RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 MED23Q9ULK4 1368 aa15.07■□□□□ 0
CPSF7-211ENST00000477890 CCT4P50991 539 aaKnown RBP15.06■□□□□ 0
CPSF7-211ENST00000477890 FBXW7Q969H0 707 aa15.06■□□□□ 0
CPSF7-211ENST00000477890 H7C1W4 665 aa15.05■□□□□ -0
CPSF7-211ENST00000477890 SLC10A3P09131 477 aa15.05■□□□□ -0
CPSF7-211ENST00000477890 IGHMBP2P38935 993 aaKnown RBP15.05■□□□□ -0
CPSF7-211ENST00000477890 ZNF646O15015 1829 aaPredicted RBP15.04■□□□□ -0
CPSF7-211ENST00000477890 PITPNM2Q9BZ72 1349 aa15.04■□□□□ -0
CPSF7-211ENST00000477890 MXD3Q9BW11 206 aa15.04■□□□□ -0
CPSF7-211ENST00000477890 RNF186Q9NXI6 227 aa15.04■□□□□ -0
CPSF7-211ENST00000477890 SAGE1Q9NXZ1 904 aa15.04■□□□□ -0
CPSF7-211ENST00000477890 SCAF8Q9UPN6 1271 aaKnown RBP15.04■□□□□ -0
CPSF7-211ENST00000477890 PAPPA2Q9BXP8 1791 aa15.03■□□□□ -0
CPSF7-211ENST00000477890 IL16Q14005 1332 aa15.03■□□□□ -0
CPSF7-211ENST00000477890 TRPA1O75762 1119 aa15.03■□□□□ -0
CPSF7-211ENST00000477890 ITGA6P23229 1130 aa15.03■□□□□ -0
CPSF7-211ENST00000477890 MLLT1Q03111 559 aaPredicted RBP15.03■□□□□ -0
CPSF7-211ENST00000477890 FLIIQ13045 1269 aa15.03■□□□□ -0
CPSF7-211ENST00000477890 GCKRQ14397 625 aa15.03■□□□□ -0
CPSF7-211ENST00000477890 NBPF9Q3BBW0 867 aa15.03■□□□□ -0
CPSF7-211ENST00000477890 DACT2Q5SW24 774 aa15.03■□□□□ -0
CPSF7-211ENST00000477890 TXNRD3Q86VQ6 643 aa15.03■□□□□ -0
CPSF7-211ENST00000477890 OGFOD1Q8N543 542 aa15.03■□□□□ -0
CPSF7-211ENST00000477890 COA1Q9GZY4 146 aa15.03■□□□□ -0
CPSF7-211ENST00000477890 LEMD3Q9Y2U8 911 aa15.03■□□□□ -0
CPSF7-211ENST00000477890 CACNA1FO60840 1977 aa15.03■□□□□ -0
CPSF7-211ENST00000477890 FKBP1BP68106 108 aa15.02■□□□□ -0
CPSF7-211ENST00000477890 FKBP5Q13451 457 aaPredicted RBP15.02■□□□□ -0
CPSF7-211ENST00000477890 STRIP1Q5VSL9 837 aa15.02■□□□□ -0
CPSF7-211ENST00000477890 PRAMEF18Q5VWM3 479 aa15.02■□□□□ -0
CPSF7-211ENST00000477890 RASAL3Q86YV0 1011 aa15.02■□□□□ -0
CPSF7-211ENST00000477890 CSRNP1Q96S65 589 aa15.02■□□□□ -0
CPSF7-211ENST00000477890 MPHOSPH8Q99549 860 aa15.02■□□□□ -0
CPSF7-211ENST00000477890 PLA2G12BQ9BX93 195 aa15.02■□□□□ -0
CPSF7-211ENST00000477890 MYH16Q9H6N6 1097 aa15.02■□□□□ -0
CPSF7-211ENST00000477890 ZNF804BA4D1E1 1349 aa15.01□□□□□ -0.01
CPSF7-211ENST00000477890 MYO3BQ8WXR4 1341 aa15.01□□□□□ -0.01
CPSF7-211ENST00000477890 FANCIQ9NVI1 1328 aa15.01□□□□□ -0.01
CPSF7-211ENST00000477890 RGS19P49795 217 aa15.01□□□□□ -0.01
CPSF7-211ENST00000477890 CASP7P55210 303 aa15.01□□□□□ -0.01
CPSF7-211ENST00000477890 MOB2Q70IA6 237 aa15.01□□□□□ -0.01
CPSF7-211ENST00000477890 DNAAF4Q8WXU2 420 aa15.01□□□□□ -0.01
CPSF7-211ENST00000477890 ANKRD2Q9GZV1 360 aa15.01□□□□□ -0.01
CPSF7-211ENST00000477890 WNT10BO00744 389 aa15□□□□□ -0.01
CPSF7-211ENST00000477890 KLRK1P26718 216 aa15□□□□□ -0.01
CPSF7-211ENST00000477890 KCNJ4P48050 445 aa15□□□□□ -0.01
CPSF7-211ENST00000477890 TTLL5Q6EMB2 1281 aa15□□□□□ -0.01
CPSF7-211ENST00000477890 REM2Q8IYK8 340 aaPredicted RBP15□□□□□ -0.01
CPSF7-211ENST00000477890 SALL2Q9Y467 1007 aaPredicted RBP15□□□□□ -0.01
CPSF7-211ENST00000477890 UBE2Q2LH0YL09 131 aa14.99□□□□□ -0.01
CPSF7-211ENST00000477890 SASH1O94885 1247 aa14.99□□□□□ -0.01
CPSF7-211ENST00000477890 CSF1RP07333 972 aa14.99□□□□□ -0.01
CPSF7-211ENST00000477890 CHRNDQ07001 517 aa14.99□□□□□ -0.01
CPSF7-211ENST00000477890 TTLL12Q14166 644 aaPredicted RBP14.99□□□□□ -0.01
CPSF7-211ENST00000477890 NCBP3Q53F19 620 aaKnown RBP14.99□□□□□ -0.01
CPSF7-211ENST00000477890 LINS1Q8NG48 757 aa14.99□□□□□ -0.01
CPSF7-211ENST00000477890 MRS2Q9HD23 443 aa14.99□□□□□ -0.01
CPSF7-211ENST00000477890 ANKRD18BA2A2Z9 1011 aa14.98□□□□□ -0.01
CPSF7-211ENST00000477890 VAMP4O75379 141 aa14.98□□□□□ -0.01
CPSF7-211ENST00000477890 NF2P35240 595 aa14.98□□□□□ -0.01
CPSF7-211ENST00000477890 GTF2IP78347 998 aa14.98□□□□□ -0.01
CPSF7-211ENST00000477890 KIAA0825Q8IV33 1275 aa14.98□□□□□ -0.01
CPSF7-211ENST00000477890 HDAC9Q9UKV0 1011 aa14.98□□□□□ -0.01
CPSF7-211ENST00000477890 MMP14P50281 582 aa14.97□□□□□ -0.01
CPSF7-211ENST00000477890 EXOSC9Q06265 439 aaKnown RBP14.97□□□□□ -0.01
CPSF7-211ENST00000477890 CHMP3Q9Y3E7 222 aa14.97□□□□□ -0.01
CPSF7-211ENST00000477890 A0A1B0GUL6 1792 aa14.96□□□□□ -0.01
CPSF7-211ENST00000477890 F6X3S4 739 aa14.96□□□□□ -0.01
CPSF7-211ENST00000477890 TAF5LO75529 589 aa14.96□□□□□ -0.01
CPSF7-211ENST00000477890 WDR63Q8IWG1 891 aa14.96□□□□□ -0.01
CPSF7-211ENST00000477890 HELBQ8NG08 1087 aaPredicted RBP14.96□□□□□ -0.01
CPSF7-211ENST00000477890 CD209Q9NNX6 404 aa14.96□□□□□ -0.01
CPSF7-211ENST00000477890 SNAP23O00161 211 aa14.95□□□□□ -0.02
CPSF7-211ENST00000477890 MKRN3Q13064 507 aaKnown RBP14.95□□□□□ -0.02
CPSF7-211ENST00000477890 IFIT5Q13325 482 aaKnown RBP14.95□□□□□ -0.02
CPSF7-211ENST00000477890 PRKG1Q13976 671 aa14.95□□□□□ -0.02
CPSF7-211ENST00000477890 CTU1Q7Z7A3 348 aaKnown RBP14.95□□□□□ -0.02
CPSF7-211ENST00000477890 APOBEC3FQ8IUX4 373 aaKnown RBP14.95□□□□□ -0.02
CPSF7-211ENST00000477890 ANP32CO43423 234 aa14.94□□□□□ -0.02
CPSF7-211ENST00000477890 FOXO4P98177 505 aa14.94□□□□□ -0.02
CPSF7-211ENST00000477890 BEND3Q5T5X7 828 aa14.94□□□□□ -0.02
CPSF7-211ENST00000477890 ARMC9Q7Z3E5 817 aa14.94□□□□□ -0.02
CPSF7-211ENST00000477890 ZBED3Q96IU2 234 aaPredicted RBP14.94□□□□□ -0.02
CPSF7-211ENST00000477890 IRS2Q9Y4H2 1338 aa14.93□□□□□ -0.02
CPSF7-211ENST00000477890 TBC1D8O95759 1140 aa14.93□□□□□ -0.02
CPSF7-211ENST00000477890 PTPN12Q05209 780 aaKnown RBP14.93□□□□□ -0.02
CPSF7-211ENST00000477890 DLGAP5Q15398 846 aa14.93□□□□□ -0.02
CPSF7-211ENST00000477890 ECM29Q5VYK3 1845 aa14.93□□□□□ -0.02
CPSF7-211ENST00000477890 F8W031 263 aaPredicted RBP14.92□□□□□ -0.02
CPSF7-211ENST00000477890 TM4SF4P48230 202 aa14.92□□□□□ -0.02
CPSF7-211ENST00000477890 SOX10P56693 466 aa14.92□□□□□ -0.02
CPSF7-211ENST00000477890 LMBR1LQ6UX01 489 aa14.92□□□□□ -0.02
CPSF7-211ENST00000477890 C15orf52Q6ZUT6 534 aaKnown RBP14.92□□□□□ -0.02
CPSF7-211ENST00000477890 ZNF804AQ7Z570 1209 aa14.92□□□□□ -0.02
CPSF7-211ENST00000477890 CERS5Q8N5B7 392 aa14.92□□□□□ -0.02
CPSF7-211ENST00000477890 SPINK5Q9NQ38 1064 aaPredicted RBP14.92□□□□□ -0.02
CPSF7-211ENST00000477890 ANGEL1Q9UNK9 670 aaKnown RBP14.92□□□□□ -0.02
CPSF7-211ENST00000477890 COL1A1P02452 1464 aaPredicted RBP14.91□□□□□ -0.02
CPSF7-211ENST00000477890 PLIN1O60240 522 aa14.91□□□□□ -0.02
CPSF7-211ENST00000477890 SREBF2Q12772 1141 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms