RNA–Protein interactions for RNA: ENST00000480698.1

TMEM40-207, Transcript of transmembrane protein 40, humanhuman

TSL 2

Gene TMEM40, Length 507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-207ENST00000480698 PNISRQ8TF01 805 aaKnown RBP12.5□□□□□ -0.41
TMEM40-207ENST00000480698 TRMT112Q9UI30 125 aaKnown RBP12.5□□□□□ -0.41
TMEM40-207ENST00000480698 ZSWIM8A7E2V4 1837 aa12.49□□□□□ -0.41
TMEM40-207ENST00000480698 WTIPA6NIX2 430 aaPredicted RBP12.49□□□□□ -0.41
TMEM40-207ENST00000480698 THUMPD2Q9BTF0 503 aaKnown RBP12.49□□□□□ -0.41
TMEM40-207ENST00000480698 STXBP5LQ9Y2K9 1186 aa12.49□□□□□ -0.41
TMEM40-207ENST00000480698 OTOFQ9HC10 1997 aa12.49□□□□□ -0.41
TMEM40-207ENST00000480698 ZBTB7BO15156 539 aaPredicted RBP12.48□□□□□ -0.41
TMEM40-207ENST00000480698 SLC4A8Q2Y0W8 1093 aa12.48□□□□□ -0.41
TMEM40-207ENST00000480698 DACT2Q5SW24 774 aa12.48□□□□□ -0.41
TMEM40-207ENST00000480698 PODNQ7Z5L7 613 aa12.48□□□□□ -0.41
TMEM40-207ENST00000480698 CLMNQ96JQ2 1002 aa12.48□□□□□ -0.41
TMEM40-207ENST00000480698 ANGEL1Q9UNK9 670 aaKnown RBP12.48□□□□□ -0.41
TMEM40-207ENST00000480698 FZD1Q9UP38 647 aa12.48□□□□□ -0.41
TMEM40-207ENST00000480698 USP17L3A6NCW0 530 aa12.47□□□□□ -0.41
TMEM40-207ENST00000480698 USP17L4A6NCW7 530 aa12.47□□□□□ -0.41
TMEM40-207ENST00000480698 MMP14P50281 582 aa12.47□□□□□ -0.41
TMEM40-207ENST00000480698 USP17L1Q7RTZ2 530 aa12.47□□□□□ -0.41
TMEM40-207ENST00000480698 APOBEC3FQ8IUX4 373 aaKnown RBP12.47□□□□□ -0.41
TMEM40-207ENST00000480698 PRUNE2Q8WUY3 3088 aa12.47□□□□□ -0.41
TMEM40-207ENST00000480698 ECM29Q5VYK3 1845 aa12.46□□□□□ -0.41
TMEM40-207ENST00000480698 UFL1O94874 794 aa12.46□□□□□ -0.41
TMEM40-207ENST00000480698 RPS8P62241 208 aaKnown RBP12.46□□□□□ -0.41
TMEM40-207ENST00000480698 CC2D1BQ5T0F9 858 aaKnown RBP12.46□□□□□ -0.41
TMEM40-207ENST00000480698 SH3TC2Q8TF17 1288 aa12.46□□□□□ -0.41
TMEM40-207ENST00000480698 MS4A4AQ96JQ5 239 aa12.46□□□□□ -0.41
TMEM40-207ENST00000480698 ISCA1Q9BUE6 129 aa12.46□□□□□ -0.41
TMEM40-207ENST00000480698 LAMA2P24043 3122 aaKnown RBP12.45□□□□□ -0.42
TMEM40-207ENST00000480698 MYO3BQ8WXR4 1341 aa12.45□□□□□ -0.42
TMEM40-207ENST00000480698 PRKG1Q13976 671 aa12.45□□□□□ -0.42
TMEM40-207ENST00000480698 OTUD7BQ6GQQ9 843 aa12.45□□□□□ -0.42
TMEM40-207ENST00000480698 DPF3Q92784 378 aa12.45□□□□□ -0.42
TMEM40-207ENST00000480698 SLC10A4Q96EP9 437 aa12.45□□□□□ -0.42
TMEM40-207ENST00000480698 GGA1Q9UJY5 639 aa12.45□□□□□ -0.42
TMEM40-207ENST00000480698 MED23Q9ULK4 1368 aa12.44□□□□□ -0.42
TMEM40-207ENST00000480698 SASH1O94885 1247 aa12.44□□□□□ -0.42
TMEM40-207ENST00000480698 ANXA1P04083 346 aa12.44□□□□□ -0.42
TMEM40-207ENST00000480698 GJA8P48165 433 aa12.44□□□□□ -0.42
TMEM40-207ENST00000480698 COPS6Q7L5N1 327 aa12.44□□□□□ -0.42
TMEM40-207ENST00000480698 HTATIP2Q9BUP3 242 aa12.44□□□□□ -0.42
TMEM40-207ENST00000480698 CDH23Q9H251 3354 aa12.44□□□□□ -0.42
TMEM40-207ENST00000480698 ALPK3Q96L96 1907 aa12.43□□□□□ -0.42
TMEM40-207ENST00000480698 ARHGEF6Q15052 776 aa12.43□□□□□ -0.42
TMEM40-207ENST00000480698 MTFR1Q15390 333 aa12.43□□□□□ -0.42
TMEM40-207ENST00000480698 STRIP1Q5VSL9 837 aa12.43□□□□□ -0.42
TMEM40-207ENST00000480698 FAM89AQ96GI7 184 aa12.43□□□□□ -0.42
TMEM40-207ENST00000480698 MXD3Q9BW11 206 aa12.43□□□□□ -0.42
TMEM40-207ENST00000480698 MTMR10Q9NXD2 777 aa12.43□□□□□ -0.42
TMEM40-207ENST00000480698 PPP2R3BQ9Y5P8 575 aa12.43□□□□□ -0.42
TMEM40-207ENST00000480698 NR2E3Q9Y5X4 410 aa12.43□□□□□ -0.42
TMEM40-207ENST00000480698 TTC28Q96AY4 2481 aa12.43□□□□□ -0.42
TMEM40-207ENST00000480698 XDHP47989 1333 aa12.42□□□□□ -0.42
TMEM40-207ENST00000480698 GNRH1P01148 92 aa12.42□□□□□ -0.42
TMEM40-207ENST00000480698 GJB1P08034 283 aa12.42□□□□□ -0.42
TMEM40-207ENST00000480698 BMP8BP34820 402 aa12.42□□□□□ -0.42
TMEM40-207ENST00000480698 PRMT2P55345 433 aa12.42□□□□□ -0.42
TMEM40-207ENST00000480698 OGFOD1Q8N543 542 aa12.42□□□□□ -0.42
TMEM40-207ENST00000480698 NKX2-3Q8TAU0 364 aa12.42□□□□□ -0.42
TMEM40-207ENST00000480698 XAGE3Q8WTP9 111 aa12.42□□□□□ -0.42
TMEM40-207ENST00000480698 BRI3BPQ8WY22 251 aa12.42□□□□□ -0.42
TMEM40-207ENST00000480698 GDF15Q99988 308 aa12.42□□□□□ -0.42
TMEM40-207ENST00000480698 ARHGAP39Q9C0H5 1083 aa12.42□□□□□ -0.42
TMEM40-207ENST00000480698 DEFB129Q9H1M3 183 aa12.42□□□□□ -0.42
TMEM40-207ENST00000480698 PRDM6Q9NQX0 595 aa12.42□□□□□ -0.42
TMEM40-207ENST00000480698 ZNF804BA4D1E1 1349 aa12.41□□□□□ -0.42
TMEM40-207ENST00000480698 LRIT3Q3SXY7 679 aa12.41□□□□□ -0.42
TMEM40-207ENST00000480698 ANKRD13DQ6ZTN6 518 aa12.41□□□□□ -0.42
TMEM40-207ENST00000480698 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.41□□□□□ -0.42
TMEM40-207ENST00000480698 DEFB123Q8N688 67 aa12.41□□□□□ -0.42
TMEM40-207ENST00000480698 MTMR14Q8NCE2 650 aa12.41□□□□□ -0.42
TMEM40-207ENST00000480698 SEC31BQ9NQW1 1179 aa12.41□□□□□ -0.42
TMEM40-207ENST00000480698 PPP1R12BO60237 982 aaPredicted RBP12.4□□□□□ -0.42
TMEM40-207ENST00000480698 USP2O75604 605 aaPredicted RBP12.4□□□□□ -0.42
TMEM40-207ENST00000480698 MYCP01106 439 aaPredicted RBP12.4□□□□□ -0.42
TMEM40-207ENST00000480698 LACTBP83111 547 aaPredicted RBP12.4□□□□□ -0.42
TMEM40-207ENST00000480698 TRIM28Q13263 835 aaKnown RBP12.4□□□□□ -0.42
TMEM40-207ENST00000480698 Q7L0L9 218 aa12.4□□□□□ -0.42
TMEM40-207ENST00000480698 ANKIB1Q9P2G1 1089 aa12.4□□□□□ -0.42
TMEM40-207ENST00000480698 G3V3G9 751 aa12.39□□□□□ -0.43
TMEM40-207ENST00000480698 IRS4O14654 1257 aaPredicted RBP12.39□□□□□ -0.43
TMEM40-207ENST00000480698 TLR2O60603 784 aa12.39□□□□□ -0.43
TMEM40-207ENST00000480698 U2AF1L5P0DN76 240 aaPredicted RBP12.39□□□□□ -0.43
TMEM40-207ENST00000480698 ATP2B4P23634 1241 aa12.39□□□□□ -0.43
TMEM40-207ENST00000480698 CTGFP29279 349 aa12.39□□□□□ -0.43
TMEM40-207ENST00000480698 U2AF1Q01081 240 aaKnown RBP eCLIP12.39□□□□□ -0.43
TMEM40-207ENST00000480698 DCAF8Q5TAQ9 597 aa12.39□□□□□ -0.43
TMEM40-207ENST00000480698 ANKRD13AQ8IZ07 590 aa12.39□□□□□ -0.43
TMEM40-207ENST00000480698 FAM43AQ8N2R8 423 aa12.39□□□□□ -0.43
TMEM40-207ENST00000480698 ZFYVE28Q9HCC9 887 aa12.39□□□□□ -0.43
TMEM40-207ENST00000480698 NUDCQ9Y266 331 aa12.39□□□□□ -0.43
TMEM40-207ENST00000480698 TAF1CQ15572 869 aaPredicted RBP12.38□□□□□ -0.43
TMEM40-207ENST00000480698 PLBD2Q8NHP8 589 aa12.38□□□□□ -0.43
TMEM40-207ENST00000480698 PLEKHF1Q96S99 279 aa12.38□□□□□ -0.43
TMEM40-207ENST00000480698 ZCCHC17Q9NP64 241 aaKnown RBP12.38□□□□□ -0.43
TMEM40-207ENST00000480698 STAP2Q9UGK3 403 aa12.38□□□□□ -0.43
TMEM40-207ENST00000480698 COL2A1P02458 1487 aaPredicted RBP12.38□□□□□ -0.43
TMEM40-207ENST00000480698 ZNF316A6NFI3 1004 aaPredicted RBP12.37□□□□□ -0.43
TMEM40-207ENST00000480698 EIF2S2P20042 333 aaKnown RBP12.37□□□□□ -0.43
TMEM40-207ENST00000480698 AIMP1Q12904 312 aaKnown RBP12.37□□□□□ -0.43
TMEM40-207ENST00000480698 ZNF428Q96B54 188 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms