RNA–Protein interactions for RNA: ENST00000479398.5

PKP4-209, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-209ENST00000479398 USP17L4A6NCW7 530 aa25.96■■□□□ 1.75
PKP4-209ENST00000479398 MAP1SQ66K74 1059 aaPredicted RBP25.96■■□□□ 1.75
PKP4-209ENST00000479398 USP17L1Q7RTZ2 530 aa25.96■■□□□ 1.75
PKP4-209ENST00000479398 MICALL2Q8IY33 904 aa25.96■■□□□ 1.75
PKP4-209ENST00000479398 CLUAP1Q96AJ1 413 aa25.96■■□□□ 1.75
PKP4-209ENST00000479398 MEIS3Q99687 375 aa25.96■■□□□ 1.75
PKP4-209ENST00000479398 RSBN1LQ6PCB5 846 aaPredicted RBP25.95■■□□□ 1.74
PKP4-209ENST00000479398 MROH5Q6ZUA9 1318 aa25.94■■□□□ 1.74
PKP4-209ENST00000479398 IRS2Q9Y4H2 1338 aa25.94■■□□□ 1.74
PKP4-209ENST00000479398 HIRAP54198 1017 aaPredicted RBP25.94■■□□□ 1.74
PKP4-209ENST00000479398 HTRA3P83110 453 aa25.94■■□□□ 1.74
PKP4-209ENST00000479398 LRRC24Q50LG9 513 aa25.94■■□□□ 1.74
PKP4-209ENST00000479398 DNAJC5GQ8N7S2 189 aa25.94■■□□□ 1.74
PKP4-209ENST00000479398 AGBL3Q8NEM8 1001 aa25.94■■□□□ 1.74
PKP4-209ENST00000479398 LRRFIP2Q9Y608 721 aaKnown RBP25.94■■□□□ 1.74
PKP4-209ENST00000479398 PSME4Q14997 1843 aa25.93■■□□□ 1.74
PKP4-209ENST00000479398 PASKQ96RG2 1323 aa25.93■■□□□ 1.74
PKP4-209ENST00000479398 A0A1B0GUL6 1792 aa25.93■■□□□ 1.74
PKP4-209ENST00000479398 GNAI3P08754 354 aa25.93■■□□□ 1.74
PKP4-209ENST00000479398 RFX5P48382 616 aaPredicted RBP25.93■■□□□ 1.74
PKP4-209ENST00000479398 UBE4AQ14139 1066 aa25.93■■□□□ 1.74
PKP4-209ENST00000479398 KLHDC4Q8TBB5 520 aa25.93■■□□□ 1.74
PKP4-209ENST00000479398 CD209Q9NNX6 404 aa25.93■■□□□ 1.74
PKP4-209ENST00000479398 PGAP2Q9UHJ9 254 aa25.93■■□□□ 1.74
PKP4-209ENST00000479398 SAMD7Q7Z3H4 446 aa25.92■■□□□ 1.74
PKP4-209ENST00000479398 ZC3H15Q8WU90 426 aaKnown RBP25.92■■□□□ 1.74
PKP4-209ENST00000479398 GMLQ99445 158 aa25.92■■□□□ 1.74
PKP4-209ENST00000479398 PTPN12Q05209 780 aaKnown RBP25.91■■□□□ 1.74
PKP4-209ENST00000479398 STRIP1Q5VSL9 837 aa25.91■■□□□ 1.74
PKP4-209ENST00000479398 TTLL5Q6EMB2 1281 aa25.91■■□□□ 1.74
PKP4-209ENST00000479398 TRPM4Q8TD43 1214 aa25.91■■□□□ 1.74
PKP4-209ENST00000479398 CEP350Q5VT06 3117 aa25.9■■□□□ 1.74
PKP4-209ENST00000479398 DACT2Q5SW24 774 aa25.9■■□□□ 1.74
PKP4-209ENST00000479398 TMEM57Q8N5G2 664 aa25.9■■□□□ 1.74
PKP4-209ENST00000479398 TBC1D10BQ4KMP7 808 aaPredicted RBP25.89■■□□□ 1.74
PKP4-209ENST00000479398 METTL24Q5JXM2 366 aa25.89■■□□□ 1.74
PKP4-209ENST00000479398 RBM26Q5T8P6 1007 aaKnown RBP25.89■■□□□ 1.74
PKP4-209ENST00000479398 ZNF609O15014 1411 aa25.88■■□□□ 1.73
PKP4-209ENST00000479398 EYA2O00167 538 aa25.88■■□□□ 1.73
PKP4-209ENST00000479398 PDE8BO95263 885 aa25.88■■□□□ 1.73
PKP4-209ENST00000479398 ZNF280AP59817 542 aaPredicted RBP25.88■■□□□ 1.73
PKP4-209ENST00000479398 GTF2IP78347 998 aa25.88■■□□□ 1.73
PKP4-209ENST00000479398 ZNF804AQ7Z570 1209 aa25.88■■□□□ 1.73
PKP4-209ENST00000479398 FBXW7Q969H0 707 aa25.88■■□□□ 1.73
PKP4-209ENST00000479398 EGFRP00533 1210 aa25.87■■□□□ 1.73
PKP4-209ENST00000479398 USP17L8P0C7I0 530 aa25.87■■□□□ 1.73
PKP4-209ENST00000479398 IL1R1P14778 569 aa25.87■■□□□ 1.73
PKP4-209ENST00000479398 DZIP1LQ8IYY4 767 aaKnown RBP25.87■■□□□ 1.73
PKP4-209ENST00000479398 VGLL2Q8N8G2 317 aa25.87■■□□□ 1.73
PKP4-209ENST00000479398 MXD3Q9BW11 206 aa25.87■■□□□ 1.73
PKP4-209ENST00000479398 CREBZFQ9NS37 354 aa25.86■■□□□ 1.73
PKP4-209ENST00000479398 FBXO3Q9UK99 471 aa25.86■■□□□ 1.73
PKP4-209ENST00000479398 MYO3BQ8WXR4 1341 aa25.86■■□□□ 1.73
PKP4-209ENST00000479398 GNAI2P04899 355 aa25.85■■□□□ 1.73
PKP4-209ENST00000479398 FTSJ3Q8IY81 847 aaKnown RBP25.85■■□□□ 1.73
PKP4-209ENST00000479398 FAM84BQ96KN1 310 aaPredicted RBP25.85■■□□□ 1.73
PKP4-209ENST00000479398 TMEM88BA6NKF7 163 aa25.84■■□□□ 1.73
PKP4-209ENST00000479398 HIBADHP31937 336 aaKnown RBP25.84■■□□□ 1.73
PKP4-209ENST00000479398 KIF4BQ2VIQ3 1234 aa25.84■■□□□ 1.73
PKP4-209ENST00000479398 ATG9AQ7Z3C6 839 aa25.84■■□□□ 1.73
PKP4-209ENST00000479398 POLR2AP24928 1970 aaKnown RBP25.84■■□□□ 1.73
PKP4-209ENST00000479398 CIAO1O76071 339 aa25.83■■□□□ 1.73
PKP4-209ENST00000479398 RLBP1P12271 317 aa25.83■■□□□ 1.73
PKP4-209ENST00000479398 GYG1P46976 350 aa25.83■■□□□ 1.73
PKP4-209ENST00000479398 CDC37L1Q7L3B6 337 aa25.83■■□□□ 1.73
PKP4-209ENST00000479398 KLRG1Q96E93 195 aa25.83■■□□□ 1.73
PKP4-209ENST00000479398 COPRSQ9NQ92 184 aa25.83■■□□□ 1.73
PKP4-209ENST00000479398 ZNF646O15015 1829 aaPredicted RBP25.82■■□□□ 1.72
PKP4-209ENST00000479398 TRAF5O00463 557 aa25.82■■□□□ 1.72
PKP4-209ENST00000479398 SASH1O94885 1247 aa25.82■■□□□ 1.72
PKP4-209ENST00000479398 MMP14P50281 582 aa25.82■■□□□ 1.72
PKP4-209ENST00000479398 FMR1Q06787 632 aaKnown RBP eCLIP25.82■■□□□ 1.72
PKP4-209ENST00000479398 MTX1Q13505 466 aa25.82■■□□□ 1.72
PKP4-209ENST00000479398 OGFOD1Q8N543 542 aa25.82■■□□□ 1.72
PKP4-209ENST00000479398 TDRD7Q8NHU6 1098 aaKnown RBP25.82■■□□□ 1.72
PKP4-209ENST00000479398 SIL1Q9H173 461 aa25.82■■□□□ 1.72
PKP4-209ENST00000479398 MYOZ2Q9NPC6 264 aa25.82■■□□□ 1.72
PKP4-209ENST00000479398 SRGAP3O43295 1099 aa25.81■■□□□ 1.72
PKP4-209ENST00000479398 FGFR2P21802 821 aa25.81■■□□□ 1.72
PKP4-209ENST00000479398 FBXO33Q7Z6M2 555 aa25.81■■□□□ 1.72
PKP4-209ENST00000479398 GLIS2Q9BZE0 524 aaPredicted RBP25.81■■□□□ 1.72
PKP4-209ENST00000479398 PA2G4Q9UQ80 394 aaKnown RBP25.81■■□□□ 1.72
PKP4-209ENST00000479398 ZBTB7BO15156 539 aaPredicted RBP25.8■■□□□ 1.72
PKP4-209ENST00000479398 PUM3Q15397 648 aaKnown RBP25.8■■□□□ 1.72
PKP4-209ENST00000479398 RCAN3Q9UKA8 241 aa25.8■■□□□ 1.72
PKP4-209ENST00000479398 IL15P40933 162 aaPredicted RBP25.79■■□□□ 1.72
PKP4-209ENST00000479398 FKBP1AP62942 108 aaKnown RBP25.79■■□□□ 1.72
PKP4-209ENST00000479398 SCARF1Q14162 830 aa25.79■■□□□ 1.72
PKP4-209ENST00000479398 CAVIN4Q5BKX8 364 aa25.79■■□□□ 1.72
PKP4-209ENST00000479398 USP48Q86UV5 1035 aa25.79■■□□□ 1.72
PKP4-209ENST00000479398 ITPRIPQ8IWB1 547 aa25.79■■□□□ 1.72
PKP4-209ENST00000479398 DCPSQ96C86 337 aaKnown RBP25.79■■□□□ 1.72
PKP4-209ENST00000479398 CEP126Q9P2H0 1117 aa25.79■■□□□ 1.72
PKP4-209ENST00000479398 IFIT1P09914 478 aaKnown RBP25.78■■□□□ 1.72
PKP4-209ENST00000479398 CST9Q5W186 159 aa25.78■■□□□ 1.72
PKP4-209ENST00000479398 VPS37DQ86XT2 251 aa25.78■■□□□ 1.72
PKP4-209ENST00000479398 KIAA0825Q8IV33 1275 aa25.78■■□□□ 1.72
PKP4-209ENST00000479398 CERS5Q8N5B7 392 aa25.78■■□□□ 1.72
PKP4-209ENST00000479398 HDAC9Q9UKV0 1011 aa25.78■■□□□ 1.72
PKP4-209ENST00000479398 FAM205AQ6ZU69 1335 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms