RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 CCT4P50991 539 aaKnown RBP21.41■■□□□ 1.02
TRIM13-208ENST00000478111 ANGEL2Q5VTE6 544 aaKnown RBP21.41■■□□□ 1.02
TRIM13-208ENST00000478111 CDCA5Q96FF9 252 aa21.41■■□□□ 1.02
TRIM13-208ENST00000478111 MYOZ2Q9NPC6 264 aa21.41■■□□□ 1.02
TRIM13-208ENST00000478111 AKAP11Q9UKA4 1901 aa21.4■■□□□ 1.02
TRIM13-208ENST00000478111 TXNRD3Q86VQ6 643 aa21.4■■□□□ 1.02
TRIM13-208ENST00000478111 VAMP4O75379 141 aa21.39■■□□□ 1.01
TRIM13-208ENST00000478111 CSF1RP07333 972 aa21.39■■□□□ 1.01
TRIM13-208ENST00000478111 DACT2Q5SW24 774 aa21.39■■□□□ 1.01
TRIM13-208ENST00000478111 DNAAF4Q8WXU2 420 aa21.39■■□□□ 1.01
TRIM13-208ENST00000478111 CCDC102AQ96A19 550 aa21.39■■□□□ 1.01
TRIM13-208ENST00000478111 MXD3Q9BW11 206 aa21.39■■□□□ 1.01
TRIM13-208ENST00000478111 ZNF157P51786 506 aaPredicted RBP21.38■■□□□ 1.01
TRIM13-208ENST00000478111 KIF23Q02241 960 aaPredicted RBP21.38■■□□□ 1.01
TRIM13-208ENST00000478111 MRS2Q9HD23 443 aa21.38■■□□□ 1.01
TRIM13-208ENST00000478111 PITPNM2Q9BZ72 1349 aa21.37■■□□□ 1.01
TRIM13-208ENST00000478111 ITGA6P23229 1130 aa21.37■■□□□ 1.01
TRIM13-208ENST00000478111 FKBP5Q13451 457 aaPredicted RBP21.37■■□□□ 1.01
TRIM13-208ENST00000478111 FAM161AQ3B820 660 aa21.37■■□□□ 1.01
TRIM13-208ENST00000478111 WDR63Q8IWG1 891 aa21.37■■□□□ 1.01
TRIM13-208ENST00000478111 LINS1Q8NG48 757 aa21.37■■□□□ 1.01
TRIM13-208ENST00000478111 LEMD3Q9Y2U8 911 aa21.37■■□□□ 1.01
TRIM13-208ENST00000478111 A0A1B0GUL6 1792 aa21.36■■□□□ 1.01
TRIM13-208ENST00000478111 SLC10A3P09131 477 aa21.36■■□□□ 1.01
TRIM13-208ENST00000478111 KLRK1P26718 216 aa21.36■■□□□ 1.01
TRIM13-208ENST00000478111 IGHMBP2P38935 993 aaKnown RBP21.36■■□□□ 1.01
TRIM13-208ENST00000478111 EXOSC9Q06265 439 aaKnown RBP21.36■■□□□ 1.01
TRIM13-208ENST00000478111 NBPF9Q3BBW0 867 aa21.36■■□□□ 1.01
TRIM13-208ENST00000478111 COA1Q9GZY4 146 aa21.36■■□□□ 1.01
TRIM13-208ENST00000478111 SCAF8Q9UPN6 1271 aaKnown RBP21.36■■□□□ 1.01
TRIM13-208ENST00000478111 STRIP1Q5VSL9 837 aa21.35■■□□□ 1.01
TRIM13-208ENST00000478111 MCOLN1Q9GZU1 580 aa21.35■■□□□ 1.01
TRIM13-208ENST00000478111 SPINK5Q9NQ38 1064 aaPredicted RBP21.35■■□□□ 1.01
TRIM13-208ENST00000478111 SALL2Q9Y467 1007 aaPredicted RBP21.35■■□□□ 1.01
TRIM13-208ENST00000478111 PAPPA2Q9BXP8 1791 aa21.35■■□□□ 1.01
TRIM13-208ENST00000478111 ZNF804BA4D1E1 1349 aa21.34■■□□□ 1.01
TRIM13-208ENST00000478111 CSRNP1Q96S65 589 aa21.34■■□□□ 1.01
TRIM13-208ENST00000478111 ANKRD2Q9GZV1 360 aa21.34■■□□□ 1.01
TRIM13-208ENST00000478111 MYH16Q9H6N6 1097 aa21.34■■□□□ 1.01
TRIM13-208ENST00000478111 SAGE1Q9NXZ1 904 aa21.33■■□□□ 1.01
TRIM13-208ENST00000478111 MYO3BQ8WXR4 1341 aa21.32■■□□□ 1
TRIM13-208ENST00000478111 IRS2Q9Y4H2 1338 aa21.32■■□□□ 1
TRIM13-208ENST00000478111 CCDC85CA6NKD9 419 aa21.32■■□□□ 1
TRIM13-208ENST00000478111 WNT10BO00744 389 aa21.32■■□□□ 1
TRIM13-208ENST00000478111 FKBP1BP68106 108 aa21.32■■□□□ 1
TRIM13-208ENST00000478111 FOXO4P98177 505 aa21.32■■□□□ 1
TRIM13-208ENST00000478111 MOB2Q70IA6 237 aa21.32■■□□□ 1
TRIM13-208ENST00000478111 RASAL3Q86YV0 1011 aa21.32■■□□□ 1
TRIM13-208ENST00000478111 MPHOSPH8Q99549 860 aa21.32■■□□□ 1
TRIM13-208ENST00000478111 RNF186Q9NXI6 227 aa21.32■■□□□ 1
TRIM13-208ENST00000478111 TNRC18O15417 2968 aaPredicted RBP21.31■■□□□ 1
TRIM13-208ENST00000478111 F6X3S4 739 aa21.31■■□□□ 1
TRIM13-208ENST00000478111 RGS19P49795 217 aa21.31■■□□□ 1
TRIM13-208ENST00000478111 CHRNDQ07001 517 aa21.31■■□□□ 1
TRIM13-208ENST00000478111 BEND3Q5T5X7 828 aa21.31■■□□□ 1
TRIM13-208ENST00000478111 PRAMEF18Q5VWM3 479 aa21.31■■□□□ 1
TRIM13-208ENST00000478111 TTLL5Q6EMB2 1281 aa21.31■■□□□ 1
TRIM13-208ENST00000478111 SNAP23O00161 211 aa21.3■■□□□ 1
TRIM13-208ENST00000478111 ANP32CO43423 234 aa21.3■■□□□ 1
TRIM13-208ENST00000478111 TRPA1O75762 1119 aa21.3■■□□□ 1
TRIM13-208ENST00000478111 DGKZQ13574 1117 aa21.3■■□□□ 1
TRIM13-208ENST00000478111 OGFOD1Q8N543 542 aa21.3■■□□□ 1
TRIM13-208ENST00000478111 FBXW7Q969H0 707 aa21.3■■□□□ 1
TRIM13-208ENST00000478111 ANKRD18BA2A2Z9 1011 aa21.29■■□□□ 1
TRIM13-208ENST00000478111 MMP14P50281 582 aa21.29■■□□□ 1
TRIM13-208ENST00000478111 ZBED3Q96IU2 234 aaPredicted RBP21.29■■□□□ 1
TRIM13-208ENST00000478111 UBE2Q2LH0YL09 131 aa21.28■■□□□ 1
TRIM13-208ENST00000478111 TAF5LO75529 589 aa21.28■■□□□ 1
TRIM13-208ENST00000478111 SASH1O94885 1247 aa21.28■■□□□ 1
TRIM13-208ENST00000478111 GTF2IP78347 998 aa21.28■■□□□ 1
TRIM13-208ENST00000478111 EPHA10Q5JZY3 1008 aa21.28■■□□□ 1
TRIM13-208ENST00000478111 CD209Q9NNX6 404 aa21.28■■□□□ 1
TRIM13-208ENST00000478111 C15orf52Q6ZUT6 534 aaKnown RBP21.27■■□□□ 1
TRIM13-208ENST00000478111 KIAA0825Q8IV33 1275 aa21.27■■□□□ 1
TRIM13-208ENST00000478111 HELBQ8NG08 1087 aaPredicted RBP21.27■■□□□ 1
TRIM13-208ENST00000478111 ZNF316A6NFI3 1004 aaPredicted RBP21.26■□□□□ 0.99
TRIM13-208ENST00000478111 REM2Q8IYK8 340 aaPredicted RBP21.26■□□□□ 0.99
TRIM13-208ENST00000478111 ECM29Q5VYK3 1845 aa21.26■□□□□ 0.99
TRIM13-208ENST00000478111 KCNJ4P48050 445 aa21.25■□□□□ 0.99
TRIM13-208ENST00000478111 IFIT5Q13325 482 aaKnown RBP21.25■□□□□ 0.99
TRIM13-208ENST00000478111 LMBR1LQ6UX01 489 aa21.25■□□□□ 0.99
TRIM13-208ENST00000478111 CERS5Q8N5B7 392 aa21.25■□□□□ 0.99
TRIM13-208ENST00000478111 ZNF594Q96JF6 807 aaPredicted RBP21.24■□□□□ 0.99
TRIM13-208ENST00000478111 GRM8O00222 908 aa21.23■□□□□ 0.99
TRIM13-208ENST00000478111 IL1R1P14778 569 aa21.23■□□□□ 0.99
TRIM13-208ENST00000478111 HDAC9Q9UKV0 1011 aa21.23■□□□□ 0.99
TRIM13-208ENST00000478111 ZEB1P37275 1124 aaPredicted RBP21.22■□□□□ 0.99
TRIM13-208ENST00000478111 MLLT1Q03111 559 aaPredicted RBP21.22■□□□□ 0.99
TRIM13-208ENST00000478111 CHMP3Q9Y3E7 222 aa21.22■□□□□ 0.99
TRIM13-208ENST00000478111 TTLL12Q14166 644 aaPredicted RBP21.21■□□□□ 0.99
TRIM13-208ENST00000478111 APOBEC3FQ8IUX4 373 aaKnown RBP21.21■□□□□ 0.99
TRIM13-208ENST00000478111 FAM9BQ8IZU0 186 aa21.21■□□□□ 0.99
TRIM13-208ENST00000478111 MTMR14Q8NCE2 650 aa21.21■□□□□ 0.99
TRIM13-208ENST00000478111 PCDHAC2Q9Y5I4 1007 aa21.21■□□□□ 0.99
TRIM13-208ENST00000478111 ALDH1L1O75891 902 aa21.2■□□□□ 0.98
TRIM13-208ENST00000478111 TM4SF4P48230 202 aa21.2■□□□□ 0.98
TRIM13-208ENST00000478111 PTPN12Q05209 780 aaKnown RBP21.2■□□□□ 0.98
TRIM13-208ENST00000478111 KAZALD1Q96I82 304 aa21.2■□□□□ 0.98
TRIM13-208ENST00000478111 NF2P35240 595 aa21.19■□□□□ 0.98
TRIM13-208ENST00000478111 CCDC57Q2TAC2 916 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms