RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 PWP2Q15269 919 aaKnown RBP12.33□□□□□ -0.44
SIK3-210ENST00000480468 HDXQ7Z353 690 aa12.33□□□□□ -0.44
SIK3-210ENST00000480468 CLGNO14967 610 aa12.32□□□□□ -0.44
SIK3-210ENST00000480468 NLRP12P59046 1061 aa12.32□□□□□ -0.44
SIK3-210ENST00000480468 FANCCQ00597 558 aa12.32□□□□□ -0.44
SIK3-210ENST00000480468 NMIQ13287 307 aaPredicted RBP12.32□□□□□ -0.44
SIK3-210ENST00000480468 DPCR1Q3MIW9 517 aa12.32□□□□□ -0.44
SIK3-210ENST00000480468 ERC1Q8IUD2 1116 aa12.32□□□□□ -0.44
SIK3-210ENST00000480468 RAB21Q9UL25 225 aa12.32□□□□□ -0.44
SIK3-210ENST00000480468 PPP2R2CQ9Y2T4 447 aa12.32□□□□□ -0.44
SIK3-210ENST00000480468 RIMBP3CA6NJZ7 1639 aa12.31□□□□□ -0.44
SIK3-210ENST00000480468 RIMBP3BA6NNM3 1639 aa12.31□□□□□ -0.44
SIK3-210ENST00000480468 RIMBP3Q9UFD9 1639 aa12.31□□□□□ -0.44
SIK3-210ENST00000480468 WASLO00401 505 aaPredicted RBP12.31□□□□□ -0.44
SIK3-210ENST00000480468 GNL2Q13823 731 aaKnown RBP12.31□□□□□ -0.44
SIK3-210ENST00000480468 COL9A3Q14050 684 aaPredicted RBP12.31□□□□□ -0.44
SIK3-210ENST00000480468 USPL1Q5W0Q7 1092 aa12.31□□□□□ -0.44
SIK3-210ENST00000480468 ADALQ6DHV7 355 aa12.31□□□□□ -0.44
SIK3-210ENST00000480468 EFCAB13Q8IY85 973 aa12.31□□□□□ -0.44
SIK3-210ENST00000480468 USP28Q96RU2 1077 aa12.31□□□□□ -0.44
SIK3-210ENST00000480468 SDF4Q9BRK5 362 aa12.31□□□□□ -0.44
SIK3-210ENST00000480468 A0A087WWV3 80 aa12.31□□□□□ -0.44
SIK3-210ENST00000480468 STK3Q13188 491 aa12.31□□□□□ -0.44
SIK3-210ENST00000480468 MTHFSDQ2M296 383 aaKnown RBP12.31□□□□□ -0.44
SIK3-210ENST00000480468 BEND6Q5SZJ8 279 aaPredicted RBP12.31□□□□□ -0.44
SIK3-210ENST00000480468 KIFC2Q96AC6 838 aa12.31□□□□□ -0.44
SIK3-210ENST00000480468 DDX11Q96FC9 970 aa12.31□□□□□ -0.44
SIK3-210ENST00000480468 CEP89Q96ST8 783 aa12.31□□□□□ -0.44
SIK3-210ENST00000480468 EPC1Q9H2F5 836 aa12.31□□□□□ -0.44
SIK3-210ENST00000480468 VPS18Q9P253 973 aa12.31□□□□□ -0.44
SIK3-210ENST00000480468 CEP170BQ9Y4F5 1589 aaPredicted RBP12.31□□□□□ -0.44
SIK3-210ENST00000480468 KDRP35968 1356 aa12.31□□□□□ -0.44
SIK3-210ENST00000480468 NUTM2FA1L443 756 aa12.3□□□□□ -0.44
SIK3-210ENST00000480468 ME1P48163 572 aa12.3□□□□□ -0.44
SIK3-210ENST00000480468 NUTM2GQ5VZR2 741 aa12.3□□□□□ -0.44
SIK3-210ENST00000480468 MMS22LQ6ZRQ5 1243 aa12.3□□□□□ -0.44
SIK3-210ENST00000480468 CCDC91Q7Z6B0 441 aa12.3□□□□□ -0.44
SIK3-210ENST00000480468 TMEM139Q8IV31 216 aa12.3□□□□□ -0.44
SIK3-210ENST00000480468 FAM227BQ96M60 508 aa12.3□□□□□ -0.44
SIK3-210ENST00000480468 TCEANC2Q96MN5 208 aa12.3□□□□□ -0.44
SIK3-210ENST00000480468 UTP14AQ9BVJ6 771 aaKnown RBP12.3□□□□□ -0.44
SIK3-210ENST00000480468 NEDD4P46934 1319 aa12.3□□□□□ -0.44
SIK3-210ENST00000480468 PFKFB2O60825 505 aa12.3□□□□□ -0.44
SIK3-210ENST00000480468 ERLIN1O75477 346 aa12.3□□□□□ -0.44
SIK3-210ENST00000480468 GSCP56915 257 aaPredicted RBP12.3□□□□□ -0.44
SIK3-210ENST00000480468 GNG11P61952 73 aa12.3□□□□□ -0.44
SIK3-210ENST00000480468 CEBPZQ03701 1054 aaKnown RBP12.3□□□□□ -0.44
SIK3-210ENST00000480468 TUBB2AQ13885 445 aa12.3□□□□□ -0.44
SIK3-210ENST00000480468 MCTP2Q6DN12 878 aa12.3□□□□□ -0.44
SIK3-210ENST00000480468 WAPLQ7Z5K2 1190 aa12.3□□□□□ -0.44
SIK3-210ENST00000480468 VSTM4Q8IW00 320 aa12.3□□□□□ -0.44
SIK3-210ENST00000480468 MSANTD4Q8NCY6 345 aa12.3□□□□□ -0.44
SIK3-210ENST00000480468 FAM71BQ8TC56 605 aa12.3□□□□□ -0.44
SIK3-210ENST00000480468 TUBB2BQ9BVA1 445 aa12.3□□□□□ -0.44
SIK3-210ENST00000480468 FAM107BQ9H098 131 aa12.3□□□□□ -0.44
SIK3-210ENST00000480468 PDE11AQ9HCR9 933 aa12.3□□□□□ -0.44
SIK3-210ENST00000480468 RNF216Q9NWF9 866 aaPredicted RBP12.3□□□□□ -0.44
SIK3-210ENST00000480468 SBNO1A3KN83 1393 aa12.3□□□□□ -0.44
SIK3-210ENST00000480468 NALCNQ8IZF0 1738 aa12.3□□□□□ -0.44
SIK3-210ENST00000480468 PEAK1Q9H792 1746 aa12.3□□□□□ -0.44
SIK3-210ENST00000480468 ALDH1L1O75891 902 aa12.29□□□□□ -0.44
SIK3-210ENST00000480468 TUBBP07437 444 aa12.29□□□□□ -0.44
SIK3-210ENST00000480468 OS9Q13438 667 aaPredicted RBP12.29□□□□□ -0.44
SIK3-210ENST00000480468 DRC1Q96MC2 740 aa12.29□□□□□ -0.44
SIK3-210ENST00000480468 WDR24Q96S15 920 aa12.29□□□□□ -0.44
SIK3-210ENST00000480468 RTEL1Q9NZ71 1219 aa12.29□□□□□ -0.44
SIK3-210ENST00000480468 HDAC5Q9UQL6 1122 aa12.29□□□□□ -0.44
SIK3-210ENST00000480468 OVOS2A0A0J9YW53 1432 aa12.29□□□□□ -0.44
SIK3-210ENST00000480468 OVOS2Q6IE36 1432 aa12.29□□□□□ -0.44
SIK3-210ENST00000480468 SRGAP1Q7Z6B7 1085 aa12.29□□□□□ -0.44
SIK3-210ENST00000480468 PCDHA7Q9UN72 937 aa12.29□□□□□ -0.44
SIK3-210ENST00000480468 L1RE1Q9UN81 338 aa12.29□□□□□ -0.44
SIK3-210ENST00000480468 CCDC61Q9Y6R9 512 aa12.29□□□□□ -0.44
SIK3-210ENST00000480468 A0A0D9SFI3 127 aa12.28□□□□□ -0.44
SIK3-210ENST00000480468 FOXO3O43524 673 aa12.28□□□□□ -0.44
SIK3-210ENST00000480468 STX10O60499 249 aa12.28□□□□□ -0.44
SIK3-210ENST00000480468 PPFIA4O75335 1185 aa12.28□□□□□ -0.44
SIK3-210ENST00000480468 SLC3A2P08195 630 aaKnown RBP12.28□□□□□ -0.44
SIK3-210ENST00000480468 NSUN7Q8NE18 718 aaKnown RBP12.28□□□□□ -0.44
SIK3-210ENST00000480468 NEK1Q96PY6 1258 aa12.28□□□□□ -0.44
SIK3-210ENST00000480468 FTOQ9C0B1 505 aaKnown RBP eCLIP12.28□□□□□ -0.44
SIK3-210ENST00000480468 HSD3B7Q9H2F3 369 aa12.28□□□□□ -0.44
SIK3-210ENST00000480468 MED4Q9NPJ6 270 aa12.28□□□□□ -0.44
SIK3-210ENST00000480468 TAF6LQ9Y6J9 622 aa12.28□□□□□ -0.44
SIK3-210ENST00000480468 MAP3K19Q56UN5 1328 aa12.28□□□□□ -0.44
SIK3-210ENST00000480468 A0A087WUV0 522 aaPredicted RBP12.27□□□□□ -0.44
SIK3-210ENST00000480468 NBPF7P0C2Y1 421 aaPredicted RBP12.27□□□□□ -0.44
SIK3-210ENST00000480468 UBASH3AP57075 661 aa12.27□□□□□ -0.44
SIK3-210ENST00000480468 CHMP4BP1P59074 171 aa12.27□□□□□ -0.44
SIK3-210ENST00000480468 SCRN1Q12765 414 aa12.27□□□□□ -0.44
SIK3-210ENST00000480468 FOXR1Q6PIV2 292 aa12.27□□□□□ -0.44
SIK3-210ENST00000480468 LRRC31Q6UY01 552 aa12.27□□□□□ -0.44
SIK3-210ENST00000480468 CHMP4CQ96CF2 233 aa12.27□□□□□ -0.44
SIK3-210ENST00000480468 NUDT16Q96DE0 195 aaKnown RBP12.27□□□□□ -0.44
SIK3-210ENST00000480468 GBP3Q9H0R5 595 aa12.27□□□□□ -0.44
SIK3-210ENST00000480468 AKAP2Q9Y2D5 859 aa12.27□□□□□ -0.44
SIK3-210ENST00000480468 USP31Q70CQ4 1352 aa12.27□□□□□ -0.45
SIK3-210ENST00000480468 TOP1P11387 765 aaKnown RBP12.27□□□□□ -0.45
SIK3-210ENST00000480468 NDUFA8P51970 172 aa12.27□□□□□ -0.45
SIK3-210ENST00000480468 EIF5P55010 431 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms