RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 SGSM2O43147 1006 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 CALCOCO2Q13137 446 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 MTMR3Q13615 1198 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 PPP4R3AQ6IN85 833 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 ANKRD13DQ6ZTN6 518 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 ARMC9Q7Z3E5 817 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 AOPEPQ8N6M6 819 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 CCDC26Q8TAB7 109 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 CUL5Q93034 780 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 MEIS3Q99687 375 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 EXOC1Q9NV70 894 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 GNA11P29992 359 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 MCM10Q7L590 875 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 CPLX4Q7Z7G2 160 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 ARHGAP24Q8N264 748 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 SYTL4Q96C24 671 aaPredicted RBP6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 RTL9Q8NET4 1388 aa6.97□□□□□ -1.29
PRPF4B-205ENST00000480058 WHAMMP3Q1A5X7 153 aa6.96□□□□□ -1.29
PRPF4B-205ENST00000480058 MSL1Q68DK7 614 aa6.96□□□□□ -1.29
PRPF4B-205ENST00000480058 HS2ST1Q7LGA3 356 aa6.96□□□□□ -1.29
PRPF4B-205ENST00000480058 THUMPD2Q9BTF0 503 aaKnown RBP6.96□□□□□ -1.29
PRPF4B-205ENST00000480058 FBXO3Q9UK99 471 aa6.96□□□□□ -1.29
PRPF4B-205ENST00000480058 EMILIN1Q9Y6C2 1016 aa6.96□□□□□ -1.29
PRPF4B-205ENST00000480058 ADGRF5Q8IZF2 1346 aa6.96□□□□□ -1.29
PRPF4B-205ENST00000480058 SMARCA5O60264 1052 aaPredicted RBP6.96□□□□□ -1.29
PRPF4B-205ENST00000480058 CUTAO60888 179 aa6.96□□□□□ -1.29
PRPF4B-205ENST00000480058 ZNF75DP51815 510 aa6.96□□□□□ -1.29
PRPF4B-205ENST00000480058 LDHAL6AQ6ZMR3 332 aa6.96□□□□□ -1.29
PRPF4B-205ENST00000480058 TBC1D5Q92609 795 aa6.96□□□□□ -1.29
PRPF4B-205ENST00000480058 CCDC8Q9H0W5 538 aaPredicted RBP6.96□□□□□ -1.29
PRPF4B-205ENST00000480058 HELLSQ9NRZ9 838 aa6.96□□□□□ -1.29
PRPF4B-205ENST00000480058 CNPY2Q9Y2B0 182 aa6.96□□□□□ -1.29
PRPF4B-205ENST00000480058 NDUFAB1O14561 156 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 LMOD1P29536 600 aaPredicted RBP6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 NOP2P46087 812 aaKnown RBP6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 RTN1Q16799 776 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 RRAGBQ5VZM2 374 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 CPLX3Q8WVH0 158 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 NAPGQ99747 312 aaPredicted RBP6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 HAUS4Q9H6D7 363 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 IDI1Q13907 227 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 CNPY4Q8N129 248 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 IQCGQ9H095 443 aaKnown RBP6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 SHANK2Q9UPX8 1470 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 MAPKBP1O60336 1514 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 IQGAP2Q13576 1575 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 BIN1O00499 593 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 WDHD1O75717 1129 aaPredicted RBP6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 SETSIPP0DME0 302 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 PTGS1P23219 599 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 INPP5BP32019 993 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 GBP1P32455 592 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 LMNTD2Q8IXW0 634 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 RBM42Q9BTD8 480 aaKnown RBP6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 CCDC113Q9H0I3 377 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 PRDM10Q9NQV6 1147 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 HOMER2Q9NSB8 354 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 LMBRD1Q9NUN5 540 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 ABCF2Q9UG63 623 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 KCNG1Q9UIX4 513 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 TBCAO75347 108 aaKnown RBP6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 PAK2Q13177 524 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 SLMAPQ14BN4 828 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 RRS1Q15050 365 aaKnown RBP6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 WDR78Q5VTH9 848 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 TRIM7Q9C029 511 aa6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 SEPT11Q9NVA2 429 aaKnown RBP6.96□□□□□ -1.3
PRPF4B-205ENST00000480058 FLT4P35916 1363 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 EFCAB8A8MWE9 144 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 PLCG2P16885 1265 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 USP5P45974 858 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 AK2P54819 239 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 CHMP4BP1P59074 171 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 GSTO1P78417 241 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 KRT79Q5XKE5 535 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 TOM1L2Q6ZVM7 507 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 AFAP1L1Q8TED9 768 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 RABGGTAQ92696 567 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 F6X3S4 739 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 MAP4K4O95819 1239 aaPredicted RBP6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 RUFY3Q7L099 469 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 FERMT2Q96AC1 680 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 CRNKL1Q9BZJ0 848 aaKnown RBP6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 RBSNQ9H1K0 784 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 RRAGDQ9NQL2 400 aaPredicted RBP6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 TEX14Q8IWB6 1497 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 DISP3Q9P2K9 1392 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 A0A1W2PQ27 194 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 A0A1W2PQ64 194 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 A0A1W2PQD8 194 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 ATP2A2P16615 1042 aaKnown RBP6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 MICALL1Q8N3F8 863 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 RNF14Q9UBS8 474 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 CCDC96Q2M329 555 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 MICU3Q86XE3 530 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 IFT20Q8IY31 132 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 NKIRAS1Q9NYS0 192 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 ATP2B3Q16720 1220 aa6.95□□□□□ -1.3
PRPF4B-205ENST00000480058 RBM26Q5T8P6 1007 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms