RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 RCAN3Q9UKA8 241 aa27.97■■■□□ 2.07
SF1-214ENST00000477596 COA1Q9GZY4 146 aa27.96■■■□□ 2.07
SF1-214ENST00000477596 VIL1P09327 827 aaKnown RBP27.95■■■□□ 2.06
SF1-214ENST00000477596 PODNQ7Z5L7 613 aa27.95■■■□□ 2.06
SF1-214ENST00000477596 PNMA8AQ86V59 439 aaPredicted RBP27.95■■■□□ 2.06
SF1-214ENST00000477596 MICALL2Q8IY33 904 aa27.95■■■□□ 2.06
SF1-214ENST00000477596 TRPM4Q8TD43 1214 aa27.95■■■□□ 2.06
SF1-214ENST00000477596 PANK1Q8TE04 598 aa27.95■■■□□ 2.06
SF1-214ENST00000477596 CNOT7Q9UIV1 285 aaKnown RBP27.95■■■□□ 2.06
SF1-214ENST00000477596 CLEC11AQ9Y240 323 aa27.95■■■□□ 2.06
SF1-214ENST00000477596 MROH5Q6ZUA9 1318 aa27.94■■■□□ 2.06
SF1-214ENST00000477596 METTL24Q5JXM2 366 aa27.94■■■□□ 2.06
SF1-214ENST00000477596 C15orf52Q6ZUT6 534 aaKnown RBP27.94■■■□□ 2.06
SF1-214ENST00000477596 ITPRIPQ8IWB1 547 aa27.94■■■□□ 2.06
SF1-214ENST00000477596 VGLL2Q8N8G2 317 aa27.94■■■□□ 2.06
SF1-214ENST00000477596 MXD3Q9BW11 206 aa27.94■■■□□ 2.06
SF1-214ENST00000477596 SIL1Q9H173 461 aa27.94■■■□□ 2.06
SF1-214ENST00000477596 ADARB2Q9NS39 739 aaKnown RBP27.94■■■□□ 2.06
SF1-214ENST00000477596 PA2G4Q9UQ80 394 aaKnown RBP27.94■■■□□ 2.06
SF1-214ENST00000477596 FBXW7Q969H0 707 aa27.93■■■□□ 2.06
SF1-214ENST00000477596 HDAC5Q9UQL6 1122 aa27.93■■■□□ 2.06
SF1-214ENST00000477596 USP17L3A6NCW0 530 aa27.92■■■□□ 2.06
SF1-214ENST00000477596 USP17L4A6NCW7 530 aa27.92■■■□□ 2.06
SF1-214ENST00000477596 EYA2O00167 538 aa27.92■■■□□ 2.06
SF1-214ENST00000477596 MAP1SQ66K74 1059 aaPredicted RBP27.92■■■□□ 2.06
SF1-214ENST00000477596 RSBN1LQ6PCB5 846 aaPredicted RBP27.92■■■□□ 2.06
SF1-214ENST00000477596 USP17L1Q7RTZ2 530 aa27.92■■■□□ 2.06
SF1-214ENST00000477596 EGFRP00533 1210 aa27.91■■■□□ 2.06
SF1-214ENST00000477596 GNAI2P04899 355 aa27.91■■■□□ 2.06
SF1-214ENST00000477596 RPS12P25398 132 aaKnown RBP27.91■■■□□ 2.06
SF1-214ENST00000477596 HTRA3P83110 453 aa27.91■■■□□ 2.06
SF1-214ENST00000477596 USP50Q70EL3 339 aaPredicted RBP27.91■■■□□ 2.06
SF1-214ENST00000477596 ATG9AQ7Z3C6 839 aa27.91■■■□□ 2.06
SF1-214ENST00000477596 DPF2Q92785 391 aa27.91■■■□□ 2.06
SF1-214ENST00000477596 C1orf115Q9H7X2 142 aa27.91■■■□□ 2.06
SF1-214ENST00000477596 CD209Q9NNX6 404 aa27.91■■■□□ 2.06
SF1-214ENST00000477596 CEP350Q5VT06 3117 aa27.91■■■□□ 2.06
SF1-214ENST00000477596 ZNF609O15014 1411 aa27.91■■■□□ 2.06
SF1-214ENST00000477596 HIRAP54198 1017 aaPredicted RBP27.9■■■□□ 2.06
SF1-214ENST00000477596 UBE4AQ14139 1066 aa27.9■■■□□ 2.06
SF1-214ENST00000477596 DACT2Q5SW24 774 aa27.9■■■□□ 2.06
SF1-214ENST00000477596 SAMD7Q7Z3H4 446 aa27.9■■■□□ 2.06
SF1-214ENST00000477596 SRGAP3O43295 1099 aa27.89■■■□□ 2.06
SF1-214ENST00000477596 GYG1P46976 350 aa27.89■■■□□ 2.06
SF1-214ENST00000477596 MTX1Q13505 466 aa27.89■■■□□ 2.06
SF1-214ENST00000477596 GMLQ99445 158 aa27.89■■■□□ 2.06
SF1-214ENST00000477596 H7C1D1 291 aa27.88■■■□□ 2.05
SF1-214ENST00000477596 PDE8BO95263 885 aa27.88■■■□□ 2.05
SF1-214ENST00000477596 TBC1D10BQ4KMP7 808 aaPredicted RBP27.88■■■□□ 2.05
SF1-214ENST00000477596 ZNF804AQ7Z570 1209 aa27.88■■■□□ 2.05
SF1-214ENST00000477596 GTF2IP78347 998 aa27.87■■■□□ 2.05
SF1-214ENST00000477596 JAG2Q9Y219 1238 aa27.87■■■□□ 2.05
SF1-214ENST00000477596 PNMA6EA0A0J9YXQ4 647 aa27.86■■■□□ 2.05
SF1-214ENST00000477596 ZBTB7BO15156 539 aaPredicted RBP27.86■■■□□ 2.05
SF1-214ENST00000477596 ITGBL1O95965 494 aaPredicted RBP27.86■■■□□ 2.05
SF1-214ENST00000477596 APLP1P51693 650 aa27.86■■■□□ 2.05
SF1-214ENST00000477596 RBM26Q5T8P6 1007 aaKnown RBP27.86■■■□□ 2.05
SF1-214ENST00000477596 STRIP1Q5VSL9 837 aa27.86■■■□□ 2.05
SF1-214ENST00000477596 AGBL3Q8NEM8 1001 aa27.86■■■□□ 2.05
SF1-214ENST00000477596 COPRSQ9NQ92 184 aa27.86■■■□□ 2.05
SF1-214ENST00000477596 CIAO1O76071 339 aa27.85■■■□□ 2.05
SF1-214ENST00000477596 IL1R1P14778 569 aa27.85■■■□□ 2.05
SF1-214ENST00000477596 TTLL5Q6EMB2 1281 aa27.85■■■□□ 2.05
SF1-214ENST00000477596 CNTROBQ8N137 903 aa27.85■■■□□ 2.05
SF1-214ENST00000477596 FAM84BQ96KN1 310 aaPredicted RBP27.85■■■□□ 2.05
SF1-214ENST00000477596 PASKQ96RG2 1323 aa27.85■■■□□ 2.05
SF1-214ENST00000477596 FGFR2P21802 821 aa27.84■■■□□ 2.05
SF1-214ENST00000477596 FMR1Q06787 632 aaKnown RBP eCLIP27.83■■■□□ 2.05
SF1-214ENST00000477596 PUM3Q15397 648 aaKnown RBP27.83■■■□□ 2.05
SF1-214ENST00000477596 HIBADHP31937 336 aaKnown RBP27.82■■■□□ 2.04
SF1-214ENST00000477596 ZNF280AP59817 542 aaPredicted RBP27.82■■■□□ 2.04
SF1-214ENST00000477596 KIF4BQ2VIQ3 1234 aa27.82■■■□□ 2.04
SF1-214ENST00000477596 C20orf194Q5TEA3 1177 aa27.82■■■□□ 2.04
SF1-214ENST00000477596 CERS5Q8N5B7 392 aa27.82■■■□□ 2.04
SF1-214ENST00000477596 FBXO3Q9UK99 471 aa27.82■■■□□ 2.04
SF1-214ENST00000477596 COG6Q9Y2V7 657 aa27.82■■■□□ 2.04
SF1-214ENST00000477596 USP17L8P0C7I0 530 aa27.81■■■□□ 2.04
SF1-214ENST00000477596 IQSEC3Q9UPP2 1182 aaPredicted RBP27.81■■■□□ 2.04
SF1-214ENST00000477596 ASTN2O75129 1339 aaPredicted RBP27.81■■■□□ 2.04
SF1-214ENST00000477596 TRAF5O00463 557 aa27.8■■■□□ 2.04
SF1-214ENST00000477596 IL15P40933 162 aaPredicted RBP27.8■■■□□ 2.04
SF1-214ENST00000477596 FBXO33Q7Z6M2 555 aa27.8■■■□□ 2.04
SF1-214ENST00000477596 TDRD7Q8NHU6 1098 aaKnown RBP27.8■■■□□ 2.04
SF1-214ENST00000477596 MYO3BQ8WXR4 1341 aa27.79■■■□□ 2.04
SF1-214ENST00000477596 BCAMP50895 628 aa27.79■■■□□ 2.04
SF1-214ENST00000477596 MVPQ14764 893 aaKnown RBP27.79■■■□□ 2.04
SF1-214ENST00000477596 KIAA0825Q8IV33 1275 aa27.79■■■□□ 2.04
SF1-214ENST00000477596 GLIS2Q9BZE0 524 aaPredicted RBP27.79■■■□□ 2.04
SF1-214ENST00000477596 CEP126Q9P2H0 1117 aa27.79■■■□□ 2.04
SF1-214ENST00000477596 PGAP2Q9UHJ9 254 aa27.79■■■□□ 2.04
SF1-214ENST00000477596 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.79■■■□□ 2.04
SF1-214ENST00000477596 IFIT1P09914 478 aaKnown RBP27.78■■■□□ 2.04
SF1-214ENST00000477596 MS4A1P11836 297 aa27.78■■■□□ 2.04
SF1-214ENST00000477596 ATP2B3Q16720 1220 aa27.78■■■□□ 2.04
SF1-214ENST00000477596 MYOZ2Q9NPC6 264 aa27.78■■■□□ 2.04
SF1-214ENST00000477596 ARAP2Q8WZ64 1704 aa27.78■■■□□ 2.04
SF1-214ENST00000477596 SLC5A1P13866 664 aa27.77■■■□□ 2.04
SF1-214ENST00000477596 POLA2Q14181 598 aa27.77■■■□□ 2.04
SF1-214ENST00000477596 VPS37DQ86XT2 251 aa27.77■■■□□ 2.04
SF1-214ENST00000477596 LPIN2Q92539 896 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms