RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 STK3Q13188 491 aa15.81■□□□□ 0.12
HLA-DMA-208ENST00000477541 TNNI3KQ59H18 835 aa15.81■□□□□ 0.12
HLA-DMA-208ENST00000477541 NSUN7Q8NE18 718 aaKnown RBP15.81■□□□□ 0.12
HLA-DMA-208ENST00000477541 DDX54Q8TDD1 881 aaKnown RBP15.81■□□□□ 0.12
HLA-DMA-208ENST00000477541 ZNF274Q96GC6 653 aaPredicted RBP15.81■□□□□ 0.12
HLA-DMA-208ENST00000477541 TLR7Q9NYK1 1049 aaKnown RBP15.81■□□□□ 0.12
HLA-DMA-208ENST00000477541 FPGT-TNNI3KV9GXZ4 949 aa15.81■□□□□ 0.12
HLA-DMA-208ENST00000477541 AFDNP55196 1824 aaKnown RBP15.81■□□□□ 0.12
HLA-DMA-208ENST00000477541 ZNF609O15014 1411 aa15.81■□□□□ 0.12
HLA-DMA-208ENST00000477541 NEURL1BA8MQ27 555 aa15.8■□□□□ 0.12
HLA-DMA-208ENST00000477541 ATF3P18847 181 aa15.8■□□□□ 0.12
HLA-DMA-208ENST00000477541 SCRN1Q12765 414 aa15.8■□□□□ 0.12
HLA-DMA-208ENST00000477541 SNW1Q13573 536 aaKnown RBP15.8■□□□□ 0.12
HLA-DMA-208ENST00000477541 GCKRQ14397 625 aa15.8■□□□□ 0.12
HLA-DMA-208ENST00000477541 PROSER3Q2NL68 480 aa15.8■□□□□ 0.12
HLA-DMA-208ENST00000477541 RABL6Q3YEC7 729 aaPredicted RBP15.8■□□□□ 0.12
HLA-DMA-208ENST00000477541 C11orf57Q6ZUT1 292 aaPredicted RBP15.8■□□□□ 0.12
HLA-DMA-208ENST00000477541 DHX40Q8IX18 779 aaKnown RBP15.8■□□□□ 0.12
HLA-DMA-208ENST00000477541 NGLY1Q96IV0 654 aa15.8■□□□□ 0.12
HLA-DMA-208ENST00000477541 METTL22Q9BUU2 404 aaPredicted RBP15.8■□□□□ 0.12
HLA-DMA-208ENST00000477541 C5P01031 1676 aa15.8■□□□□ 0.12
HLA-DMA-208ENST00000477541 MYO1BO43795 1136 aa15.8■□□□□ 0.12
HLA-DMA-208ENST00000477541 MPRIPQ6WCQ1 1025 aa15.8■□□□□ 0.12
HLA-DMA-208ENST00000477541 BRINP3Q76B58 766 aa15.8■□□□□ 0.12
HLA-DMA-208ENST00000477541 RIC3Q7Z5B4 369 aa15.8■□□□□ 0.12
HLA-DMA-208ENST00000477541 MRPS27Q92552 414 aaKnown RBP15.8■□□□□ 0.12
HLA-DMA-208ENST00000477541 L2HGDHQ9H9P8 463 aa15.8■□□□□ 0.12
HLA-DMA-208ENST00000477541 GPR108Q9NPR9 543 aa15.8■□□□□ 0.12
HLA-DMA-208ENST00000477541 IGKV5-2P06315 115 aa15.79■□□□□ 0.12
HLA-DMA-208ENST00000477541 CYP21A2P08686 494 aa15.79■□□□□ 0.12
HLA-DMA-208ENST00000477541 FGD1P98174 961 aa15.79■□□□□ 0.12
HLA-DMA-208ENST00000477541 ADALQ6DHV7 355 aa15.79■□□□□ 0.12
HLA-DMA-208ENST00000477541 KBTBD3Q8NAB2 608 aa15.79■□□□□ 0.12
HLA-DMA-208ENST00000477541 TCEANC2Q96MN5 208 aa15.79■□□□□ 0.12
HLA-DMA-208ENST00000477541 RTEL1Q9NZ71 1219 aa15.79■□□□□ 0.12
HLA-DMA-208ENST00000477541 KIF1AQ12756 1690 aa15.78■□□□□ 0.12
HLA-DMA-208ENST00000477541 PTPDC1A2A3K4 754 aa15.78■□□□□ 0.12
HLA-DMA-208ENST00000477541 CCDC66A2RUB6 948 aa15.78■□□□□ 0.12
HLA-DMA-208ENST00000477541 EXOSC10Q01780 885 aaKnown RBP15.78■□□□□ 0.12
HLA-DMA-208ENST00000477541 PDIA6Q15084 440 aa15.78■□□□□ 0.12
HLA-DMA-208ENST00000477541 KCNG4Q8TDN1 519 aa15.78■□□□□ 0.12
HLA-DMA-208ENST00000477541 DBNLQ9UJU6 430 aaKnown RBP15.78■□□□□ 0.12
HLA-DMA-208ENST00000477541 TAF6LQ9Y6J9 622 aa15.78■□□□□ 0.12
HLA-DMA-208ENST00000477541 YEATS4O95619 227 aa15.77■□□□□ 0.12
HLA-DMA-208ENST00000477541 RFX5P48382 616 aaPredicted RBP15.77■□□□□ 0.12
HLA-DMA-208ENST00000477541 EVCP57679 992 aa15.77■□□□□ 0.12
HLA-DMA-208ENST00000477541 ZRSR1Q15695 479 aaKnown RBP15.77■□□□□ 0.12
HLA-DMA-208ENST00000477541 ZNF771Q7L3S4 317 aaPredicted RBP15.77■□□□□ 0.12
HLA-DMA-208ENST00000477541 C14orf37Q86TY3 774 aa15.77■□□□□ 0.12
HLA-DMA-208ENST00000477541 CCDC125Q86Z20 511 aa15.77■□□□□ 0.12
HLA-DMA-208ENST00000477541 C8orf37Q96NL8 207 aa15.77■□□□□ 0.12
HLA-DMA-208ENST00000477541 LRRFIP1Q32MZ4 808 aaKnown RBP15.77■□□□□ 0.11
HLA-DMA-208ENST00000477541 FMR1NBQ8N0W7 255 aaPredicted RBP15.77■□□□□ 0.11
HLA-DMA-208ENST00000477541 FSIP1Q8NA03 581 aa15.77■□□□□ 0.11
HLA-DMA-208ENST00000477541 SRRTQ9BXP5 876 aaKnown RBP15.77■□□□□ 0.11
HLA-DMA-208ENST00000477541 GOLPH3LQ9H4A5 285 aa15.77■□□□□ 0.11
HLA-DMA-208ENST00000477541 ZNF215Q9UL58 517 aaPredicted RBP15.77■□□□□ 0.11
HLA-DMA-208ENST00000477541 LAMB4A4D0S4 1761 aa15.76■□□□□ 0.11
HLA-DMA-208ENST00000477541 ARFGEF2Q9Y6D5 1785 aa15.76■□□□□ 0.11
HLA-DMA-208ENST00000477541 BRAPQ7Z569 592 aa15.76■□□□□ 0.11
HLA-DMA-208ENST00000477541 USP28Q96RU2 1077 aa15.76■□□□□ 0.11
HLA-DMA-208ENST00000477541 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.76■□□□□ 0.11
HLA-DMA-208ENST00000477541 DCCP43146 1447 aa15.75■□□□□ 0.11
HLA-DMA-208ENST00000477541 MST1RQ04912 1400 aa15.75■□□□□ 0.11
HLA-DMA-208ENST00000477541 NHSL1Q5SYE7 1610 aa15.75■□□□□ 0.11
HLA-DMA-208ENST00000477541 DHX16O60231 1041 aaKnown RBP15.75■□□□□ 0.11
HLA-DMA-208ENST00000477541 SLFN14P0C7P3 912 aa15.75■□□□□ 0.11
HLA-DMA-208ENST00000477541 ME1P48163 572 aa15.75■□□□□ 0.11
HLA-DMA-208ENST00000477541 PTPN12Q05209 780 aaKnown RBP15.75■□□□□ 0.11
HLA-DMA-208ENST00000477541 COL9A3Q14050 684 aaPredicted RBP15.75■□□□□ 0.11
HLA-DMA-208ENST00000477541 BMS1Q14692 1282 aaKnown RBP15.75■□□□□ 0.11
HLA-DMA-208ENST00000477541 TERF2Q15554 542 aa15.75■□□□□ 0.11
HLA-DMA-208ENST00000477541 ARHGEF25Q86VW2 580 aa15.75■□□□□ 0.11
HLA-DMA-208ENST00000477541 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.75■□□□□ 0.11
HLA-DMA-208ENST00000477541 ZNF592Q92610 1267 aa15.75■□□□□ 0.11
HLA-DMA-208ENST00000477541 LRRC59Q96AG4 307 aaKnown RBP15.75■□□□□ 0.11
HLA-DMA-208ENST00000477541 SIL1Q9H173 461 aa15.75■□□□□ 0.11
HLA-DMA-208ENST00000477541 POLR3EQ9NVU0 708 aa15.75■□□□□ 0.11
HLA-DMA-208ENST00000477541 DDX60Q8IY21 1712 aaKnown RBP15.75■□□□□ 0.11
HLA-DMA-208ENST00000477541 IKBKBO14920 756 aa15.74■□□□□ 0.11
HLA-DMA-208ENST00000477541 CTDNEP1O95476 244 aa15.74■□□□□ 0.11
HLA-DMA-208ENST00000477541 TPM1P09493 284 aa15.74■□□□□ 0.11
HLA-DMA-208ENST00000477541 KMT5BQ4FZB7 885 aa15.74■□□□□ 0.11
HLA-DMA-208ENST00000477541 FCHSD1Q86WN1 690 aa15.74■□□□□ 0.11
HLA-DMA-208ENST00000477541 AOPEPQ8N6M6 819 aa15.74■□□□□ 0.11
HLA-DMA-208ENST00000477541 DDX11Q96FC9 970 aa15.74■□□□□ 0.11
HLA-DMA-208ENST00000477541 KIAA1468Q9P260 1216 aa15.74■□□□□ 0.11
HLA-DMA-208ENST00000477541 CARMIL3Q8ND23 1372 aa15.74■□□□□ 0.11
HLA-DMA-208ENST00000477541 PHLPP2Q6ZVD8 1323 aa15.74■□□□□ 0.11
HLA-DMA-208ENST00000477541 WDR19Q8NEZ3 1342 aa15.74■□□□□ 0.11
HLA-DMA-208ENST00000477541 SFPQP23246 707 aaKnown RBP eCLIP15.74■□□□□ 0.11
HLA-DMA-208ENST00000477541 ZMYM1Q5SVZ6 1142 aa15.74■□□□□ 0.11
HLA-DMA-208ENST00000477541 TIGD1Q96MW7 591 aa15.74■□□□□ 0.11
HLA-DMA-208ENST00000477541 USP16Q9Y5T5 823 aa15.74■□□□□ 0.11
HLA-DMA-208ENST00000477541 CBFA2T2O43439 604 aa15.73■□□□□ 0.11
HLA-DMA-208ENST00000477541 ATP8B1O43520 1251 aa15.73■□□□□ 0.11
HLA-DMA-208ENST00000477541 H2AFXP16104 143 aaPredicted RBP15.73■□□□□ 0.11
HLA-DMA-208ENST00000477541 NLRP12P59046 1061 aa15.73■□□□□ 0.11
HLA-DMA-208ENST00000477541 TFCP2Q12800 502 aa15.73■□□□□ 0.11
HLA-DMA-208ENST00000477541 ZNF790Q6PG37 636 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms