RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 NBPF9Q3BBW0 867 aa8.62□□□□□ -1.03
RTFDC1-206ENST00000477485 OGFOD1Q8N543 542 aa8.62□□□□□ -1.03
RTFDC1-206ENST00000477485 ZNF296Q8WUU4 475 aaPredicted RBP8.62□□□□□ -1.03
RTFDC1-206ENST00000477485 MXD3Q9BW11 206 aa8.62□□□□□ -1.03
RTFDC1-206ENST00000477485 PCDH10Q9P2E7 1040 aa8.62□□□□□ -1.03
RTFDC1-206ENST00000477485 A0A1B0GUL6 1792 aa8.61□□□□□ -1.03
RTFDC1-206ENST00000477485 PITPNM2Q9BZ72 1349 aa8.61□□□□□ -1.03
RTFDC1-206ENST00000477485 PCCAP05165 728 aaPredicted RBP8.61□□□□□ -1.03
RTFDC1-206ENST00000477485 DDX10Q13206 875 aaKnown RBP8.61□□□□□ -1.03
RTFDC1-206ENST00000477485 TRIM28Q13263 835 aaKnown RBP8.61□□□□□ -1.03
RTFDC1-206ENST00000477485 CCDC191Q8NCU4 936 aa8.61□□□□□ -1.03
RTFDC1-206ENST00000477485 CDC5LQ99459 802 aaKnown RBP8.61□□□□□ -1.03
RTFDC1-206ENST00000477485 ADAMTS8Q9UP79 889 aa8.61□□□□□ -1.03
RTFDC1-206ENST00000477485 KCNJ4P48050 445 aa8.6□□□□□ -1.03
RTFDC1-206ENST00000477485 CTSWP56202 376 aa8.6□□□□□ -1.03
RTFDC1-206ENST00000477485 NEXNQ0ZGT2 675 aa8.6□□□□□ -1.03
RTFDC1-206ENST00000477485 SREBF2Q12772 1141 aa8.6□□□□□ -1.03
RTFDC1-206ENST00000477485 PKN2Q16513 984 aaKnown RBP8.6□□□□□ -1.03
RTFDC1-206ENST00000477485 PRPF38BQ5VTL8 546 aaKnown RBP8.6□□□□□ -1.03
RTFDC1-206ENST00000477485 PODNQ7Z5L7 613 aa8.6□□□□□ -1.03
RTFDC1-206ENST00000477485 MAP3K2Q9Y2U5 619 aa8.6□□□□□ -1.03
RTFDC1-206ENST00000477485 ZNF609O15014 1411 aa8.6□□□□□ -1.03
RTFDC1-206ENST00000477485 MED23Q9ULK4 1368 aa8.6□□□□□ -1.03
RTFDC1-206ENST00000477485 WTIPA6NIX2 430 aaPredicted RBP8.59□□□□□ -1.03
RTFDC1-206ENST00000477485 GPR25O00155 361 aa8.59□□□□□ -1.03
RTFDC1-206ENST00000477485 IGHMBP2P38935 993 aaKnown RBP8.59□□□□□ -1.03
RTFDC1-206ENST00000477485 CCT4P50991 539 aaKnown RBP8.59□□□□□ -1.03
RTFDC1-206ENST00000477485 GNAI1P63096 354 aa8.59□□□□□ -1.03
RTFDC1-206ENST00000477485 CALD1Q05682 793 aaKnown RBP8.59□□□□□ -1.03
RTFDC1-206ENST00000477485 ARMC9Q7Z3E5 817 aa8.59□□□□□ -1.03
RTFDC1-206ENST00000477485 KIAA0825Q8IV33 1275 aa8.59□□□□□ -1.03
RTFDC1-206ENST00000477485 METTL22Q9BUU2 404 aaPredicted RBP8.59□□□□□ -1.03
RTFDC1-206ENST00000477485 ANGEL1Q9UNK9 670 aaKnown RBP8.59□□□□□ -1.03
RTFDC1-206ENST00000477485 OTOFQ9HC10 1997 aa8.59□□□□□ -1.03
RTFDC1-206ENST00000477485 MYO3BQ8WXR4 1341 aa8.58□□□□□ -1.04
RTFDC1-206ENST00000477485 WNT10BO00744 389 aa8.58□□□□□ -1.04
RTFDC1-206ENST00000477485 FKTNO75072 461 aa8.58□□□□□ -1.04
RTFDC1-206ENST00000477485 SLC4A2P04920 1241 aa8.58□□□□□ -1.04
RTFDC1-206ENST00000477485 DACT2Q5SW24 774 aa8.58□□□□□ -1.04
RTFDC1-206ENST00000477485 CCDC30Q5VVM6 783 aa8.58□□□□□ -1.04
RTFDC1-206ENST00000477485 FBXO46Q6PJ61 603 aaPredicted RBP8.58□□□□□ -1.04
RTFDC1-206ENST00000477485 UBE3BQ7Z3V4 1068 aa8.58□□□□□ -1.04
RTFDC1-206ENST00000477485 APOBEC3FQ8IUX4 373 aaKnown RBP8.58□□□□□ -1.04
RTFDC1-206ENST00000477485 GMLQ99445 158 aa8.58□□□□□ -1.04
RTFDC1-206ENST00000477485 STK31Q9BXU1 1019 aa8.58□□□□□ -1.04
RTFDC1-206ENST00000477485 GREM2Q9H772 168 aa8.58□□□□□ -1.04
RTFDC1-206ENST00000477485 IFT57Q9NWB7 429 aa8.58□□□□□ -1.04
RTFDC1-206ENST00000477485 MINPP1Q9UNW1 487 aa8.58□□□□□ -1.04
RTFDC1-206ENST00000477485 FZD1Q9UP38 647 aa8.58□□□□□ -1.04
RTFDC1-206ENST00000477485 CACNA1FO60840 1977 aa8.58□□□□□ -1.04
RTFDC1-206ENST00000477485 LAMB1P07942 1786 aa8.58□□□□□ -1.04
RTFDC1-206ENST00000477485 PI4KAP2A4QPH2 592 aa8.57□□□□□ -1.04
RTFDC1-206ENST00000477485 F8W031 263 aaPredicted RBP8.57□□□□□ -1.04
RTFDC1-206ENST00000477485 APAF1O14727 1248 aa8.57□□□□□ -1.04
RTFDC1-206ENST00000477485 GTF2IP78347 998 aa8.57□□□□□ -1.04
RTFDC1-206ENST00000477485 PTPN12Q05209 780 aaKnown RBP8.57□□□□□ -1.04
RTFDC1-206ENST00000477485 CWF19L2Q2TBE0 894 aaKnown RBP8.57□□□□□ -1.04
RTFDC1-206ENST00000477485 STRIP1Q5VSL9 837 aa8.57□□□□□ -1.04
RTFDC1-206ENST00000477485 TTLL5Q6EMB2 1281 aa8.57□□□□□ -1.04
RTFDC1-206ENST00000477485 PI4KAP1Q8N8J0 262 aa8.57□□□□□ -1.04
RTFDC1-206ENST00000477485 C8orf58Q8NAV2 365 aa8.57□□□□□ -1.04
RTFDC1-206ENST00000477485 TTLL11Q8NHH1 800 aa8.57□□□□□ -1.04
RTFDC1-206ENST00000477485 MPHOSPH8Q99549 860 aa8.57□□□□□ -1.04
RTFDC1-206ENST00000477485 COA1Q9GZY4 146 aa8.57□□□□□ -1.04
RTFDC1-206ENST00000477485 BSDC1Q9NW68 430 aaPredicted RBP8.57□□□□□ -1.04
RTFDC1-206ENST00000477485 CHMP3Q9Y3E7 222 aa8.57□□□□□ -1.04
RTFDC1-206ENST00000477485 TRIM17Q9Y577 477 aa8.57□□□□□ -1.04
RTFDC1-206ENST00000477485 RBBP6Q7Z6E9 1792 aaKnown RBP8.57□□□□□ -1.04
RTFDC1-206ENST00000477485 ZNF804BA4D1E1 1349 aa8.56□□□□□ -1.04
RTFDC1-206ENST00000477485 KLRK1P26718 216 aa8.56□□□□□ -1.04
RTFDC1-206ENST00000477485 TM4SF4P48230 202 aa8.56□□□□□ -1.04
RTFDC1-206ENST00000477485 DLGAP5Q15398 846 aa8.56□□□□□ -1.04
RTFDC1-206ENST00000477485 KSR2Q6VAB6 950 aa8.56□□□□□ -1.04
RTFDC1-206ENST00000477485 TXNRD3Q86VQ6 643 aa8.56□□□□□ -1.04
RTFDC1-206ENST00000477485 SLC10A4Q96EP9 437 aa8.56□□□□□ -1.04
RTFDC1-206ENST00000477485 CHMP4AQ9BY43 222 aa8.56□□□□□ -1.04
RTFDC1-206ENST00000477485 VEZTQ9HBM0 779 aa8.56□□□□□ -1.04
RTFDC1-206ENST00000477485 ARAP2Q8WZ64 1704 aa8.55□□□□□ -1.04
RTFDC1-206ENST00000477485 MYO1BO43795 1136 aa8.55□□□□□ -1.04
RTFDC1-206ENST00000477485 PPP1R12BO60237 982 aaPredicted RBP8.55□□□□□ -1.04
RTFDC1-206ENST00000477485 ALDH1A1P00352 501 aa8.55□□□□□ -1.04
RTFDC1-206ENST00000477485 IGKV5-2P06315 115 aa8.55□□□□□ -1.04
RTFDC1-206ENST00000477485 ZNF853P0CG23 659 aa8.55□□□□□ -1.04
RTFDC1-206ENST00000477485 ITGA6P23229 1130 aa8.55□□□□□ -1.04
RTFDC1-206ENST00000477485 RBM5P52756 815 aaKnown RBP eCLIP8.55□□□□□ -1.04
RTFDC1-206ENST00000477485 SPRYD7Q5W111 196 aa8.55□□□□□ -1.04
RTFDC1-206ENST00000477485 TSR2Q969E8 191 aaKnown RBP8.55□□□□□ -1.04
RTFDC1-206ENST00000477485 ANKRD2Q9GZV1 360 aa8.55□□□□□ -1.04
RTFDC1-206ENST00000477485 R3HDMLQ9H3Y0 253 aa8.55□□□□□ -1.04
RTFDC1-206ENST00000477485 JAG2Q9Y219 1238 aa8.55□□□□□ -1.04
RTFDC1-206ENST00000477485 LEMD3Q9Y2U8 911 aa8.55□□□□□ -1.04
RTFDC1-206ENST00000477485 COL1A1P02452 1464 aaPredicted RBP8.55□□□□□ -1.04
RTFDC1-206ENST00000477485 AK9Q5TCS8 1911 aa8.54□□□□□ -1.04
RTFDC1-206ENST00000477485 MYH13Q9UKX3 1938 aa8.54□□□□□ -1.04
RTFDC1-206ENST00000477485 CLRN2A0PK11 232 aa8.54□□□□□ -1.04
RTFDC1-206ENST00000477485 MANSC4A6NHS7 340 aaPredicted RBP8.54□□□□□ -1.04
RTFDC1-206ENST00000477485 NEURL1BA8MQ27 555 aa8.54□□□□□ -1.04
RTFDC1-206ENST00000477485 PLIN1O60240 522 aa8.54□□□□□ -1.04
RTFDC1-206ENST00000477485 TSPYL6Q8N831 410 aa8.54□□□□□ -1.04
RTFDC1-206ENST00000477485 HELBQ8NG08 1087 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms