRI3BPQ8WY22 251 aa12.18□□□□□ -0.46
SMARCE1-210ENST00000481231 HTATIP2Q9BUP3 242 aa12.18□□□□□ -0.46
SMARCE1-210ENST00000481231 PHAXQ9H814 394 aaKnown RBP12.18□□□□□ -0.46
SMARCE1-210ENST00000481231 ELP3Q9H9T3 547 aa12.18□□□□□ -0.46
SMARCE1-210ENST00000481231 IFT57Q9NWB7 429 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 580.6 ms