RNA–Protein interactions for RNA: ENST00000479162.5

NUP35-209, Transcript of nucleoporin 35, humanhuman

TSL 2

Gene NUP35, Length 2,828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-209ENST00000479162 CCDC114Q96M63 670 aa12.09□□□□□ -0.47
NUP35-209ENST00000479162 SENP3Q9H4L4 574 aaPredicted RBP12.09□□□□□ -0.47
NUP35-209ENST00000479162 TRPV5Q9NQA5 729 aa12.09□□□□□ -0.47
NUP35-209ENST00000479162 SPHKAPQ2M3C7 1700 aa12.08□□□□□ -0.48
NUP35-209ENST00000479162 OPA1O60313 960 aa12.08□□□□□ -0.48
NUP35-209ENST00000479162 KCNA2P16389 499 aa12.08□□□□□ -0.48
NUP35-209ENST00000479162 EIF4BP23588 611 aaKnown RBP12.08□□□□□ -0.48
NUP35-209ENST00000479162 UHMK1Q8TAS1 419 aaKnown RBP12.08□□□□□ -0.48
NUP35-209ENST00000479162 BHMTQ93088 406 aa12.08□□□□□ -0.48
NUP35-209ENST00000479162 KCNF1Q9H3M0 494 aa12.08□□□□□ -0.48
NUP35-209ENST00000479162 ZNF189O75820 626 aaPredicted RBP12.08□□□□□ -0.48
NUP35-209ENST00000479162 PKN1Q16512 942 aa12.08□□□□□ -0.48
NUP35-209ENST00000479162 CABS1Q96KC9 395 aa12.08□□□□□ -0.48
NUP35-209ENST00000479162 TMEM63CQ9P1W3 806 aa12.08□□□□□ -0.48
NUP35-209ENST00000479162 SETD1BQ9UPS6 1966 aaKnown RBP12.07□□□□□ -0.48
NUP35-209ENST00000479162 ANKRD65E5RJM6 399 aa12.07□□□□□ -0.48
NUP35-209ENST00000479162 SLU7O95391 586 aaKnown RBP12.07□□□□□ -0.48
NUP35-209ENST00000479162 FOXR1Q6PIV2 292 aa12.07□□□□□ -0.48
NUP35-209ENST00000479162 ZKSCAN4Q969J2 545 aaPredicted RBP12.07□□□□□ -0.48
NUP35-209ENST00000479162 ZCCHC17Q9NP64 241 aaKnown RBP12.07□□□□□ -0.48
NUP35-209ENST00000479162 ATP8A1Q9Y2Q0 1164 aa12.07□□□□□ -0.48
NUP35-209ENST00000479162 N6AMT1Q9Y5N5 214 aa12.07□□□□□ -0.48
NUP35-209ENST00000479162 ERVK-7P63135 1459 aa12.07□□□□□ -0.48
NUP35-209ENST00000479162 KDM4FA0A1W2PPD8 638 aa12.07□□□□□ -0.48
NUP35-209ENST00000479162 SMC1AQ14683 1233 aaKnown RBP12.07□□□□□ -0.48
NUP35-209ENST00000479162 SETD5Q9C0A6 1442 aa12.07□□□□□ -0.48
NUP35-209ENST00000479162 ERLIN1O75477 346 aa12.06□□□□□ -0.48
NUP35-209ENST00000479162 CEP135Q66GS9 1140 aa12.06□□□□□ -0.48
NUP35-209ENST00000479162 RCSD1Q6JBY9 416 aa12.06□□□□□ -0.48
NUP35-209ENST00000479162 ARHGAP22Q7Z5H3 698 aa12.06□□□□□ -0.48
NUP35-209ENST00000479162 NUP133Q8WUM0 1156 aa12.06□□□□□ -0.48
NUP35-209ENST00000479162 SPDL1Q96EA4 605 aa12.06□□□□□ -0.48
NUP35-209ENST00000479162 TRIM4Q9C037 500 aa12.06□□□□□ -0.48
NUP35-209ENST00000479162 NOS1P29475 1434 aa12.06□□□□□ -0.48
NUP35-209ENST00000479162 LRPPRCP42704 1394 aaKnown RBP12.06□□□□□ -0.48
NUP35-209ENST00000479162 ENO4A6NNW6 628 aa12.06□□□□□ -0.48
NUP35-209ENST00000479162 COPB2P35606 906 aa12.06□□□□□ -0.48
NUP35-209ENST00000479162 FBXW10Q5XX13 1052 aa12.06□□□□□ -0.48
NUP35-209ENST00000479162 EPAS1Q99814 870 aa12.06□□□□□ -0.48
NUP35-209ENST00000479162 BARX2Q9UMQ3 279 aaPredicted RBP12.06□□□□□ -0.48
NUP35-209ENST00000479162 PLA2R1Q13018 1463 aa12.06□□□□□ -0.48
NUP35-209ENST00000479162 SKAP2O75563 359 aaPredicted RBP12.06□□□□□ -0.48
NUP35-209ENST00000479162 EIF4G2P78344 907 aaKnown RBP eCLIP12.06□□□□□ -0.48
NUP35-209ENST00000479162 WLSQ5T9L3 541 aa12.06□□□□□ -0.48
NUP35-209ENST00000479162 CCDC65Q8IXS2 484 aa12.06□□□□□ -0.48
NUP35-209ENST00000479162 RSPH1Q8WYR4 309 aa12.06□□□□□ -0.48
NUP35-209ENST00000479162 ANKRD36BQ8N2N9 1353 aa12.05□□□□□ -0.48
NUP35-209ENST00000479162 ERC2O15083 957 aa12.05□□□□□ -0.48
NUP35-209ENST00000479162 MBD3O95983 291 aa12.05□□□□□ -0.48
NUP35-209ENST00000479162 SLC8A3P57103 927 aa12.05□□□□□ -0.48
NUP35-209ENST00000479162 NAA25Q14CX7 972 aa12.05□□□□□ -0.48
NUP35-209ENST00000479162 LRRC23Q53EV4 343 aaPredicted RBP12.05□□□□□ -0.48
NUP35-209ENST00000479162 MFN1Q8IWA4 741 aa12.05□□□□□ -0.48
NUP35-209ENST00000479162 GPCPD1Q9NPB8 672 aa12.05□□□□□ -0.48
NUP35-209ENST00000479162 TRPM2O94759 1503 aa12.05□□□□□ -0.48
NUP35-209ENST00000479162 HMMRO75330 724 aa12.05□□□□□ -0.48
NUP35-209ENST00000479162 KCNN1Q92952 543 aa12.05□□□□□ -0.48
NUP35-209ENST00000479162 INCENPQ9NQS7 918 aa12.05□□□□□ -0.48
NUP35-209ENST00000479162 IFT57Q9NWB7 429 aa12.05□□□□□ -0.48
NUP35-209ENST00000479162 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.05□□□□□ -0.48
NUP35-209ENST00000479162 EIF3AQ14152 1382 aaKnown RBP12.04□□□□□ -0.48
NUP35-209ENST00000479162 PTPRTO14522 1441 aa12.04□□□□□ -0.48
NUP35-209ENST00000479162 LRRC10BA6NIK2 292 aa12.04□□□□□ -0.48
NUP35-209ENST00000479162 SPDYE3A6NKU9 549 aa12.04□□□□□ -0.48
NUP35-209ENST00000479162 HMGB1P1B2RPK0 211 aaPredicted RBP12.04□□□□□ -0.48
NUP35-209ENST00000479162 MMEP08473 750 aa12.04□□□□□ -0.48
NUP35-209ENST00000479162 HARSP12081 509 aaKnown RBP12.04□□□□□ -0.48
NUP35-209ENST00000479162 HOXA10P31260 410 aaPredicted RBP12.04□□□□□ -0.48
NUP35-209ENST00000479162 POTEDQ86YR6 584 aa12.04□□□□□ -0.48
NUP35-209ENST00000479162 HDAC7Q8WUI4 952 aa12.04□□□□□ -0.48
NUP35-209ENST00000479162 MAPK8IP1Q9UQF2 711 aa12.04□□□□□ -0.48
NUP35-209ENST00000479162 KDRP35968 1356 aa12.04□□□□□ -0.48
NUP35-209ENST00000479162 A2ML1A8K2U0 1454 aa12.04□□□□□ -0.48
NUP35-209ENST00000479162 SYNMO15061 1565 aa12.04□□□□□ -0.48
NUP35-209ENST00000479162 CEP170BQ9Y4F5 1589 aaPredicted RBP12.04□□□□□ -0.48
NUP35-209ENST00000479162 LIG3P49916 1009 aa12.04□□□□□ -0.48
NUP35-209ENST00000479162 ANKRD13BQ86YJ7 626 aa12.04□□□□□ -0.48
NUP35-209ENST00000479162 OR8K1Q8NGG5 319 aa12.04□□□□□ -0.48
NUP35-209ENST00000479162 UBAP1Q9NZ09 502 aa12.04□□□□□ -0.48
NUP35-209ENST00000479162 UBR1Q8IWV7 1749 aa12.03□□□□□ -0.48
NUP35-209ENST00000479162 FRMD3A2A2Y4 597 aa12.03□□□□□ -0.48
NUP35-209ENST00000479162 AHCYL1O43865 530 aa12.03□□□□□ -0.48
NUP35-209ENST00000479162 PRPF40AO75400 957 aaKnown RBP12.03□□□□□ -0.48
NUP35-209ENST00000479162 FILIP1Q7Z7B0 1213 aa12.03□□□□□ -0.48
NUP35-209ENST00000479162 BICD2Q8TD16 824 aa12.03□□□□□ -0.48
NUP35-209ENST00000479162 HDAC6Q9UBN7 1215 aa12.03□□□□□ -0.48
NUP35-209ENST00000479162 POLR1AO95602 1720 aaPredicted RBP12.03□□□□□ -0.48
NUP35-209ENST00000479162 GOLGA6L10A6NI86 522 aa12.03□□□□□ -0.48
NUP35-209ENST00000479162 MAP4K4O95819 1239 aaPredicted RBP12.03□□□□□ -0.48
NUP35-209ENST00000479162 LMNB1P20700 586 aa12.03□□□□□ -0.48
NUP35-209ENST00000479162 KCNB1Q14721 858 aa12.03□□□□□ -0.48
NUP35-209ENST00000479162 ATP11CQ8NB49 1132 aa12.03□□□□□ -0.48
NUP35-209ENST00000479162 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.03□□□□□ -0.48
NUP35-209ENST00000479162 TPD52L1Q16890 204 aaPredicted RBP12.02□□□□□ -0.48
NUP35-209ENST00000479162 KBTBD12Q3ZCT8 623 aa12.02□□□□□ -0.48
NUP35-209ENST00000479162 BATF3Q9NR55 127 aa12.02□□□□□ -0.48
NUP35-209ENST00000479162 ADGRB3O60242 1522 aa12.02□□□□□ -0.48
NUP35-209ENST00000479162 FESP07332 822 aa12.02□□□□□ -0.49
NUP35-209ENST00000479162 ADCY1Q08828 1119 aa12.02□□□□□ -0.49
NUP35-209ENST00000479162 POSTNQ15063 836 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms