RNA–Protein interactions for RNA: ENST00000478139.1

SYCP3-204, Transcript of synaptonemal complex protein 3, humanhuman

TSL 2

Gene SYCP3, Length 3,690 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-204ENST00000478139 CRAMP1Q96RY5 1269 aa9.15□□□□□ -0.94
SYCP3-204ENST00000478139 GOLGA6L22H0YM25 854 aa9.15□□□□□ -0.95
SYCP3-204ENST00000478139 RAD21O60216 631 aa9.15□□□□□ -0.95
SYCP3-204ENST00000478139 WDHD1O75717 1129 aaPredicted RBP9.15□□□□□ -0.95
SYCP3-204ENST00000478139 ZSCAN25Q6NSZ9 544 aa9.15□□□□□ -0.95
SYCP3-204ENST00000478139 NAP1L2Q9ULW6 460 aaPredicted RBP9.15□□□□□ -0.95
SYCP3-204ENST00000478139 BRPF1P55201 1214 aaPredicted RBP9.14□□□□□ -0.95
SYCP3-204ENST00000478139 ATP8B2P98198 1209 aa9.14□□□□□ -0.95
SYCP3-204ENST00000478139 PLEKHM2Q8IWE5 1019 aa9.14□□□□□ -0.95
SYCP3-204ENST00000478139 ZNF408Q9H9D4 720 aa9.14□□□□□ -0.95
SYCP3-204ENST00000478139 LEMD3Q9Y2U8 911 aa9.14□□□□□ -0.95
SYCP3-204ENST00000478139 MAP3K12Q12852 859 aa9.14□□□□□ -0.95
SYCP3-204ENST00000478139 RUFY2Q8WXA3 655 aa9.14□□□□□ -0.95
SYCP3-204ENST00000478139 USP44Q9H0E7 712 aa9.14□□□□□ -0.95
SYCP3-204ENST00000478139 VEZTQ9HBM0 779 aa9.14□□□□□ -0.95
SYCP3-204ENST00000478139 ZNF277Q9NRM2 450 aaPredicted RBP9.14□□□□□ -0.95
SYCP3-204ENST00000478139 MROH5Q6ZUA9 1318 aa9.14□□□□□ -0.95
SYCP3-204ENST00000478139 PEAK1Q9H792 1746 aa9.14□□□□□ -0.95
SYCP3-204ENST00000478139 RGL2O15211 777 aa9.13□□□□□ -0.95
SYCP3-204ENST00000478139 YY1P25490 414 aa9.13□□□□□ -0.95
SYCP3-204ENST00000478139 PUM3Q15397 648 aaKnown RBP9.13□□□□□ -0.95
SYCP3-204ENST00000478139 CIAPIN1Q6FI81 312 aa9.13□□□□□ -0.95
SYCP3-204ENST00000478139 CHAMP1Q96JM3 812 aa9.13□□□□□ -0.95
SYCP3-204ENST00000478139 SNRKQ9NRH2 765 aa9.13□□□□□ -0.95
SYCP3-204ENST00000478139 JAG2Q9Y219 1238 aa9.13□□□□□ -0.95
SYCP3-204ENST00000478139 RGPD5Q99666 1765 aa9.13□□□□□ -0.95
SYCP3-204ENST00000478139 H7C1W4 665 aa9.13□□□□□ -0.95
SYCP3-204ENST00000478139 RAD17O75943 681 aa9.13□□□□□ -0.95
SYCP3-204ENST00000478139 IGKV5-2P06315 115 aa9.13□□□□□ -0.95
SYCP3-204ENST00000478139 CAVIN1Q6NZI2 390 aaKnown RBP9.13□□□□□ -0.95
SYCP3-204ENST00000478139 TTLL11Q8NHH1 800 aa9.13□□□□□ -0.95
SYCP3-204ENST00000478139 KLHDC4Q8TBB5 520 aa9.13□□□□□ -0.95
SYCP3-204ENST00000478139 SMARCA5O60264 1052 aaPredicted RBP9.13□□□□□ -0.95
SYCP3-204ENST00000478139 NTSR2O95665 410 aa9.13□□□□□ -0.95
SYCP3-204ENST00000478139 HMGB1P09429 215 aaKnown RBP9.13□□□□□ -0.95
SYCP3-204ENST00000478139 GTF2IP78347 998 aa9.13□□□□□ -0.95
SYCP3-204ENST00000478139 CHRNDQ07001 517 aa9.13□□□□□ -0.95
SYCP3-204ENST00000478139 DBNDD1Q9H9R9 158 aa9.13□□□□□ -0.95
SYCP3-204ENST00000478139 CWC22Q9HCG8 908 aaKnown RBP9.13□□□□□ -0.95
SYCP3-204ENST00000478139 ZNF804BA4D1E1 1349 aa9.13□□□□□ -0.95
SYCP3-204ENST00000478139 PDIA6Q15084 440 aa9.12□□□□□ -0.95
SYCP3-204ENST00000478139 KLHL40Q2TBA0 621 aa9.12□□□□□ -0.95
SYCP3-204ENST00000478139 C9orf131Q5VYM1 1079 aa9.12□□□□□ -0.95
SYCP3-204ENST00000478139 CTDP1Q9Y5B0 961 aaPredicted RBP9.12□□□□□ -0.95
SYCP3-204ENST00000478139 BAG3O95817 575 aa9.12□□□□□ -0.95
SYCP3-204ENST00000478139 LMNB1P20700 586 aa9.12□□□□□ -0.95
SYCP3-204ENST00000478139 PTMSP20962 102 aa9.12□□□□□ -0.95
SYCP3-204ENST00000478139 MCCP23508 829 aa9.12□□□□□ -0.95
SYCP3-204ENST00000478139 TTC22Q5TAA0 569 aa9.12□□□□□ -0.95
SYCP3-204ENST00000478139 TTLL5Q6EMB2 1281 aa9.12□□□□□ -0.95
SYCP3-204ENST00000478139 SP8Q8IXZ3 490 aa9.12□□□□□ -0.95
SYCP3-204ENST00000478139 CELF1Q92879 486 aaKnown RBP9.12□□□□□ -0.95
SYCP3-204ENST00000478139 GSTO1P78417 241 aa9.12□□□□□ -0.95
SYCP3-204ENST00000478139 CCDC173Q0VFZ6 552 aa9.12□□□□□ -0.95
SYCP3-204ENST00000478139 LPIN2Q92539 896 aa9.12□□□□□ -0.95
SYCP3-204ENST00000478139 IQCA1LA6NCM1 817 aa9.11□□□□□ -0.95
SYCP3-204ENST00000478139 SRGNP10124 158 aa9.11□□□□□ -0.95
SYCP3-204ENST00000478139 USP5P45974 858 aa9.11□□□□□ -0.95
SYCP3-204ENST00000478139 RABEP1Q15276 862 aa9.11□□□□□ -0.95
SYCP3-204ENST00000478139 DLGAP5Q15398 846 aa9.11□□□□□ -0.95
SYCP3-204ENST00000478139 FOXD4L5Q5VV16 416 aaPredicted RBP9.11□□□□□ -0.95
SYCP3-204ENST00000478139 CNTROBQ8N137 903 aa9.11□□□□□ -0.95
SYCP3-204ENST00000478139 CRACR2BQ8N4Y2 399 aaPredicted RBP9.11□□□□□ -0.95
SYCP3-204ENST00000478139 FOXD4L4Q8WXT5 416 aaPredicted RBP9.11□□□□□ -0.95
SYCP3-204ENST00000478139 BOLA2Q9H3K6 86 aa9.11□□□□□ -0.95
SYCP3-204ENST00000478139 CDHR2Q9BYE9 1310 aa9.11□□□□□ -0.95
SYCP3-204ENST00000478139 LMO7Q8WWI1 1683 aa9.11□□□□□ -0.95
SYCP3-204ENST00000478139 DLG5Q8TDM6 1919 aa9.11□□□□□ -0.95
SYCP3-204ENST00000478139 LDHBP07195 334 aaKnown RBP9.11□□□□□ -0.95
SYCP3-204ENST00000478139 TM4SF1P30408 202 aa9.11□□□□□ -0.95
SYCP3-204ENST00000478139 UBE4AQ14139 1066 aa9.11□□□□□ -0.95
SYCP3-204ENST00000478139 SF3B3Q15393 1217 aaKnown RBP9.11□□□□□ -0.95
SYCP3-204ENST00000478139 ANKRD44Q8N8A2 993 aa9.11□□□□□ -0.95
SYCP3-204ENST00000478139 WDR66Q8TBY9 1149 aa9.11□□□□□ -0.95
SYCP3-204ENST00000478139 RHPN1Q8TCX5 695 aa9.11□□□□□ -0.95
SYCP3-204ENST00000478139 TBC1D22AQ8WUA7 517 aa9.11□□□□□ -0.95
SYCP3-204ENST00000478139 BSDC1Q9NW68 430 aaPredicted RBP9.11□□□□□ -0.95
SYCP3-204ENST00000478139 TNNI2P48788 182 aa9.11□□□□□ -0.95
SYCP3-204ENST00000478139 ANP32BQ92688 251 aaKnown RBP9.11□□□□□ -0.95
SYCP3-204ENST00000478139 USP26Q9BXU7 913 aa9.11□□□□□ -0.95
SYCP3-204ENST00000478139 ZMYND15Q9H091 742 aa9.11□□□□□ -0.95
SYCP3-204ENST00000478139 RBM27Q9P2N5 1060 aaKnown RBP9.11□□□□□ -0.95
SYCP3-204ENST00000478139 DENND2AQ9ULE3 1009 aa9.11□□□□□ -0.95
SYCP3-204ENST00000478139 ATP6V0A2Q9Y487 856 aa9.11□□□□□ -0.95
SYCP3-204ENST00000478139 MAST3O60307 1309 aa9.1□□□□□ -0.95
SYCP3-204ENST00000478139 RRP9O43818 475 aaKnown RBP9.1□□□□□ -0.95
SYCP3-204ENST00000478139 SDSP20132 328 aa9.1□□□□□ -0.95
SYCP3-204ENST00000478139 IARSP41252 1262 aaKnown RBP9.1□□□□□ -0.95
SYCP3-204ENST00000478139 TIMM10P62072 90 aa9.1□□□□□ -0.95
SYCP3-204ENST00000478139 TFCP2Q12800 502 aa9.1□□□□□ -0.95
SYCP3-204ENST00000478139 CCAR1Q8IX12 1150 aaKnown RBP9.1□□□□□ -0.95
SYCP3-204ENST00000478139 NACAP1Q9BZK3 213 aa9.1□□□□□ -0.95
SYCP3-204ENST00000478139 DCTPP1Q9H773 170 aa9.1□□□□□ -0.95
SYCP3-204ENST00000478139 TTF1Q15361 905 aaPredicted RBP9.1□□□□□ -0.95
SYCP3-204ENST00000478139 AOC3Q16853 763 aa9.1□□□□□ -0.95
SYCP3-204ENST00000478139 ZSCAN23Q3MJ62 389 aa9.1□□□□□ -0.95
SYCP3-204ENST00000478139 SULF1Q8IWU6 871 aa9.1□□□□□ -0.95
SYCP3-204ENST00000478139 NLGN2Q8NFZ4 835 aa9.1□□□□□ -0.95
SYCP3-204ENST00000478139 PPP1R9BQ96SB3 815 aa9.1□□□□□ -0.95
SYCP3-204ENST00000478139 UBN2Q6ZU65 1347 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms