RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 PTPN12Q05209 780 aaKnown RBP26.25■■□□□ 1.79
PDLIM1-202ENST00000477757 ARMC9Q7Z3E5 817 aa26.24■■□□□ 1.79
PDLIM1-202ENST00000477757 MXD3Q9BW11 206 aa26.24■■□□□ 1.79
PDLIM1-202ENST00000477757 PHAXQ9H814 394 aaKnown RBP26.24■■□□□ 1.79
PDLIM1-202ENST00000477757 CWC25Q9NXE8 425 aaPredicted RBP26.24■■□□□ 1.79
PDLIM1-202ENST00000477757 LAMB1P07942 1786 aa26.23■■□□□ 1.79
PDLIM1-202ENST00000477757 RBBP6Q7Z6E9 1792 aaKnown RBP26.23■■□□□ 1.79
PDLIM1-202ENST00000477757 WTIPA6NIX2 430 aaPredicted RBP26.23■■□□□ 1.79
PDLIM1-202ENST00000477757 SASH1O94885 1247 aa26.23■■□□□ 1.79
PDLIM1-202ENST00000477757 ALDH1A1P00352 501 aa26.23■■□□□ 1.79
PDLIM1-202ENST00000477757 MMP14P50281 582 aa26.23■■□□□ 1.79
PDLIM1-202ENST00000477757 STRIP1Q5VSL9 837 aa26.23■■□□□ 1.79
PDLIM1-202ENST00000477757 SPRYD7Q5W111 196 aa26.23■■□□□ 1.79
PDLIM1-202ENST00000477757 CDC5LQ99459 802 aaKnown RBP26.23■■□□□ 1.79
PDLIM1-202ENST00000477757 SPEF2Q9C093 1822 aa26.23■■□□□ 1.79
PDLIM1-202ENST00000477757 COL1A1P02452 1464 aaPredicted RBP26.23■■□□□ 1.79
PDLIM1-202ENST00000477757 CENPFP49454 3210 aa26.22■■□□□ 1.79
PDLIM1-202ENST00000477757 RALBP1Q15311 655 aa26.22■■□□□ 1.79
PDLIM1-202ENST00000477757 HABP4Q5JVS0 413 aaKnown RBP26.22■■□□□ 1.79
PDLIM1-202ENST00000477757 LDLRAD1Q5T700 205 aa26.22■■□□□ 1.79
PDLIM1-202ENST00000477757 APOBEC3FQ8IUX4 373 aaKnown RBP26.22■■□□□ 1.79
PDLIM1-202ENST00000477757 RUNDC1Q96C34 613 aa26.22■■□□□ 1.79
PDLIM1-202ENST00000477757 MBIPQ9NS73 344 aa26.22■■□□□ 1.79
PDLIM1-202ENST00000477757 CTSWP56202 376 aa26.21■■□□□ 1.79
PDLIM1-202ENST00000477757 JARID2Q92833 1246 aaPredicted RBP26.21■■□□□ 1.79
PDLIM1-202ENST00000477757 FBXW7Q969H0 707 aa26.2■■□□□ 1.78
PDLIM1-202ENST00000477757 BSDC1Q9NW68 430 aaPredicted RBP26.2■■□□□ 1.78
PDLIM1-202ENST00000477757 PRKG1Q13976 671 aa26.19■■□□□ 1.78
PDLIM1-202ENST00000477757 COA1Q9GZY4 146 aa26.19■■□□□ 1.78
PDLIM1-202ENST00000477757 MINPP1Q9UNW1 487 aa26.19■■□□□ 1.78
PDLIM1-202ENST00000477757 MYH3P11055 1940 aa26.18■■□□□ 1.78
PDLIM1-202ENST00000477757 CCT4P50991 539 aaKnown RBP26.18■■□□□ 1.78
PDLIM1-202ENST00000477757 INTS3Q68E01 1043 aaKnown RBP26.18■■□□□ 1.78
PDLIM1-202ENST00000477757 METTL22Q9BUU2 404 aaPredicted RBP26.18■■□□□ 1.78
PDLIM1-202ENST00000477757 TRIM17Q9Y577 477 aa26.18■■□□□ 1.78
PDLIM1-202ENST00000477757 BRCA2P51587 3418 aa26.17■■□□□ 1.78
PDLIM1-202ENST00000477757 MANSC4A6NHS7 340 aaPredicted RBP26.17■■□□□ 1.78
PDLIM1-202ENST00000477757 OTOP1Q7RTM1 612 aa26.17■■□□□ 1.78
PDLIM1-202ENST00000477757 ZBED3Q96IU2 234 aaPredicted RBP26.17■■□□□ 1.78
PDLIM1-202ENST00000477757 ANGEL1Q9UNK9 670 aaKnown RBP26.17■■□□□ 1.78
PDLIM1-202ENST00000477757 SSC5DA1L4H1 1573 aa26.16■■□□□ 1.78
PDLIM1-202ENST00000477757 POTEFA5A3E0 1075 aa26.16■■□□□ 1.78
PDLIM1-202ENST00000477757 ZNF853P0CG23 659 aa26.16■■□□□ 1.78
PDLIM1-202ENST00000477757 INHBEP58166 350 aa26.16■■□□□ 1.78
PDLIM1-202ENST00000477757 IFNL1Q8IU54 200 aa26.16■■□□□ 1.78
PDLIM1-202ENST00000477757 TTLL11Q8NHH1 800 aa26.16■■□□□ 1.78
PDLIM1-202ENST00000477757 ZBTB48P10074 688 aaPredicted RBP26.15■■□□□ 1.78
PDLIM1-202ENST00000477757 GREM2Q9H772 168 aa26.15■■□□□ 1.78
PDLIM1-202ENST00000477757 DDX58O95786 925 aaKnown RBP26.14■■□□□ 1.78
PDLIM1-202ENST00000477757 MAP3K11Q16584 847 aa26.14■■□□□ 1.78
PDLIM1-202ENST00000477757 TXNRD3Q86VQ6 643 aa26.14■■□□□ 1.78
PDLIM1-202ENST00000477757 KIAA0825Q8IV33 1275 aa26.14■■□□□ 1.78
PDLIM1-202ENST00000477757 MYBBP1AQ9BQG0 1328 aaKnown RBP26.14■■□□□ 1.77
PDLIM1-202ENST00000477757 IGF2BP3O00425 579 aaKnown RBP eCLIP26.13■■□□□ 1.77
PDLIM1-202ENST00000477757 LEMD3Q9Y2U8 911 aa26.13■■□□□ 1.77
PDLIM1-202ENST00000477757 WDR43Q15061 677 aaKnown RBP eCLIP26.12■■□□□ 1.77
PDLIM1-202ENST00000477757 TTLL5Q6EMB2 1281 aa26.12■■□□□ 1.77
PDLIM1-202ENST00000477757 WNK4Q96J92 1243 aa26.12■■□□□ 1.77
PDLIM1-202ENST00000477757 DEFB129Q9H1M3 183 aa26.12■■□□□ 1.77
PDLIM1-202ENST00000477757 IFT57Q9NWB7 429 aa26.12■■□□□ 1.77
PDLIM1-202ENST00000477757 FZD1Q9UP38 647 aa26.12■■□□□ 1.77
PDLIM1-202ENST00000477757 IGKV5-2P06315 115 aa26.11■■□□□ 1.77
PDLIM1-202ENST00000477757 SLC10A4Q96EP9 437 aa26.11■■□□□ 1.77
PDLIM1-202ENST00000477757 ERO1AQ96HE7 468 aa26.11■■□□□ 1.77
PDLIM1-202ENST00000477757 MAP3K2Q9Y2U5 619 aa26.11■■□□□ 1.77
PDLIM1-202ENST00000477757 ECM29Q5VYK3 1845 aa26.1■■□□□ 1.77
PDLIM1-202ENST00000477757 ELL2O00472 640 aaPredicted RBP26.1■■□□□ 1.77
PDLIM1-202ENST00000477757 KLRK1P26718 216 aa26.1■■□□□ 1.77
PDLIM1-202ENST00000477757 ARMC5Q96C12 935 aa26.1■■□□□ 1.77
PDLIM1-202ENST00000477757 CLMNQ96JQ2 1002 aa26.1■■□□□ 1.77
PDLIM1-202ENST00000477757 PTPN22Q9Y2R2 807 aa26.1■■□□□ 1.77
PDLIM1-202ENST00000477757 PPP2R3BQ9Y5P8 575 aa26.1■■□□□ 1.77
PDLIM1-202ENST00000477757 ZNF804BA4D1E1 1349 aa26.1■■□□□ 1.77
PDLIM1-202ENST00000477757 KIAA0100Q14667 2235 aaKnown RBP26.1■■□□□ 1.77
PDLIM1-202ENST00000477757 UNCXA6NJT0 531 aa26.08■■□□□ 1.77
PDLIM1-202ENST00000477757 GNAI1P63096 354 aa26.08■■□□□ 1.77
PDLIM1-202ENST00000477757 GTF2IP78347 998 aa26.08■■□□□ 1.77
PDLIM1-202ENST00000477757 ADAMTS8Q9UP79 889 aa26.08■■□□□ 1.77
PDLIM1-202ENST00000477757 PPP1R12BO60237 982 aaPredicted RBP26.07■■□□□ 1.76
PDLIM1-202ENST00000477757 IGHMBP2P38935 993 aaKnown RBP26.07■■□□□ 1.76
PDLIM1-202ENST00000477757 DLGAP5Q15398 846 aa26.07■■□□□ 1.76
PDLIM1-202ENST00000477757 MTMR14Q8NCE2 650 aa26.07■■□□□ 1.76
PDLIM1-202ENST00000477757 CD99L2Q8TCZ2 262 aa26.07■■□□□ 1.76
PDLIM1-202ENST00000477757 ANKRD2Q9GZV1 360 aa26.07■■□□□ 1.76
PDLIM1-202ENST00000477757 FXR1P51114 621 aaKnown RBP eCLIP26.06■■□□□ 1.76
PDLIM1-202ENST00000477757 CRHR2Q13324 411 aa26.06■■□□□ 1.76
PDLIM1-202ENST00000477757 CCDC30Q5VVM6 783 aa26.06■■□□□ 1.76
PDLIM1-202ENST00000477757 KSR2Q6VAB6 950 aa26.06■■□□□ 1.76
PDLIM1-202ENST00000477757 C8orf58Q8NAV2 365 aa26.06■■□□□ 1.76
PDLIM1-202ENST00000477757 CHMP4AQ9BY43 222 aa26.06■■□□□ 1.76
PDLIM1-202ENST00000477757 CALD1Q05682 793 aaKnown RBP26.05■■□□□ 1.76
PDLIM1-202ENST00000477757 PI4KAP2A4QPH2 592 aa26.04■■□□□ 1.76
PDLIM1-202ENST00000477757 NEXNQ0ZGT2 675 aa26.04■■□□□ 1.76
PDLIM1-202ENST00000477757 OTUD7BQ6GQQ9 843 aa26.04■■□□□ 1.76
PDLIM1-202ENST00000477757 CERS5Q8N5B7 392 aa26.04■■□□□ 1.76
PDLIM1-202ENST00000477757 PI4KAP1Q8N8J0 262 aa26.04■■□□□ 1.76
PDLIM1-202ENST00000477757 EFCC1Q9HA90 598 aa26.04■■□□□ 1.76
PDLIM1-202ENST00000477757 NEURL1BA8MQ27 555 aa26.03■■□□□ 1.76
PDLIM1-202ENST00000477757 EN2P19622 333 aaPredicted RBP26.03■■□□□ 1.76
PDLIM1-202ENST00000477757 CD209Q9NNX6 404 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms