RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 PDE8BO95263 885 aa15.42■□□□□ 0.06
CLCNKA-205ENST00000477360 GMPSP49915 693 aaPredicted RBP15.42■□□□□ 0.06
CLCNKA-205ENST00000477360 FKBP1AP62942 108 aaKnown RBP15.42■□□□□ 0.06
CLCNKA-205ENST00000477360 USP17L1Q7RTZ2 530 aa15.42■□□□□ 0.06
CLCNKA-205ENST00000477360 ZNF804AQ7Z570 1209 aa15.42■□□□□ 0.06
CLCNKA-205ENST00000477360 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.42■□□□□ 0.06
CLCNKA-205ENST00000477360 ZNF594Q96JF6 807 aaPredicted RBP15.42■□□□□ 0.06
CLCNKA-205ENST00000477360 H7C1D1 291 aa15.41■□□□□ 0.06
CLCNKA-205ENST00000477360 IL1R1P14778 569 aa15.41■□□□□ 0.06
CLCNKA-205ENST00000477360 IL15P40933 162 aaPredicted RBP15.41■□□□□ 0.06
CLCNKA-205ENST00000477360 APLP1P51693 650 aa15.41■□□□□ 0.06
CLCNKA-205ENST00000477360 PDE3AQ14432 1141 aa15.41■□□□□ 0.06
CLCNKA-205ENST00000477360 DOK7Q18PE1 504 aa15.41■□□□□ 0.06
CLCNKA-205ENST00000477360 RSBN1LQ6PCB5 846 aaPredicted RBP15.41■□□□□ 0.06
CLCNKA-205ENST00000477360 VGLL2Q8N8G2 317 aa15.41■□□□□ 0.06
CLCNKA-205ENST00000477360 CLUAP1Q96AJ1 413 aa15.41■□□□□ 0.06
CLCNKA-205ENST00000477360 PGAP2Q9UHJ9 254 aa15.41■□□□□ 0.06
CLCNKA-205ENST00000477360 ADAMTSL1Q8N6G6 1762 aa15.4■□□□□ 0.06
CLCNKA-205ENST00000477360 ZBTB7BO15156 539 aaPredicted RBP15.4■□□□□ 0.06
CLCNKA-205ENST00000477360 METTL24Q5JXM2 366 aa15.4■□□□□ 0.06
CLCNKA-205ENST00000477360 GPR101Q96P66 508 aaPredicted RBP15.4■□□□□ 0.06
CLCNKA-205ENST00000477360 GMLQ99445 158 aa15.4■□□□□ 0.06
CLCNKA-205ENST00000477360 CNOT7Q9UIV1 285 aaKnown RBP15.4■□□□□ 0.06
CLCNKA-205ENST00000477360 TAF5LO75529 589 aa15.39■□□□□ 0.05
CLCNKA-205ENST00000477360 EPS15P42566 896 aa15.39■□□□□ 0.05
CLCNKA-205ENST00000477360 ZNF280AP59817 542 aaPredicted RBP15.39■□□□□ 0.05
CLCNKA-205ENST00000477360 PUM3Q15397 648 aaKnown RBP15.39■□□□□ 0.05
CLCNKA-205ENST00000477360 DACT2Q5SW24 774 aa15.39■□□□□ 0.05
CLCNKA-205ENST00000477360 PUS3Q9BZE2 481 aaKnown RBP15.39■□□□□ 0.05
CLCNKA-205ENST00000477360 CD209Q9NNX6 404 aa15.39■□□□□ 0.05
CLCNKA-205ENST00000477360 SRGAP3O43295 1099 aa15.38■□□□□ 0.05
CLCNKA-205ENST00000477360 SASH1O94885 1247 aa15.38■□□□□ 0.05
CLCNKA-205ENST00000477360 ATG9AQ7Z3C6 839 aa15.38■□□□□ 0.05
CLCNKA-205ENST00000477360 TXNRD3Q86VQ6 643 aa15.38■□□□□ 0.05
CLCNKA-205ENST00000477360 HELBQ8NG08 1087 aaPredicted RBP15.38■□□□□ 0.05
CLCNKA-205ENST00000477360 DDX19BQ9UMR2 479 aa15.38■□□□□ 0.05
CLCNKA-205ENST00000477360 PSME4Q14997 1843 aa15.38■□□□□ 0.05
CLCNKA-205ENST00000477360 SPEF2Q9C093 1822 aa15.38■□□□□ 0.05
CLCNKA-205ENST00000477360 WTIPA6NIX2 430 aaPredicted RBP15.37■□□□□ 0.05
CLCNKA-205ENST00000477360 RLBP1P12271 317 aa15.37■□□□□ 0.05
CLCNKA-205ENST00000477360 FGFR2P21802 821 aa15.37■□□□□ 0.05
CLCNKA-205ENST00000477360 LRRC24Q50LG9 513 aa15.37■□□□□ 0.05
CLCNKA-205ENST00000477360 CAVIN4Q5BKX8 364 aa15.37■□□□□ 0.05
CLCNKA-205ENST00000477360 ITPRIPQ8IWB1 547 aa15.37■□□□□ 0.05
CLCNKA-205ENST00000477360 MICALL2Q8IY33 904 aa15.37■□□□□ 0.05
CLCNKA-205ENST00000477360 TDRD7Q8NHU6 1098 aaKnown RBP15.37■□□□□ 0.05
CLCNKA-205ENST00000477360 LPIN2Q92539 896 aa15.37■□□□□ 0.05
CLCNKA-205ENST00000477360 TNNQ9UQP3 1299 aa15.37■□□□□ 0.05
CLCNKA-205ENST00000477360 FAM205AQ6ZU69 1335 aa15.37■□□□□ 0.05
CLCNKA-205ENST00000477360 A0A1B0GUL6 1792 aa15.36■□□□□ 0.05
CLCNKA-205ENST00000477360 ITGBL1O95965 494 aaPredicted RBP15.36■□□□□ 0.05
CLCNKA-205ENST00000477360 IFIT1P09914 478 aaKnown RBP15.36■□□□□ 0.05
CLCNKA-205ENST00000477360 USP17L8P0C7I0 530 aa15.36■□□□□ 0.05
CLCNKA-205ENST00000477360 HIBADHP31937 336 aaKnown RBP15.36■□□□□ 0.05
CLCNKA-205ENST00000477360 EAPPQ56P03 285 aaPredicted RBP15.36■□□□□ 0.05
CLCNKA-205ENST00000477360 TTLL5Q6EMB2 1281 aa15.36■□□□□ 0.05
CLCNKA-205ENST00000477360 FBXO33Q7Z6M2 555 aa15.36■□□□□ 0.05
CLCNKA-205ENST00000477360 OGFOD1Q8N543 542 aa15.36■□□□□ 0.05
CLCNKA-205ENST00000477360 SSH3Q8TE77 659 aa15.36■□□□□ 0.05
CLCNKA-205ENST00000477360 FAM84BQ96KN1 310 aaPredicted RBP15.36■□□□□ 0.05
CLCNKA-205ENST00000477360 KCNQ5Q9NR82 932 aa15.36■□□□□ 0.05
CLCNKA-205ENST00000477360 CEP126Q9P2H0 1117 aa15.36■□□□□ 0.05
CLCNKA-205ENST00000477360 PASKQ96RG2 1323 aa15.36■□□□□ 0.05
CLCNKA-205ENST00000477360 SCN9AQ15858 1988 aa15.35■□□□□ 0.05
CLCNKA-205ENST00000477360 PLIN1O60240 522 aa15.35■□□□□ 0.05
CLCNKA-205ENST00000477360 KLRK1P26718 216 aa15.35■□□□□ 0.05
CLCNKA-205ENST00000477360 ATP8B2P98198 1209 aa15.35■□□□□ 0.05
CLCNKA-205ENST00000477360 MVPQ14764 893 aaKnown RBP15.35■□□□□ 0.05
CLCNKA-205ENST00000477360 KLHDC4Q8TBB5 520 aa15.35■□□□□ 0.05
CLCNKA-205ENST00000477360 AKAP2Q9Y2D5 859 aa15.35■□□□□ 0.05
CLCNKA-205ENST00000477360 ZBTB12Q9Y330 459 aaPredicted RBP15.35■□□□□ 0.05
CLCNKA-205ENST00000477360 POTEIP0CG38 1075 aa15.34■□□□□ 0.05
CLCNKA-205ENST00000477360 POTEJP0CG39 1038 aa15.34■□□□□ 0.05
CLCNKA-205ENST00000477360 SLC5A1P13866 664 aa15.34■□□□□ 0.05
CLCNKA-205ENST00000477360 POLA2Q14181 598 aa15.34■□□□□ 0.05
CLCNKA-205ENST00000477360 CNTROBQ8N137 903 aa15.34■□□□□ 0.05
CLCNKA-205ENST00000477360 CLEC11AQ9Y240 323 aa15.34■□□□□ 0.05
CLCNKA-205ENST00000477360 SNAP23O00161 211 aa15.33■□□□□ 0.04
CLCNKA-205ENST00000477360 SEMA3EO15041 775 aa15.33■□□□□ 0.04
CLCNKA-205ENST00000477360 MTMR14Q8NCE2 650 aa15.33■□□□□ 0.04
CLCNKA-205ENST00000477360 TBC1D22AQ8WUA7 517 aa15.33■□□□□ 0.04
CLCNKA-205ENST00000477360 HDAC9Q9UKV0 1011 aa15.33■□□□□ 0.04
CLCNKA-205ENST00000477360 NOP58Q9Y2X3 529 aaKnown RBP15.33■□□□□ 0.04
CLCNKA-205ENST00000477360 SUGT1Q9Y2Z0 365 aa15.33■□□□□ 0.04
CLCNKA-205ENST00000477360 PITPNM2Q9BZ72 1349 aa15.33■□□□□ 0.04
CLCNKA-205ENST00000477360 HIRAP54198 1017 aaPredicted RBP15.32■□□□□ 0.04
CLCNKA-205ENST00000477360 GTF2IP78347 998 aa15.32■□□□□ 0.04
CLCNKA-205ENST00000477360 ATP2B3Q16720 1220 aa15.32■□□□□ 0.04
CLCNKA-205ENST00000477360 CDC37L1Q7L3B6 337 aa15.32■□□□□ 0.04
CLCNKA-205ENST00000477360 VPS37DQ86XT2 251 aa15.32■□□□□ 0.04
CLCNKA-205ENST00000477360 RPAP2Q8IXW5 612 aaPredicted RBP15.32■□□□□ 0.04
CLCNKA-205ENST00000477360 PANK1Q8TE04 598 aa15.32■□□□□ 0.04
CLCNKA-205ENST00000477360 MYOZ2Q9NPC6 264 aa15.32■□□□□ 0.04
CLCNKA-205ENST00000477360 GPR108Q9NPR9 543 aa15.32■□□□□ 0.04
CLCNKA-205ENST00000477360 CREBZFQ9NS37 354 aa15.32■□□□□ 0.04
CLCNKA-205ENST00000477360 ZBTB40Q9NUA8 1239 aa15.32■□□□□ 0.04
CLCNKA-205ENST00000477360 PNMA6EA0A0J9YXQ4 647 aa15.31■□□□□ 0.04
CLCNKA-205ENST00000477360 KIF4BQ2VIQ3 1234 aa15.31■□□□□ 0.04
CLCNKA-205ENST00000477360 MRIQ9BWK5 157 aa15.31■□□□□ 0.04
CLCNKA-205ENST00000477360 GNL3LQ9NVN8 582 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms