RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 PASKQ96RG2 1323 aa25.26■■□□□ 1.63
VPS36-204ENST00000480923 TRIM27P14373 513 aa25.25■■□□□ 1.63
VPS36-204ENST00000480923 INTS3Q68E01 1043 aaKnown RBP25.25■■□□□ 1.63
VPS36-204ENST00000480923 HDAC5Q9UQL6 1122 aa25.25■■□□□ 1.63
VPS36-204ENST00000480923 HIRAP54198 1017 aaPredicted RBP25.24■■□□□ 1.63
VPS36-204ENST00000480923 SAMD7Q7Z3H4 446 aa25.24■■□□□ 1.63
VPS36-204ENST00000480923 DNAJC5GQ8N7S2 189 aa25.24■■□□□ 1.63
VPS36-204ENST00000480923 AGBL3Q8NEM8 1001 aa25.24■■□□□ 1.63
VPS36-204ENST00000480923 TNNQ9UQP3 1299 aa25.24■■□□□ 1.63
VPS36-204ENST00000480923 CEP350Q5VT06 3117 aa25.24■■□□□ 1.63
VPS36-204ENST00000480923 MROH5Q6ZUA9 1318 aa25.23■■□□□ 1.63
VPS36-204ENST00000480923 TBC1D10BQ4KMP7 808 aaPredicted RBP25.23■■□□□ 1.63
VPS36-204ENST00000480923 RBM26Q5T8P6 1007 aaKnown RBP25.23■■□□□ 1.63
VPS36-204ENST00000480923 ZKSCAN2Q63HK3 967 aa25.23■■□□□ 1.63
VPS36-204ENST00000480923 CLUAP1Q96AJ1 413 aa25.23■■□□□ 1.63
VPS36-204ENST00000480923 MEIS3Q99687 375 aa25.23■■□□□ 1.63
VPS36-204ENST00000480923 RIPOR2Q9Y4F9 1068 aa25.23■■□□□ 1.63
VPS36-204ENST00000480923 SCN9AQ15858 1988 aa25.23■■□□□ 1.63
VPS36-204ENST00000480923 LRRC24Q50LG9 513 aa25.22■■□□□ 1.63
VPS36-204ENST00000480923 C15orf52Q6ZUT6 534 aaKnown RBP25.22■■□□□ 1.63
VPS36-204ENST00000480923 KLHDC4Q8TBB5 520 aa25.22■■□□□ 1.63
VPS36-204ENST00000480923 CREBZFQ9NS37 354 aa25.22■■□□□ 1.63
VPS36-204ENST00000480923 LRRFIP2Q9Y608 721 aaKnown RBP25.22■■□□□ 1.63
VPS36-204ENST00000480923 ZNF804AQ7Z570 1209 aa25.21■■□□□ 1.63
VPS36-204ENST00000480923 ZC3H15Q8WU90 426 aaKnown RBP25.21■■□□□ 1.63
VPS36-204ENST00000480923 KLRG1Q96E93 195 aa25.21■■□□□ 1.63
VPS36-204ENST00000480923 CD209Q9NNX6 404 aa25.21■■□□□ 1.63
VPS36-204ENST00000480923 IRS2Q9Y4H2 1338 aa25.2■■□□□ 1.62
VPS36-204ENST00000480923 EGFRP00533 1210 aa25.2■■□□□ 1.62
VPS36-204ENST00000480923 UBE4AQ14139 1066 aa25.2■■□□□ 1.62
VPS36-204ENST00000480923 KIF4BQ2VIQ3 1234 aa25.2■■□□□ 1.62
VPS36-204ENST00000480923 METTL24Q5JXM2 366 aa25.2■■□□□ 1.62
VPS36-204ENST00000480923 DACT2Q5SW24 774 aa25.2■■□□□ 1.62
VPS36-204ENST00000480923 STRIP1Q5VSL9 837 aa25.2■■□□□ 1.62
VPS36-204ENST00000480923 ZNF609O15014 1411 aa25.2■■□□□ 1.62
VPS36-204ENST00000480923 TMEM88BA6NKF7 163 aa25.19■■□□□ 1.62
VPS36-204ENST00000480923 GNAI3P08754 354 aa25.19■■□□□ 1.62
VPS36-204ENST00000480923 TTLL5Q6EMB2 1281 aa25.19■■□□□ 1.62
VPS36-204ENST00000480923 GMLQ99445 158 aa25.19■■□□□ 1.62
VPS36-204ENST00000480923 MXD3Q9BW11 206 aa25.19■■□□□ 1.62
VPS36-204ENST00000480923 PGAP2Q9UHJ9 254 aa25.19■■□□□ 1.62
VPS36-204ENST00000480923 USP17L8P0C7I0 530 aa25.18■■□□□ 1.62
VPS36-204ENST00000480923 RFX5P48382 616 aaPredicted RBP25.18■■□□□ 1.62
VPS36-204ENST00000480923 GTF2IP78347 998 aa25.18■■□□□ 1.62
VPS36-204ENST00000480923 MYO3BQ8WXR4 1341 aa25.17■■□□□ 1.62
VPS36-204ENST00000480923 TRAF5O00463 557 aa25.17■■□□□ 1.62
VPS36-204ENST00000480923 ZNF280AP59817 542 aaPredicted RBP25.17■■□□□ 1.62
VPS36-204ENST00000480923 FMR1Q06787 632 aaKnown RBP eCLIP25.17■■□□□ 1.62
VPS36-204ENST00000480923 GLIS2Q9BZE0 524 aaPredicted RBP25.17■■□□□ 1.62
VPS36-204ENST00000480923 A0A1B0GUL6 1792 aa25.17■■□□□ 1.62
VPS36-204ENST00000480923 PTPN12Q05209 780 aaKnown RBP25.16■■□□□ 1.62
VPS36-204ENST00000480923 EYA2O00167 538 aa25.15■■□□□ 1.62
VPS36-204ENST00000480923 IL1R1P14778 569 aa25.15■■□□□ 1.62
VPS36-204ENST00000480923 CDC37L1Q7L3B6 337 aa25.15■■□□□ 1.62
VPS36-204ENST00000480923 FTSJ3Q8IY81 847 aaKnown RBP25.15■■□□□ 1.62
VPS36-204ENST00000480923 TMEM57Q8N5G2 664 aa25.15■■□□□ 1.62
VPS36-204ENST00000480923 PDE8BO95263 885 aa25.14■■□□□ 1.62
VPS36-204ENST00000480923 GYG1P46976 350 aa25.14■■□□□ 1.62
VPS36-204ENST00000480923 OGFOD1Q8N543 542 aa25.14■■□□□ 1.62
VPS36-204ENST00000480923 DCPSQ96C86 337 aaKnown RBP25.14■■□□□ 1.62
VPS36-204ENST00000480923 SIL1Q9H173 461 aa25.14■■□□□ 1.62
VPS36-204ENST00000480923 MYOZ2Q9NPC6 264 aa25.14■■□□□ 1.62
VPS36-204ENST00000480923 MKRN1Q9UHC7 482 aaKnown RBP25.14■■□□□ 1.62
VPS36-204ENST00000480923 PSME4Q14997 1843 aa25.14■■□□□ 1.61
VPS36-204ENST00000480923 USP48Q86UV5 1035 aa25.13■■□□□ 1.61
VPS36-204ENST00000480923 VGLL2Q8N8G2 317 aa25.13■■□□□ 1.61
VPS36-204ENST00000480923 HIBADHP31937 336 aaKnown RBP25.12■■□□□ 1.61
VPS36-204ENST00000480923 KIAA0825Q8IV33 1275 aa25.12■■□□□ 1.61
VPS36-204ENST00000480923 ABT1Q9ULW3 272 aaKnown RBP25.12■■□□□ 1.61
VPS36-204ENST00000480923 GNAI2P04899 355 aa25.11■■□□□ 1.61
VPS36-204ENST00000480923 SCARF1Q14162 830 aa25.11■■□□□ 1.61
VPS36-204ENST00000480923 KRT26Q7Z3Y9 468 aa25.11■■□□□ 1.61
VPS36-204ENST00000480923 VPS37DQ86XT2 251 aa25.11■■□□□ 1.61
VPS36-204ENST00000480923 DZIP1LQ8IYY4 767 aaKnown RBP25.11■■□□□ 1.61
VPS36-204ENST00000480923 FAM84BQ96KN1 310 aaPredicted RBP25.11■■□□□ 1.61
VPS36-204ENST00000480923 GGA3Q9NZ52 723 aa25.11■■□□□ 1.61
VPS36-204ENST00000480923 JAG2Q9Y219 1238 aa25.11■■□□□ 1.61
VPS36-204ENST00000480923 ASTN2O75129 1339 aaPredicted RBP25.11■■□□□ 1.61
VPS36-204ENST00000480923 PUM3Q15397 648 aaKnown RBP25.1■■□□□ 1.61
VPS36-204ENST00000480923 CAVIN4Q5BKX8 364 aa25.1■■□□□ 1.61
VPS36-204ENST00000480923 ATG9AQ7Z3C6 839 aa25.1■■□□□ 1.61
VPS36-204ENST00000480923 ZNF408Q9H9D4 720 aa25.1■■□□□ 1.61
VPS36-204ENST00000480923 FBXO3Q9UK99 471 aa25.1■■□□□ 1.61
VPS36-204ENST00000480923 HDAC9Q9UKV0 1011 aa25.1■■□□□ 1.61
VPS36-204ENST00000480923 PA2G4Q9UQ80 394 aaKnown RBP25.1■■□□□ 1.61
VPS36-204ENST00000480923 SRGAP3O43295 1099 aa25.09■■□□□ 1.61
VPS36-204ENST00000480923 CIAO1O76071 339 aa25.09■■□□□ 1.61
VPS36-204ENST00000480923 CELF2O95319 508 aaKnown RBP25.09■■□□□ 1.61
VPS36-204ENST00000480923 IFIT1P09914 478 aaKnown RBP25.09■■□□□ 1.61
VPS36-204ENST00000480923 CST9Q5W186 159 aa25.09■■□□□ 1.61
VPS36-204ENST00000480923 ITPRIPQ8IWB1 547 aa25.09■■□□□ 1.61
VPS36-204ENST00000480923 TDRD7Q8NHU6 1098 aaKnown RBP25.09■■□□□ 1.61
VPS36-204ENST00000480923 CNTNAP1P78357 1384 aa25.08■■□□□ 1.61
VPS36-204ENST00000480923 SASH1O94885 1247 aa25.08■■□□□ 1.61
VPS36-204ENST00000480923 MMP14P50281 582 aa25.08■■□□□ 1.61
VPS36-204ENST00000480923 ANGEL2Q5VTE6 544 aaKnown RBP25.08■■□□□ 1.61
VPS36-204ENST00000480923 CERS5Q8N5B7 392 aa25.08■■□□□ 1.61
VPS36-204ENST00000480923 JMYQ8N9B5 988 aa25.08■■□□□ 1.61
VPS36-204ENST00000480923 ADM5C9JUS6 153 aa25.07■■□□□ 1.6
VPS36-204ENST00000480923 RLBP1P12271 317 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms