RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 CCDC7Q96M83 1385 aa9.59□□□□□ -0.87
USP33-208ENST00000477949 CELA2BP08218 269 aaPredicted RBP9.58□□□□□ -0.88
USP33-208ENST00000477949 HTRA3P83110 453 aa9.58□□□□□ -0.88
USP33-208ENST00000477949 DBN1Q16643 649 aa9.58□□□□□ -0.88
USP33-208ENST00000477949 ARHGEF25Q86VW2 580 aa9.58□□□□□ -0.88
USP33-208ENST00000477949 ZNF592Q92610 1267 aa9.58□□□□□ -0.88
USP33-208ENST00000477949 NLRP3Q96P20 1036 aa9.58□□□□□ -0.88
USP33-208ENST00000477949 MPHOSPH9Q99550 1183 aa9.58□□□□□ -0.88
USP33-208ENST00000477949 DYRK1BQ9Y463 629 aa9.58□□□□□ -0.88
USP33-208ENST00000477949 H7C1W4 665 aa9.57□□□□□ -0.88
USP33-208ENST00000477949 TOMM70O94826 608 aa9.57□□□□□ -0.88
USP33-208ENST00000477949 SLC27A3Q5K4L6 730 aa9.57□□□□□ -0.88
USP33-208ENST00000477949 RIPOR1Q6ZS17 1223 aa9.57□□□□□ -0.88
USP33-208ENST00000477949 IL27Q8NEV9 243 aa9.57□□□□□ -0.88
USP33-208ENST00000477949 ZNF837Q96EG3 531 aaPredicted RBP9.57□□□□□ -0.88
USP33-208ENST00000477949 WWC3Q9ULE0 1092 aa9.57□□□□□ -0.88
USP33-208ENST00000477949 DNMT3AQ9Y6K1 912 aaPredicted RBP9.57□□□□□ -0.88
USP33-208ENST00000477949 NSD2O96028 1365 aa9.57□□□□□ -0.88
USP33-208ENST00000477949 ZBTB7CA1YPR0 619 aa9.56□□□□□ -0.88
USP33-208ENST00000477949 KCNQ4P56696 695 aa9.56□□□□□ -0.88
USP33-208ENST00000477949 POU4F2Q12837 409 aa9.56□□□□□ -0.88
USP33-208ENST00000477949 NR1H3Q13133 447 aa9.56□□□□□ -0.88
USP33-208ENST00000477949 GRIP2Q9C0E4 1043 aa9.56□□□□□ -0.88
USP33-208ENST00000477949 MBIPQ9NS73 344 aa9.56□□□□□ -0.88
USP33-208ENST00000477949 CD2APQ9Y5K6 639 aa9.56□□□□□ -0.88
USP33-208ENST00000477949 USP54Q70EL1 1684 aa9.55□□□□□ -0.88
USP33-208ENST00000477949 IGHA1P01876 353 aa9.55□□□□□ -0.88
USP33-208ENST00000477949 WDR44Q5JSH3 913 aa9.55□□□□□ -0.88
USP33-208ENST00000477949 COL23A1Q86Y22 540 aaPredicted RBP9.55□□□□□ -0.88
USP33-208ENST00000477949 ZNF330Q9Y3S2 320 aaPredicted RBP9.55□□□□□ -0.88
USP33-208ENST00000477949 KAT6BQ8WYB5 2073 aa9.54□□□□□ -0.88
USP33-208ENST00000477949 KIAA1551Q9HCM1 1747 aa9.54□□□□□ -0.88
USP33-208ENST00000477949 CLN3Q13286 438 aa9.54□□□□□ -0.88
USP33-208ENST00000477949 CYP2U1Q7Z449 544 aa9.54□□□□□ -0.88
USP33-208ENST00000477949 GAS2L1Q99501 681 aaPredicted RBP9.54□□□□□ -0.88
USP33-208ENST00000477949 TFCP2L1Q9NZI6 479 aa9.54□□□□□ -0.88
USP33-208ENST00000477949 DOT1LQ8TEK3 1739 aa9.53□□□□□ -0.88
USP33-208ENST00000477949 TOGARAM1Q9Y4F4 1720 aa9.53□□□□□ -0.88
USP33-208ENST00000477949 GPR25O00155 361 aa9.53□□□□□ -0.88
USP33-208ENST00000477949 FOXK2Q01167 660 aa9.53□□□□□ -0.88
USP33-208ENST00000477949 NEUROD2Q15784 382 aa9.53□□□□□ -0.88
USP33-208ENST00000477949 MSL1Q68DK7 614 aa9.53□□□□□ -0.88
USP33-208ENST00000477949 BANK1Q8NDB2 785 aa9.53□□□□□ -0.88
USP33-208ENST00000477949 GTPBP3Q969Y2 492 aaKnown RBP9.53□□□□□ -0.88
USP33-208ENST00000477949 NMRK2Q9NPI5 230 aa9.53□□□□□ -0.88
USP33-208ENST00000477949 KIAA1210Q9ULL0 1709 aa9.53□□□□□ -0.88
USP33-208ENST00000477949 SPATA31C2B4DYI2 1134 aa9.52□□□□□ -0.89
USP33-208ENST00000477949 GPAT2Q6NUI2 795 aa9.52□□□□□ -0.89
USP33-208ENST00000477949 NBPF10Q6P3W6 841 aaKnown RBP9.52□□□□□ -0.89
USP33-208ENST00000477949 NBPF15Q8N660 670 aa9.52□□□□□ -0.89
USP33-208ENST00000477949 TRERF1Q96PN7 1200 aa9.52□□□□□ -0.89
USP33-208ENST00000477949 PCDHB11Q9Y5F2 797 aa9.52□□□□□ -0.89
USP33-208ENST00000477949 IGSF1Q8N6C5 1336 aa9.52□□□□□ -0.89
USP33-208ENST00000477949 SCTRP47872 440 aa9.51□□□□□ -0.89
USP33-208ENST00000477949 PPARGC1BQ86YN6 1023 aaKnown RBP9.51□□□□□ -0.89
USP33-208ENST00000477949 C5P01031 1676 aa9.51□□□□□ -0.89
USP33-208ENST00000477949 TAF1LQ8IZX4 1826 aa9.5□□□□□ -0.89
USP33-208ENST00000477949 KIF13BQ9NQT8 1826 aa9.5□□□□□ -0.89
USP33-208ENST00000477949 TRAK2O60296 914 aa9.5□□□□□ -0.89
USP33-208ENST00000477949 CSB-PGBD3P0DP91 1061 aa9.5□□□□□ -0.89
USP33-208ENST00000477949 BCRP11274 1271 aa9.5□□□□□ -0.89
USP33-208ENST00000477949 IL2RBP14784 551 aa9.5□□□□□ -0.89
USP33-208ENST00000477949 BEND7Q8N7W2 519 aaPredicted RBP9.5□□□□□ -0.89
USP33-208ENST00000477949 OSBPL3Q9H4L5 887 aa9.5□□□□□ -0.89
USP33-208ENST00000477949 TIMMDC1Q9NPL8 285 aa9.5□□□□□ -0.89
USP33-208ENST00000477949 ANKRD36BQ8N2N9 1353 aa9.5□□□□□ -0.89
USP33-208ENST00000477949 C10orf71Q711Q0 1435 aa9.49□□□□□ -0.89
USP33-208ENST00000477949 PHF20L1A8MW92 1017 aa9.49□□□□□ -0.89
USP33-208ENST00000477949 F11P03951 625 aa9.49□□□□□ -0.89
USP33-208ENST00000477949 TAS1R3Q7RTX0 852 aa9.49□□□□□ -0.89
USP33-208ENST00000477949 PDE4DIPQ5VU43 2346 aa9.49□□□□□ -0.89
USP33-208ENST00000477949 GNRH1P01148 92 aa9.48□□□□□ -0.89
USP33-208ENST00000477949 HSPA1AP0DMV8 641 aaKnown RBP9.48□□□□□ -0.89
USP33-208ENST00000477949 HSPA1BP0DMV9 641 aaKnown RBP9.48□□□□□ -0.89
USP33-208ENST00000477949 FSTL1Q12841 308 aa9.48□□□□□ -0.89
USP33-208ENST00000477949 AMIGO3Q86WK7 504 aa9.48□□□□□ -0.89
USP33-208ENST00000477949 KCNH5Q8NCM2 988 aa9.48□□□□□ -0.89
USP33-208ENST00000477949 NEDD1Q8NHV4 660 aa9.48□□□□□ -0.89
USP33-208ENST00000477949 ARHGEF10LQ9HCE6 1279 aa9.48□□□□□ -0.89
USP33-208ENST00000477949 NSFL1CQ9UNZ2 370 aaKnown RBP9.48□□□□□ -0.89
USP33-208ENST00000477949 PKD1L3Q7Z443 1732 aa9.48□□□□□ -0.89
USP33-208ENST00000477949 PXDNLA1KZ92 1463 aa9.47□□□□□ -0.89
USP33-208ENST00000477949 BRCA1P38398 1863 aaKnown RBP9.47□□□□□ -0.89
USP33-208ENST00000477949 UBR3Q6ZT12 1888 aa9.47□□□□□ -0.89
USP33-208ENST00000477949 MX2P20592 715 aa9.47□□□□□ -0.89
USP33-208ENST00000477949 ACDQ96AP0 544 aa9.47□□□□□ -0.89
USP33-208ENST00000477949 CABP1Q9NZU7 370 aa9.47□□□□□ -0.89
USP33-208ENST00000477949 NDUFB9Q9Y6M9 179 aa9.47□□□□□ -0.89
USP33-208ENST00000477949 FAM208AQ9UK61 1670 aaKnown RBP9.47□□□□□ -0.89
USP33-208ENST00000477949 TTC21BQ7Z4L5 1316 aa9.47□□□□□ -0.89
USP33-208ENST00000477949 CNTNAP5Q8WYK1 1306 aa9.47□□□□□ -0.89
USP33-208ENST00000477949 LTN1O94822 1766 aa9.47□□□□□ -0.89
USP33-208ENST00000477949 ESYT1Q9BSJ8 1104 aa9.46□□□□□ -0.9
USP33-208ENST00000477949 NUCKS1Q9H1E3 243 aaKnown RBP9.46□□□□□ -0.9
USP33-208ENST00000477949 CCNL1Q9UK58 526 aaPredicted RBP9.46□□□□□ -0.9
USP33-208ENST00000477949 C4BP0C0L5 1744 aa9.45□□□□□ -0.9
USP33-208ENST00000477949 APBB1O00213 710 aa9.45□□□□□ -0.9
USP33-208ENST00000477949 CENPCQ03188 943 aa9.45□□□□□ -0.9
USP33-208ENST00000477949 PODNQ7Z5L7 613 aa9.45□□□□□ -0.9
USP33-208ENST00000477949 MTMR14Q8NCE2 650 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms